RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 ERICH1Q86X53 443 aa11.45□□□□□ -0.58
TARDBP-230ENST00000639083 SLC13A5Q86YT5 568 aaPredicted RBP11.45□□□□□ -0.58
TARDBP-230ENST00000639083 TMEM176AQ96HP8 235 aa11.45□□□□□ -0.58
TARDBP-230ENST00000639083 KATNAL1Q9BW62 490 aa11.45□□□□□ -0.58
TARDBP-230ENST00000639083 ELOVL4Q9GZR5 314 aa11.45□□□□□ -0.58
TARDBP-230ENST00000639083 NXF3Q9H4D5 531 aaKnown RBP11.45□□□□□ -0.58
TARDBP-230ENST00000639083 PLEKHA5Q9HAU0 1116 aa11.45□□□□□ -0.58
TARDBP-230ENST00000639083 PIN4Q9Y237 131 aaKnown RBP11.45□□□□□ -0.58
TARDBP-230ENST00000639083 CEP83Q9Y592 693 aa11.45□□□□□ -0.58
TARDBP-230ENST00000639083 PGK1P00558 417 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 CALB1P05937 261 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 PAEPP09466 180 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 P4HA1P13674 534 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 CDH5P33151 784 aaPredicted RBP11.44□□□□□ -0.58
TARDBP-230ENST00000639083 FLT3LGP49771 235 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 YARSP54577 528 aaKnown RBP11.44□□□□□ -0.58
TARDBP-230ENST00000639083 PCBP1Q15365 356 aaKnown RBP eCLIP11.44□□□□□ -0.58
TARDBP-230ENST00000639083 GLRA4Q5JXX5 417 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 CYP4A22Q5TCH4 519 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 CYP4F22Q6NT55 531 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 APBB1IPQ7Z5R6 666 aaPredicted RBP11.44□□□□□ -0.58
TARDBP-230ENST00000639083 NT5DC4Q86YG4 428 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 TSEN2Q8NCE0 465 aaKnown RBP11.44□□□□□ -0.58
TARDBP-230ENST00000639083 TRIB2Q92519 343 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 CAVIN3Q969G5 261 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 C18orf8Q96DM3 657 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 APOL6Q9BWW8 343 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 ACBD3Q9H3P7 528 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 CYP3A43Q9HB55 503 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 USTQ9Y2C2 406 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 TMEM191CA6NGB0 347 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 BHMG1C9JSJ3 638 aaPredicted RBP11.44□□□□□ -0.58
TARDBP-230ENST00000639083 PPEF2O14830 753 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 DAPK3O43293 454 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 MED7O43513 233 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 GNAT1P11488 350 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 FCGRTP55899 365 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 TAS2R40P59535 323 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 DR1Q01658 176 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 PTPN11Q06124 597 aaPredicted RBP11.44□□□□□ -0.58
TARDBP-230ENST00000639083 HLTFQ14527 1009 aaKnown RBP eCLIP11.44□□□□□ -0.58
TARDBP-230ENST00000639083 PPP2R5EQ16537 467 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.44□□□□□ -0.58
TARDBP-230ENST00000639083 MAGOHBQ96A72 148 aaKnown RBP11.44□□□□□ -0.58
TARDBP-230ENST00000639083 C18orf25Q96B23 403 aaPredicted RBP11.44□□□□□ -0.58
TARDBP-230ENST00000639083 DDX27Q96GQ7 796 aaKnown RBP11.44□□□□□ -0.58
TARDBP-230ENST00000639083 SNX27Q96L92 541 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 HEXIM2Q96MH2 286 aaKnown RBP11.44□□□□□ -0.58
TARDBP-230ENST00000639083 TRIM51Q9BSJ1 452 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 LHX5Q9H2C1 402 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 TUBGCP4Q9UGJ1 667 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 CYTH4Q9UIA0 394 aa11.44□□□□□ -0.58
TARDBP-230ENST00000639083 UTP11Q9Y3A2 253 aaKnown RBP11.44□□□□□ -0.58
TARDBP-230ENST00000639083 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.44□□□□□ -0.58
TARDBP-230ENST00000639083 TCRBV5S1A1TA0A578 114 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 DCAF8L1A6NGE4 600 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 RECQL4O94761 1208 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 RARAP10276 462 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 CYBAP13498 195 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 HSPA6P17066 643 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 ECHS1P30084 290 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 AXLP30530 894 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 HOXC8P31273 242 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 SSR1P43307 286 aaKnown RBP11.43□□□□□ -0.58
TARDBP-230ENST00000639083 NDST1P52848 882 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 CRYBB1P53674 252 aaPredicted RBP11.43□□□□□ -0.58
TARDBP-230ENST00000639083 FAM193AP78312 1265 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 TRIM32Q13049 653 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 ZBTB6Q15916 424 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 DNAJC24Q6P3W2 148 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 DCUN1D2Q6PH85 259 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 CXCL17Q6UXB2 119 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 ALKAL1Q6UXT8 129 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 DPH6Q7L8W6 267 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 RIN2Q8WYP3 895 aaPredicted RBP11.43□□□□□ -0.58
TARDBP-230ENST00000639083 MCEEQ96PE7 176 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 TRIM31Q9BZY9 425 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 RNF39Q9H2S5 420 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 KLK14Q9P0G3 267 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 TJP2Q9UDY2 1190 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 HTTP42858 3142 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 AGPSO00116 658 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 PHF2O75151 1096 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 SYF2O95926 243 aaKnown RBP11.43□□□□□ -0.58
TARDBP-230ENST00000639083 GGCXP38435 758 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 AARSP49588 968 aaKnown RBP eCLIP11.43□□□□□ -0.58
TARDBP-230ENST00000639083 GYS2P54840 703 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 MYO1EQ12965 1108 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 NNTQ13423 1086 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 CUL1Q13616 776 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 SIX1Q15475 284 aaPredicted RBP11.43□□□□□ -0.58
TARDBP-230ENST00000639083 PTPN20Q4JDL3 420 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 HSP90B2PQ58FF3 399 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 MFSD14CQ5VZR4 134 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 SMYD5Q6GMV2 418 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 TTC27Q6P3X3 843 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 RHOT1Q8IXI2 618 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 NME8Q8N427 588 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 PLVAPQ9BX97 442 aa11.43□□□□□ -0.58
TARDBP-230ENST00000639083 NEUROG2Q9H2A3 272 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms