RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ARHGAP29Q52LW3 1261 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 ADALQ6DHV7 355 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 THEM5Q8N1Q8 247 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 CELF5Q8N6W0 485 aaKnown RBP14.06□□□□□ -0.16
SF3B3-202ENST00000562722 OR10T2Q8NGX3 314 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 RAD54LQ92698 747 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 PSMG2Q969U7 264 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 ZFYVE19Q96K21 471 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 LPIN3Q9BQK8 851 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 PYM1Q9BRP8 204 aaKnown RBP14.06□□□□□ -0.16
SF3B3-202ENST00000562722 CPSF3Q9UKF6 684 aaKnown RBP14.06□□□□□ -0.16
SF3B3-202ENST00000562722 DSEQ9UL01 958 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 GPR179Q6PRD1 2367 aa14.06□□□□□ -0.16
SF3B3-202ENST00000562722 CHURC1-FNTBB4DL54 471 aa14.05□□□□□ -0.16
SF3B3-202ENST00000562722 SPECC1L-ADORA2AF8WAN1 911 aa14.05□□□□□ -0.16
SF3B3-202ENST00000562722 CYB561D2O14569 222 aa14.05□□□□□ -0.16
SF3B3-202ENST00000562722 BMP15O95972 392 aa14.05□□□□□ -0.16
SF3B3-202ENST00000562722 TDGF1P13385 188 aa14.05□□□□□ -0.16
SF3B3-202ENST00000562722 NMT1P30419 496 aaKnown RBP14.05□□□□□ -0.16
SF3B3-202ENST00000562722 LONP1P36776 959 aaKnown RBP14.05□□□□□ -0.16
SF3B3-202ENST00000562722 FNTBP49356 437 aa14.05□□□□□ -0.16
SF3B3-202ENST00000562722 ZNF131P52739 623 aa14.05□□□□□ -0.16
SF3B3-202ENST00000562722 MLLT6P55198 1093 aaPredicted RBP14.05□□□□□ -0.16
SF3B3-202ENST00000562722 CYP4F8P98187 520 aa14.05□□□□□ -0.16
SF3B3-202ENST00000562722 SPEM2Q0P670 501 aa14.05□□□□□ -0.16
SF3B3-202ENST00000562722 SIM2Q14190 667 aaPredicted RBP14.05□□□□□ -0.16
SF3B3-202ENST00000562722 ZC2HC1CQ53FD0 456 aaPredicted RBP14.05□□□□□ -0.16
SF3B3-202ENST00000562722 HEATR6Q6AI08 1181 aaKnown RBP14.05□□□□□ -0.16
SF3B3-202ENST00000562722 LAIR1Q6GTX8 287 aa14.05□□□□□ -0.16
SF3B3-202ENST00000562722 SLC39A4Q6P5W5 647 aa14.05□□□□□ -0.16
SF3B3-202ENST00000562722 MAMSTRQ6ZN01 415 aa14.05□□□□□ -0.16
SF3B3-202ENST00000562722 GAREM2Q75VX8 874 aa14.05□□□□□ -0.16
SF3B3-202ENST00000562722 RALGPS2Q86X27 583 aaPredicted RBP14.05□□□□□ -0.16
SF3B3-202ENST00000562722 SPEM1Q8N4L4 309 aa14.05□□□□□ -0.16
SF3B3-202ENST00000562722 KRI1Q8N9T8 703 aaKnown RBP14.05□□□□□ -0.16
SF3B3-202ENST00000562722 BLOC1S4Q9NUP1 217 aa14.05□□□□□ -0.16
SF3B3-202ENST00000562722 THG1LQ9NWX6 298 aaKnown RBP14.05□□□□□ -0.16
SF3B3-202ENST00000562722 GTSE1Q9NYZ3 720 aa14.05□□□□□ -0.16
SF3B3-202ENST00000562722 DERAQ9Y315 318 aa14.05□□□□□ -0.16
SF3B3-202ENST00000562722 CACNA1AO00555 2505 aa14.05□□□□□ -0.16
SF3B3-202ENST00000562722 COL4A2P08572 1712 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 TISP43B9A030 160 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 ANKRD63C9JTQ0 380 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 PIRO00625 290 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 ADRB2P07550 413 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 CDC25CP30307 473 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 CTHP32929 405 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 TAF6P49848 677 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 ATXN1P54253 815 aaKnown RBP14.04□□□□□ -0.16
SF3B3-202ENST00000562722 GAS6Q14393 721 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 PON2Q15165 354 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 DGKKQ5KSL6 1271 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 LARP1BQ659C4 914 aaKnown RBP14.04□□□□□ -0.16
SF3B3-202ENST00000562722 SLFN12LQ6IEE8 588 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 Q6ZS52 159 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.04□□□□□ -0.16
SF3B3-202ENST00000562722 BPIFB1Q8TDL5 484 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 GIPC2Q8TF65 315 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 LRRC15Q8TF66 581 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 LARP4BQ92615 738 aaKnown RBP14.04□□□□□ -0.16
SF3B3-202ENST00000562722 KCNN1Q92952 543 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 ZCWPW1Q9H0M4 648 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 SMG9Q9H0W8 520 aaKnown RBP14.04□□□□□ -0.16
SF3B3-202ENST00000562722 TASP1Q9H6P5 420 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 UPF2Q9HAU5 1272 aaKnown RBP14.04□□□□□ -0.16
SF3B3-202ENST00000562722 PARD6AQ9NPB6 346 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 DPP3Q9NY33 737 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 ABI2Q9NYB9 513 aaPredicted RBP14.04□□□□□ -0.16
SF3B3-202ENST00000562722 HSFX1Q9UBD0 423 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 AGO2Q9UKV8 859 aaKnown RBP14.04□□□□□ -0.16
SF3B3-202ENST00000562722 DMXL1Q9Y485 3027 aa14.04□□□□□ -0.16
SF3B3-202ENST00000562722 MYBPHLA2RUH7 354 aa14.03□□□□□ -0.16
SF3B3-202ENST00000562722 DCDC2BA2VCK2 349 aa14.03□□□□□ -0.16
SF3B3-202ENST00000562722 PRAMEF12O95522 483 aa14.03□□□□□ -0.16
SF3B3-202ENST00000562722 RETP07949 1114 aa14.03□□□□□ -0.16
SF3B3-202ENST00000562722 GTF2BQ00403 316 aa14.03□□□□□ -0.16
SF3B3-202ENST00000562722 PLCB2Q00722 1185 aa14.03□□□□□ -0.16
SF3B3-202ENST00000562722 GRIN1Q05586 938 aa14.03□□□□□ -0.16
SF3B3-202ENST00000562722 TNK2Q07912 1038 aa14.03□□□□□ -0.16
SF3B3-202ENST00000562722 DMWDQ09019 674 aa14.03□□□□□ -0.16
SF3B3-202ENST00000562722 SRSF5Q13243 272 aaKnown RBP14.03□□□□□ -0.16
SF3B3-202ENST00000562722 TXNDC11Q6PKC3 985 aa14.03□□□□□ -0.16
SF3B3-202ENST00000562722 CEP68Q76N32 757 aa14.03□□□□□ -0.16
SF3B3-202ENST00000562722 POMGNT1Q8WZA1 660 aa14.03□□□□□ -0.16
SF3B3-202ENST00000562722 LRRC3BQ96PB8 259 aa14.03□□□□□ -0.16
SF3B3-202ENST00000562722 MKNK1Q9BUB5 465 aa14.03□□□□□ -0.16
SF3B3-202ENST00000562722 ASB7Q9H672 318 aa14.03□□□□□ -0.16
SF3B3-202ENST00000562722 OBP2AQ9NY56 170 aa14.03□□□□□ -0.16
SF3B3-202ENST00000562722 C2CD2Q9Y426 696 aa14.03□□□□□ -0.16
SF3B3-202ENST00000562722 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.03□□□□□ -0.16
SF3B3-202ENST00000562722 WDR87Q6ZQQ6 2873 aa14.03□□□□□ -0.16
SF3B3-202ENST00000562722 F5P12259 2224 aa14.02□□□□□ -0.16
SF3B3-202ENST00000562722 ANO9A1A5B4 782 aa14.02□□□□□ -0.17
SF3B3-202ENST00000562722 CD2BP2O95400 341 aaKnown RBP14.02□□□□□ -0.17
SF3B3-202ENST00000562722 CYP11A1P05108 521 aa14.02□□□□□ -0.17
SF3B3-202ENST00000562722 ATF6P18850 670 aa14.02□□□□□ -0.17
SF3B3-202ENST00000562722 MCM2P49736 904 aa14.02□□□□□ -0.17
SF3B3-202ENST00000562722 SMARCB1Q12824 385 aa14.02□□□□□ -0.17
SF3B3-202ENST00000562722 SF3A1Q15459 793 aaKnown RBP14.02□□□□□ -0.17
SF3B3-202ENST00000562722 SV2CQ496J9 727 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms