RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 AGAP1Q9UPQ3 857 aa5.97□□□□□ -1.45
USP8-218ENST00000561330 A0A1W2PPL8 197 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 GRID2IPA4D2P6 1211 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 FAM227AF5H4B4 570 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 M0QYG6 137 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 FOXN1O15353 648 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 RAMP2O60895 175 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 KIF20AO95235 890 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 ATF3P18847 181 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 FDXRP22570 491 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 TGFB2P61812 414 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 MC2RQ01718 297 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 CD300EQ496F6 205 aaPredicted RBP5.96□□□□□ -1.46
USP8-218ENST00000561330 SLC30A10Q6XR72 485 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 Q6YL49 198 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 C14orf80Q86SX3 495 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 LDLRAD3Q86YD5 345 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 CELF5Q8N6W0 485 aaKnown RBP5.96□□□□□ -1.46
USP8-218ENST00000561330 PCSK9Q8NBP7 692 aaKnown RBP5.96□□□□□ -1.46
USP8-218ENST00000561330 SNX19Q92543 992 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 COQ10AQ96MF6 247 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 MRIQ9BWK5 157 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 B3GNT5Q9BYG0 378 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 CASS4Q9NQ75 786 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 INTS13Q9NVM9 706 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 PIH1D1Q9NWS0 290 aaKnown RBP5.96□□□□□ -1.46
USP8-218ENST00000561330 ETAA1Q9NY74 926 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 DMTF1Q9Y222 760 aa5.96□□□□□ -1.46
USP8-218ENST00000561330 CAPN8A6NHC0 703 aa5.95□□□□□ -1.46
USP8-218ENST00000561330 MARCH6O60337 910 aa5.95□□□□□ -1.46
USP8-218ENST00000561330 VPS4BO75351 444 aa5.95□□□□□ -1.46
USP8-218ENST00000561330 GCP02774 474 aa5.95□□□□□ -1.46
USP8-218ENST00000561330 TGM1P22735 817 aa5.95□□□□□ -1.46
USP8-218ENST00000561330 FSTL1Q12841 308 aa5.95□□□□□ -1.46
USP8-218ENST00000561330 TCF15Q12870 199 aa5.95□□□□□ -1.46
USP8-218ENST00000561330 HECTD2Q5U5R9 776 aa5.95□□□□□ -1.46
USP8-218ENST00000561330 FAM160B1Q5W0V3 765 aa5.95□□□□□ -1.46
USP8-218ENST00000561330 MICALCLQ6ZW33 695 aa5.95□□□□□ -1.46
USP8-218ENST00000561330 PPP1R32Q7Z5V6 425 aa5.95□□□□□ -1.46
USP8-218ENST00000561330 KIAA0319LQ8IZA0 1049 aa5.95□□□□□ -1.46
USP8-218ENST00000561330 ADGRG5Q8IZF4 528 aa5.95□□□□□ -1.46
USP8-218ENST00000561330 PSD4Q8NDX1 1056 aa5.95□□□□□ -1.46
USP8-218ENST00000561330 POC1BQ8TC44 478 aa5.95□□□□□ -1.46
USP8-218ENST00000561330 CAVIN3Q969G5 261 aa5.95□□□□□ -1.46
USP8-218ENST00000561330 MRGPRX1Q96LB2 322 aa5.95□□□□□ -1.46
USP8-218ENST00000561330 Q96MF0 132 aa5.95□□□□□ -1.46
USP8-218ENST00000561330 NT5C1BQ96P26 610 aa5.95□□□□□ -1.46
USP8-218ENST00000561330 SYBUQ9NX95 663 aa5.95□□□□□ -1.46
USP8-218ENST00000561330 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.95□□□□□ -1.46
USP8-218ENST00000561330 PHGDHO43175 533 aaKnown RBP5.94□□□□□ -1.46
USP8-218ENST00000561330 SOAT2O75908 522 aa5.94□□□□□ -1.46
USP8-218ENST00000561330 RHOBTB3O94955 611 aa5.94□□□□□ -1.46
USP8-218ENST00000561330 PARNO95453 639 aaKnown RBP5.94□□□□□ -1.46
USP8-218ENST00000561330 PIM1P11309 404 aaPredicted RBP5.94□□□□□ -1.46
USP8-218ENST00000561330 HMGA2P52926 109 aa5.94□□□□□ -1.46
USP8-218ENST00000561330 HLXQ14774 488 aaPredicted RBP5.94□□□□□ -1.46
USP8-218ENST00000561330 LLGL1Q15334 1064 aa5.94□□□□□ -1.46
USP8-218ENST00000561330 AMOTQ4VCS5 1084 aa5.94□□□□□ -1.46
USP8-218ENST00000561330 TAF2Q6P1X5 1199 aa5.94□□□□□ -1.46
USP8-218ENST00000561330 BEND2Q8NDZ0 799 aa5.94□□□□□ -1.46
USP8-218ENST00000561330 FAM46DQ8NEK8 389 aa5.94□□□□□ -1.46
USP8-218ENST00000561330 LINC00476Q8WZB0 136 aa5.94□□□□□ -1.46
USP8-218ENST00000561330 AIFM2Q9BRQ8 373 aa5.94□□□□□ -1.46
USP8-218ENST00000561330 ZMAT3Q9HA38 289 aaKnown RBP5.94□□□□□ -1.46
USP8-218ENST00000561330 MRPS18AQ9NVS2 196 aaKnown RBP5.94□□□□□ -1.46
USP8-218ENST00000561330 OBP2AQ9NY56 170 aa5.94□□□□□ -1.46
USP8-218ENST00000561330 CHPF2Q9P2E5 772 aa5.94□□□□□ -1.46
USP8-218ENST00000561330 DDX20Q9UHI6 824 aaKnown RBP5.94□□□□□ -1.46
USP8-218ENST00000561330 PLEKHM1Q9Y4G2 1056 aa5.94□□□□□ -1.46
USP8-218ENST00000561330 RAD54BQ9Y620 910 aa5.94□□□□□ -1.46
USP8-218ENST00000561330 COL4A3Q01955 1670 aa5.94□□□□□ -1.46
USP8-218ENST00000561330 WDR33Q9C0J8 1336 aaKnown RBP5.94□□□□□ -1.46
USP8-218ENST00000561330 A0A087X1B8 175 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 DNAJB5O75953 348 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 UNC5CO95185 931 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 CHRM3P20309 590 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 GATA3P23771 443 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 NPTX2P47972 431 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 MPP3Q13368 585 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 GBX1Q14549 363 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 GRM3Q14832 879 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 MAEAQ7L5Y9 396 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 TMPRSS9Q7Z410 1059 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 SRGAP1Q7Z6B7 1085 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 LNX2Q8N448 690 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 SLC44A3Q8N4M1 653 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 SSH3Q8TE77 659 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 CHFRQ96EP1 664 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 SMOC2Q9H3U7 446 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 TOR3AQ9H497 397 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 PRDM11Q9NQV5 511 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 KCTD5Q9NXV2 234 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 PACSIN3Q9UKS6 424 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 L1RE1Q9UN81 338 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 MED16Q9Y2X0 877 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 EPN1Q9Y6I3 576 aaPredicted RBP5.93□□□□□ -1.46
USP8-218ENST00000561330 MAST3O60307 1309 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 SPATA31A3Q5VYP0 1347 aa5.93□□□□□ -1.46
USP8-218ENST00000561330 FRMPD2Q68DX3 1309 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 224.4 ms