RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 MATN4O95460 622 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 ABHD16AO95870 558 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 HMGCRP04035 888 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 ZNF888P0CJ79 500 aaPredicted RBP5.34□□□□□ -1.55
VPS13A-211ENST00000484581 KCNQ1P51787 676 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 ARL4CP56559 192 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 SLC13A2Q13183 592 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 DDX10Q13206 875 aaKnown RBP5.34□□□□□ -1.55
VPS13A-211ENST00000484581 HABP2Q14520 560 aaPredicted RBP5.34□□□□□ -1.55
VPS13A-211ENST00000484581 SLC44A4Q53GD3 710 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 USP39Q53GS9 565 aaKnown RBP5.34□□□□□ -1.55
VPS13A-211ENST00000484581 CRB2Q5IJ48 1285 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 RNF207Q6ZRF8 634 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 ZNF572Q7Z3I7 529 aaPredicted RBP5.34□□□□□ -1.55
VPS13A-211ENST00000484581 DCBLD1Q8N8Z6 715 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 EDAQ92838 391 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 LPPQ93052 612 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 MUL1Q969V5 352 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 SKA1Q96BD8 255 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 PAGR1Q9BTK6 254 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 DACT1Q9NYF0 836 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 MOCS1Q9NZB8 636 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 LRFN1Q9P244 771 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 ING1Q9UK53 422 aaPredicted RBP5.34□□□□□ -1.55
VPS13A-211ENST00000484581 CDC42EP3Q9UKI2 254 aa5.34□□□□□ -1.55
VPS13A-211ENST00000484581 TTBK1Q5TCY1 1321 aaPredicted RBP5.33□□□□□ -1.56
VPS13A-211ENST00000484581 MBD3L4A6NDZ8 208 aaPredicted RBP5.33□□□□□ -1.56
VPS13A-211ENST00000484581 MBD3L3A6NE82 208 aaPredicted RBP5.33□□□□□ -1.56
VPS13A-211ENST00000484581 LGALS16A8MUM7 142 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 IRAK2O43187 625 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 EPB41L2O43491 1005 aaKnown RBP5.33□□□□□ -1.56
VPS13A-211ENST00000484581 MT-ND5P03915 603 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 GNAI3P08754 354 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 MYL4P12829 197 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 HDCP19113 662 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 CR2P20023 1033 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 FPR1P21462 350 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 SERPINF1P36955 418 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 KCNJ5P48544 419 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 GNAI1P63096 354 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 EXOSC9Q06265 439 aaKnown RBP5.33□□□□□ -1.56
VPS13A-211ENST00000484581 GRM1Q13255 1194 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 RAB32Q13637 225 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 FHL2Q14192 279 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 POSTNQ15063 836 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 INTS11Q5TA45 600 aaKnown RBP5.33□□□□□ -1.56
VPS13A-211ENST00000484581 AGBL4Q5VU57 503 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 TRIM68Q6AZZ1 485 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 MICU3Q86XE3 530 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 RTKN2Q8IZC4 609 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 ATG16L2Q8NAA4 619 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 PLA2G15Q8NCC3 412 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 TNPO1Q92973 898 aaKnown RBP5.33□□□□□ -1.56
VPS13A-211ENST00000484581 USP13Q92995 863 aaPredicted RBP5.33□□□□□ -1.56
VPS13A-211ENST00000484581 UBXN10Q96LJ8 280 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 ZNF518BQ9C0D4 1074 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 C11orf54Q9H0W9 315 aaPredicted RBP5.33□□□□□ -1.56
VPS13A-211ENST00000484581 OBP2BQ9NPH6 170 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 RLIMQ9NVW2 624 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 ACTL7AQ9Y615 435 aa5.33□□□□□ -1.56
VPS13A-211ENST00000484581 J3KRW8 73 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 BTN3A1O00481 513 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 NRP1O14786 923 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 ARHGAP6O43182 974 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 RAD17O75943 681 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 ACO1P21399 889 aaKnown RBP5.32□□□□□ -1.56
VPS13A-211ENST00000484581 KLRC1P26715 233 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 PTPN7P35236 360 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 KIR2DL3P43628 341 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 CARSP49589 748 aaKnown RBP5.32□□□□□ -1.56
VPS13A-211ENST00000484581 DUSP2Q05923 314 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 ABHD18Q0P651 414 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 KIF22Q14807 665 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 PABPC1LQ4VXU2 614 aaKnown RBP5.32□□□□□ -1.56
VPS13A-211ENST00000484581 CCDC93Q567U6 631 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 ZMAT1Q5H9K5 638 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 MIIPQ5JXC2 388 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 PRAMEF14Q5SWL7 426 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 HYIQ5T013 277 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 GGT6Q6P531 493 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 FUKQ8N0W3 1084 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 REPS2Q8NFH8 660 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 EXTL1Q92935 676 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 SLC7A6OSQ96CW6 309 aaPredicted RBP5.32□□□□□ -1.56
VPS13A-211ENST00000484581 C18orf8Q96DM3 657 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 FAM89AQ96GI7 184 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 GDF15Q99988 308 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 EIF2AK1Q9BQI3 630 aaKnown RBP5.32□□□□□ -1.56
VPS13A-211ENST00000484581 HEPHQ9BQS7 1158 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 TMX4Q9H1E5 349 aaPredicted RBP5.32□□□□□ -1.56
VPS13A-211ENST00000484581 C12orf65Q9H3J6 166 aaKnown RBP5.32□□□□□ -1.56
VPS13A-211ENST00000484581 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.32□□□□□ -1.56
VPS13A-211ENST00000484581 GJB4Q9NTQ9 266 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 ING3Q9NXR8 418 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 MAN2B2Q9Y2E5 1009 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 NR2E1Q9Y466 385 aa5.32□□□□□ -1.56
VPS13A-211ENST00000484581 CTDP1Q9Y5B0 961 aaPredicted RBP5.32□□□□□ -1.56
VPS13A-211ENST00000484581 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.32□□□□□ -1.56
VPS13A-211ENST00000484581 ATRNL1Q5VV63 1379 aa5.31□□□□□ -1.56
VPS13A-211ENST00000484581 PODXLO00592 558 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms