RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 PDE11AQ9HCR9 933 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 DSEQ9UL01 958 aa9.74□□□□□ -0.85
USF1-204ENST00000472217 COL4A2P08572 1712 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 EIF3DO15371 548 aaKnown RBP eCLIP9.73□□□□□ -0.85
USF1-204ENST00000472217 DCNP07585 359 aaKnown RBP9.73□□□□□ -0.85
USF1-204ENST00000472217 POLR2BP30876 1174 aaKnown RBP9.73□□□□□ -0.85
USF1-204ENST00000472217 ALDH1A3P47895 512 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 EPHB3P54753 998 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 PFKPQ01813 784 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 EHHADHQ08426 723 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 TEAD2Q15562 447 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 MLF2Q15773 248 aaPredicted RBP9.73□□□□□ -0.85
USF1-204ENST00000472217 SLC44A4Q53GD3 710 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 FAM26FQ5R3K3 315 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 RESP18Q5W5W9 173 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 LMBRD2Q68DH5 695 aaPredicted RBP9.73□□□□□ -0.85
USF1-204ENST00000472217 SCARA3Q6AZY7 606 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 EPM2AIP1Q7L775 607 aaPredicted RBP9.73□□□□□ -0.85
USF1-204ENST00000472217 THEM5Q8N1Q8 247 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 PJA1Q8NG27 643 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 CXorf38Q8TB03 319 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 SHKBP1Q8TBC3 707 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 SMARCD2Q92925 531 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 SHDQ96IW2 340 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 ASB16Q96NS5 453 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 C7orf25Q9BPX7 421 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 MTMR12Q9C0I1 747 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 BLZF1Q9H2G9 400 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 MAGEF1Q9HAY2 307 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 ZFP14Q9HCL3 533 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 ZNF334Q9HCZ1 680 aaPredicted RBP9.73□□□□□ -0.85
USF1-204ENST00000472217 HSPBP1Q9NZL4 362 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 DLGAP2Q9P1A6 1054 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 HSFX1Q9UBD0 423 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 ITGA11Q9UKX5 1188 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 AGAP1Q9UPQ3 857 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 SIT1Q9Y3P8 196 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 PTPRJQ12913 1337 aa9.73□□□□□ -0.85
USF1-204ENST00000472217 WDFY4Q6ZS81 3184 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.72□□□□□ -0.85
USF1-204ENST00000472217 A0A1W2PRU2 124 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 KANSL1LA0AUZ9 987 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 KIAA0391O15091 583 aaKnown RBP9.72□□□□□ -0.85
USF1-204ENST00000472217 TGFB1I1O43294 461 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 LRRN2O75325 713 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 KRT19P08727 400 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 TMEM191BP0C7N4 346 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 GLULP15104 373 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 ATF6P18850 670 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 CD72P21854 359 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 PNPLA4P41247 253 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 NBL1P41271 181 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 PRKCQQ04759 706 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 BFSP1Q12934 665 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 GRM2Q14416 872 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 ANGPT1Q15389 498 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 VITQ6UXI7 678 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 UNC13DQ70J99 1090 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 LRRTM3Q86VH5 581 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 CBWD2Q8IUF1 395 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 NELFCDQ8IXH7 590 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 PDCL2Q8N4E4 241 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 CSGALNACT2Q8N6G5 542 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 LRRC52Q8N7C0 313 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 ZSCAN18Q8TBC5 510 aaPredicted RBP9.72□□□□□ -0.85
USF1-204ENST00000472217 ZNF507Q8TCN5 953 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 SPPL2BQ8TCT7 592 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 CACTINQ8WUQ7 758 aaKnown RBP9.72□□□□□ -0.85
USF1-204ENST00000472217 PSMG2Q969U7 264 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 SEPT5Q99719 369 aaPredicted RBP9.72□□□□□ -0.85
USF1-204ENST00000472217 LPIN3Q9BQK8 851 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 DDX23Q9BUQ8 820 aaKnown RBP9.72□□□□□ -0.85
USF1-204ENST00000472217 SLITRK6Q9H5Y7 841 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 TRPV4Q9HBA0 871 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 INTS13Q9NVM9 706 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 ABI2Q9NYB9 513 aaPredicted RBP9.72□□□□□ -0.85
USF1-204ENST00000472217 FAM13BQ9NYF5 915 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 SIX4Q9UIU6 781 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 RCOR1Q9UKL0 485 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 CFAP45Q9UL16 551 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 L1RE1Q9UN81 338 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 ASB3Q9Y575 518 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 NCANO14594 1321 aa9.72□□□□□ -0.85
USF1-204ENST00000472217 ZNF233A6NK53 670 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 PROB1E7EW31 1015 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 ACTN4O43707 911 aaKnown RBP9.71□□□□□ -0.86
USF1-204ENST00000472217 GFRA3O60609 400 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 HUS1O60921 280 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 PSMC3P17980 439 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 VIPR2P41587 438 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 AFMP43652 599 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 TUFMP49411 452 aaKnown RBP9.71□□□□□ -0.86
USF1-204ENST00000472217 CUL4BQ13620 913 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 MGAT5BQ3V5L5 792 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 STXBP5Q5T5C0 1151 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 TPRG1Q6ZUI0 275 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 GAREM2Q75VX8 874 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 FRMD5Q7Z6J6 570 aa9.71□□□□□ -0.86
USF1-204ENST00000472217 DNAJB7Q7Z6W7 309 aaPredicted RBP9.71□□□□□ -0.86
USF1-204ENST00000472217 ITIH5Q86UX2 942 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms