RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 EFTUD2Q15029 972 aaKnown RBP eCLIP13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 RASA2Q15283 850 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 DRICH1Q6PGQ1 229 aaPredicted RBP13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 MFSD7Q6UXD7 560 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 C4orf50Q6ZRC1 276 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 NIPA1Q7RTP0 329 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 DNAJC9Q8WXX5 260 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 SYT15Q9BQS2 421 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 CADM1Q9BY67 442 aaKnown RBP13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 C12orf65Q9H3J6 166 aaKnown RBP13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 KMT5AQ9NQR1 393 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 SAR1AQ9NR31 198 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 PSMC3IPQ9P2W1 217 aaPredicted RBP13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 SLC24A2Q9UI40 661 aa13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 RPL26L1Q9UNX3 145 aaKnown RBP13.71□□□□□ -0.21
PDZRN3-205ENST00000466780 CLUHO75153 1309 aa13.71□□□□□ -0.22
PDZRN3-205ENST00000466780 SPDYE5A6NIY4 337 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 PIAS1O75925 651 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 APBA3O96018 575 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 CCNE2O96020 404 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 ACADSP16219 412 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 ATF7P17544 494 aaPredicted RBP13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 GAD2Q05329 585 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 PDIA2Q13087 525 aaKnown RBP13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 DMP1Q13316 513 aaPredicted RBP13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 WDR72Q3MJ13 1102 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 EFHC2Q5JST6 749 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 DSTYKQ6XUX3 929 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 ANKMY2Q8IV38 441 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 LMNTD2Q8IXW0 634 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 GPD1LQ8N335 351 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 DCTN4Q9UJW0 460 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 WDR91A4D1P6 747 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 H0YIN7 160 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 PLSCR1O15162 318 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 ATP9AO75110 1047 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 PSMC5P62195 406 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 RPL7AP62424 266 aaKnown RBP13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 OVGP1Q12889 678 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 MTMR1Q13613 665 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 OASLQ15646 514 aaKnown RBP13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 ANO5Q75V66 913 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 PHF13Q86YI8 300 aaPredicted RBP13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 SPDYE1Q8NFV5 336 aaPredicted RBP13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 FBXO41Q8TF61 875 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 CLEC4DQ8WXI8 215 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 GLIS2Q9BZE0 524 aaPredicted RBP13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 DCLRE1BQ9H816 532 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 MRPL47Q9HD33 250 aaKnown RBP13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 SPATS2LQ9NUQ6 558 aaKnown RBP13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 SIGLEC16A6NMB1 481 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 HLA-DRAP01903 254 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 CHRNA5P30532 468 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 BPIFB4P59827 614 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 MRPS35P82673 323 aaKnown RBP13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 ZNF252P-AS1Q0IIN9 211 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 USP37Q86T82 979 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 RCOR2Q8IZ40 523 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 ABRAQ8N0Z2 381 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 ZNF398Q8TD17 642 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 HAUS1Q96CS2 278 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 ZNF333Q96JL9 665 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 ARL8BQ9NVJ2 186 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 NMRK1Q9NWW6 199 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 HERC5Q9UII4 1024 aaKnown RBP13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 RABGEF1Q9UJ41 708 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 CCPG1Q9ULG6 757 aa13.7□□□□□ -0.22
PDZRN3-205ENST00000466780 TCP10L2B9ZVM9 353 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 GOLGA8SH3BPF8 625 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 GOLGA8MH3BSY2 632 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 PLA2G6O60733 806 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 ZWINTO95229 277 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 KRT1P04264 644 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 THEMIS2Q5TEJ8 643 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 TXNRD3NBQ6F5E7 133 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 CENPUQ71F23 418 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 APBB1IPQ7Z5R6 666 aaPredicted RBP13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 FAM160B2Q86V87 743 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 RBBP8NLQ8NC74 664 aaPredicted RBP13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 FEZF2Q8TBJ5 459 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 MZB1Q8WU39 189 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 FAM136AQ96C01 138 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 ACSF2Q96CM8 615 aaPredicted RBP13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 PTCD3Q96EY7 689 aaKnown RBP13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 APOBEC3GQ9HC16 384 aaKnown RBP13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 SSU72Q9NP77 194 aaKnown RBP13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 ANKFY1Q9P2R3 1169 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 IVNS1ABPQ9Y6Y0 642 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 PTPRJQ12913 1337 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 ABLIM1O14639 778 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 HNRNPDLO14979 420 aaKnown RBP13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 ZBED4O75132 1171 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 TJP3O95049 919 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 GLRA2P23416 452 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 RXRBP28702 533 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 SSTR1P30872 391 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 VCPP55072 806 aaKnown RBP13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 GEMIN4P57678 1058 aaKnown RBP13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 TFDP1Q14186 410 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 ZACNQ401N2 412 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms