RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 C15orf39Q6ZRI6 1047 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 C11orf57Q6ZUT1 292 aaPredicted RBP6.83□□□□□ -1.32
SF3B1-206ENST00000462613 TAS1R1Q7RTX1 841 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 ELMOD1Q8N336 334 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 EFHBQ8N7U6 833 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 ZNF461Q8TAF7 563 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 LNX1Q8TBB1 728 aaPredicted RBP6.83□□□□□ -1.32
SF3B1-206ENST00000462613 TAS1R2Q8TE23 839 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 C2orf15Q8WU43 125 aaKnown RBP6.83□□□□□ -1.32
SF3B1-206ENST00000462613 HDAC7Q8WUI4 952 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 AUTS2Q8WXX7 1259 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 ZNF516Q92618 1163 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 HLA-CQ95604 372 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 PABPC5Q96DU9 382 aaKnown RBP6.83□□□□□ -1.32
SF3B1-206ENST00000462613 BORCS6Q96GS4 357 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 B3GALT6Q96L58 329 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 KLHL5Q96PQ7 755 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 VN1R3Q9BXE9 311 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 NIF3L1Q9GZT8 377 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 GZF1Q9H116 711 aaPredicted RBP6.83□□□□□ -1.32
SF3B1-206ENST00000462613 NDST4Q9H3R1 872 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 SFXN1Q9H9B4 322 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 CYP3A43Q9HB55 503 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 RXFP1Q9HBX9 757 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 DDX43Q9NXZ2 648 aaKnown RBP6.83□□□□□ -1.32
SF3B1-206ENST00000462613 GCNT4Q9P109 453 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 FBXL5Q9UKA1 691 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 TIMM13Q9Y5L4 95 aaPredicted RBP6.83□□□□□ -1.32
SF3B1-206ENST00000462613 HCFC2Q9Y5Z7 792 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 DENND4CQ5VZ89 1909 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 MYO16Q9Y6X6 1858 aa6.83□□□□□ -1.32
SF3B1-206ENST00000462613 GREB1Q4ZG55 1949 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 CHD9Q3L8U1 2897 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 A8MXQ7 604 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 PER2O15055 1255 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 SPTLC1O15269 473 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 CLASP2O75122 1294 aaKnown RBP6.82□□□□□ -1.32
SF3B1-206ENST00000462613 XYLBO75191 536 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 TACC1O75410 805 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 EFEMP2O95967 443 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 SERPINC1P01008 464 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 LRG1P02750 347 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 ATF2P15336 505 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 RPL17P18621 184 aaKnown RBP6.82□□□□□ -1.32
SF3B1-206ENST00000462613 WARSP23381 471 aaKnown RBP6.82□□□□□ -1.32
SF3B1-206ENST00000462613 ALDH1A3P47895 512 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 MCCD1P59942 119 aaPredicted RBP6.82□□□□□ -1.32
SF3B1-206ENST00000462613 ROR1Q01973 937 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 HYAL1Q12794 435 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 RAB33AQ14088 237 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 MRPL58Q14197 206 aaKnown RBP6.82□□□□□ -1.32
SF3B1-206ENST00000462613 VEPH1Q14D04 833 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 TAF12Q16514 161 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 UVSSAQ2YD98 709 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 PUS10Q3MIT2 529 aaKnown RBP6.82□□□□□ -1.32
SF3B1-206ENST00000462613 CBWD6Q4V339 395 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 CBWD3Q5JTY5 395 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 CBWD5Q5RIA9 395 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 PPM1LQ5SGD2 360 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 SLC8B1Q6J4K2 584 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 LLGL2Q6P1M3 1020 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 LRSAM1Q6UWE0 723 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 CD300LGQ6UXG3 332 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 SCARA5Q6ZMJ2 495 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 ENOSF1Q7L5Y1 443 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 ADGRD2Q7Z7M1 963 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 UNC93AQ86WB7 457 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 PALB2Q86YC2 1186 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 SPATA2LQ8IUW3 424 aaPredicted RBP6.82□□□□□ -1.32
SF3B1-206ENST00000462613 PPM1KQ8N3J5 372 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 PDCL2Q8N4E4 241 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 KREMEN2Q8NCW0 462 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 FAM200AQ8TCP9 573 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 SPPL2BQ8TCT7 592 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 PLEKHO2Q8TD55 490 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 PCMTD1Q96MG8 357 aaPredicted RBP6.82□□□□□ -1.32
SF3B1-206ENST00000462613 SYT15Q9BQS2 421 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 CLSTN3Q9BQT9 956 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 ACBD6Q9BR61 282 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 PI4K2AQ9BTU6 479 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 PIDD1Q9HB75 910 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 MAN1C1Q9NR34 630 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 SAMSN1Q9NSI8 373 aaKnown RBP6.82□□□□□ -1.32
SF3B1-206ENST00000462613 FANCLQ9NW38 375 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 THEGQ9P2T0 379 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 CDH9Q9ULB4 789 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 L1RE1Q9UN81 338 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 COQ4Q9Y3A0 265 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 PCDHB5Q9Y5E4 795 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 CHD7Q9P2D1 2997 aa6.82□□□□□ -1.32
SF3B1-206ENST00000462613 DOCK6Q96HP0 2047 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 TCF20Q9UGU0 1960 aaKnown RBP6.81□□□□□ -1.32
SF3B1-206ENST00000462613 TGM5O43548 720 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 LILRB3O75022 631 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 VNN1O95497 513 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 C8AP07357 584 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 KCNA5P22460 613 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 RFX1P22670 979 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 ANXA13P27216 316 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 HOXA9P31269 272 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms