RNA–Protein interactions for RNA: ENST00000452375.5

COPS7B-216, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-216ENST00000452375 CNTN2Q02246 1040 aa7.74□□□□□ -1.17
COPS7B-216ENST00000452375 MTX1Q13505 466 aa7.74□□□□□ -1.17
COPS7B-216ENST00000452375 MRM1Q6IN84 353 aaKnown RBP7.74□□□□□ -1.17
COPS7B-216ENST00000452375 EDAQ92838 391 aa7.74□□□□□ -1.17
COPS7B-216ENST00000452375 CCDC140Q96MF4 163 aa7.74□□□□□ -1.17
COPS7B-216ENST00000452375 TGS1Q96RS0 853 aaKnown RBP7.74□□□□□ -1.17
COPS7B-216ENST00000452375 NUP88Q99567 741 aaPredicted RBP7.74□□□□□ -1.17
COPS7B-216ENST00000452375 TEX13BQ9BXU2 312 aa7.74□□□□□ -1.17
COPS7B-216ENST00000452375 FTOQ9C0B1 505 aaKnown RBP eCLIP7.74□□□□□ -1.17
COPS7B-216ENST00000452375 PDGFCQ9NRA1 345 aa7.74□□□□□ -1.17
COPS7B-216ENST00000452375 EPG5Q9HCE0 2579 aa7.74□□□□□ -1.17
COPS7B-216ENST00000452375 MYH8P13535 1937 aa7.74□□□□□ -1.17
COPS7B-216ENST00000452375 GVINP1Q7Z2Y8 2422 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 COL4A6Q14031 1691 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 TMEM221A6NGB7 291 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 M0R296 226 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 FOXS1O43638 330 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 MAFKO60675 156 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 BAIAP3O94812 1187 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 KLHL18O94889 574 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 LTFP02788 710 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 SUPT20HL2P0C7V6 817 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 EEF2P13639 858 aaKnown RBP7.73□□□□□ -1.17
COPS7B-216ENST00000452375 ASCL5Q7RTU5 278 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 CPXCR1Q8N123 301 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 GIMAP8Q8ND71 665 aaPredicted RBP7.73□□□□□ -1.17
COPS7B-216ENST00000452375 PHOSPHO1Q8TCT1 267 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 MICAL1Q8TDZ2 1067 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 CLEC4DQ8WXI8 215 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 C1orf159Q96HA4 380 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 LMF1Q96S06 567 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 C17orf80Q9BSJ5 609 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 UPF3BQ9BZI7 483 aaKnown RBP7.73□□□□□ -1.17
COPS7B-216ENST00000452375 SH2D4AQ9H788 454 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 CCSER2Q9H7U1 834 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 DLL4Q9NR61 685 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 MCM9Q9NXL9 1143 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 ZFP69BQ9UJL9 534 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 DNAH14Q0VDD8 3507 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 SCN10AQ9Y5Y9 1956 aa7.73□□□□□ -1.17
COPS7B-216ENST00000452375 ZFHX4Q86UP3 3567 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 PNMA6EA0A0J9YXQ4 647 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 NPIPB8E9PQR5 432 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 ATP2A1O14983 1001 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 ZEB2O60315 1214 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 IGSF3O75054 1194 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 GJB5O95377 273 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 CKMP06732 381 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 VCPP55072 806 aaKnown RBP7.72□□□□□ -1.17
COPS7B-216ENST00000452375 TESK1Q15569 626 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 SMAD2Q15796 467 aaKnown RBP7.72□□□□□ -1.17
COPS7B-216ENST00000452375 TNNI3KQ59H18 835 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 TCEAL5Q5H9L2 206 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 CCDC158Q5M9N0 1113 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 TCTN3Q6NUS6 607 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 TAPT1Q6NXT6 567 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 Q6ZUG5 572 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 CERS3Q8IU89 383 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 ANKRD35Q8N283 1001 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 STPG3Q8N7X2 389 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 FAM133AQ8N9E0 248 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 DTX3Q8N9I9 347 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 PABPC5Q96DU9 382 aaKnown RBP7.72□□□□□ -1.17
COPS7B-216ENST00000452375 MRPL38Q96DV4 380 aaKnown RBP7.72□□□□□ -1.17
COPS7B-216ENST00000452375 ADOQ96SZ5 270 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 RAD9AQ99638 391 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 PRRX2Q99811 253 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 SLF1Q9BQI6 1058 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 RAVER2Q9HCJ3 691 aaKnown RBP7.72□□□□□ -1.17
COPS7B-216ENST00000452375 FPGT-TNNI3KV9GXZ4 949 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 ATG2AQ2TAZ0 1938 aa7.72□□□□□ -1.17
COPS7B-216ENST00000452375 KMT2BQ9UMN6 2715 aaPredicted RBP7.72□□□□□ -1.17
COPS7B-216ENST00000452375 TPRP12270 2363 aaKnown RBP7.71□□□□□ -1.17
COPS7B-216ENST00000452375 PROB1E7EW31 1015 aa7.71□□□□□ -1.18
COPS7B-216ENST00000452375 SSBP05455 408 aaKnown RBP eCLIP7.71□□□□□ -1.18
COPS7B-216ENST00000452375 COL6A2P12110 1019 aa7.71□□□□□ -1.18
COPS7B-216ENST00000452375 PURAQ00577 322 aaKnown RBP7.71□□□□□ -1.18
COPS7B-216ENST00000452375 G3BP1Q13283 466 aaKnown RBP eCLIP7.71□□□□□ -1.18
COPS7B-216ENST00000452375 CLUL1Q15846 466 aa7.71□□□□□ -1.18
COPS7B-216ENST00000452375 SKIDA1Q1XH10 827 aa7.71□□□□□ -1.18
COPS7B-216ENST00000452375 HS1BP3Q53T59 392 aa7.71□□□□□ -1.18
COPS7B-216ENST00000452375 SLC35F1Q5T1Q4 408 aa7.71□□□□□ -1.18
COPS7B-216ENST00000452375 EP400NLQ6ZTU2 488 aa7.71□□□□□ -1.18
COPS7B-216ENST00000452375 USP53Q70EK8 1073 aa7.71□□□□□ -1.18
COPS7B-216ENST00000452375 EEPD1Q7L9B9 569 aa7.71□□□□□ -1.18
COPS7B-216ENST00000452375 TRIM48Q8IWZ4 208 aa7.71□□□□□ -1.18
COPS7B-216ENST00000452375 FBXO16Q8IX29 292 aaPredicted RBP7.71□□□□□ -1.18
COPS7B-216ENST00000452375 SDR42E1Q8WUS8 393 aa7.71□□□□□ -1.18
COPS7B-216ENST00000452375 ATOH1Q92858 354 aaPredicted RBP7.71□□□□□ -1.18
COPS7B-216ENST00000452375 CTAGE1Q96RT6 745 aa7.71□□□□□ -1.18
COPS7B-216ENST00000452375 CDIP1Q9H305 208 aa7.71□□□□□ -1.18
COPS7B-216ENST00000452375 SEMA4AQ9H3S1 761 aa7.71□□□□□ -1.18
COPS7B-216ENST00000452375 SLC6A20Q9NP91 592 aa7.71□□□□□ -1.18
COPS7B-216ENST00000452375 GPR108Q9NPR9 543 aa7.71□□□□□ -1.18
COPS7B-216ENST00000452375 DBNLQ9UJU6 430 aaKnown RBP7.71□□□□□ -1.18
COPS7B-216ENST00000452375 HDAC5Q9UQL6 1122 aa7.71□□□□□ -1.18
COPS7B-216ENST00000452375 Q9Y3F1 56 aa7.71□□□□□ -1.18
COPS7B-216ENST00000452375 BAZ2AQ9UIF9 1905 aaKnown RBP7.71□□□□□ -1.18
COPS7B-216ENST00000452375 NCOR2Q9Y618 2525 aa7.71□□□□□ -1.18
COPS7B-216ENST00000452375 LCTP09848 1927 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms