RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 CD52P31358 61 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 MTF1Q14872 753 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 CTXN3Q4LDR2 81 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 KCTD16Q68DU8 428 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 CCDC137Q6PK04 289 aaKnown RBP7.4□□□□□ -1.22
RAB5B-201ENST00000360299 RAD9BQ6WBX8 426 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 DCP1BQ8IZD4 617 aaKnown RBP7.4□□□□□ -1.22
RAB5B-201ENST00000360299 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.4□□□□□ -1.22
RAB5B-201ENST00000360299 SLC35G2Q8TBE7 412 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 ZNF507Q8TCN5 953 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 CSGALNACT1Q8TDX6 532 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 PRPF31Q8WWY3 499 aaKnown RBP7.4□□□□□ -1.22
RAB5B-201ENST00000360299 NUDCD1Q96RS6 583 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 CYP4F11Q9HBI6 524 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 GTF3C4Q9UKN8 822 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 UBQLN1Q9UMX0 589 aaKnown RBP7.4□□□□□ -1.22
RAB5B-201ENST00000360299 TTI1O43156 1089 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 SRGAP2O75044 1071 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 ATP1A1P05023 1023 aaKnown RBP7.4□□□□□ -1.22
RAB5B-201ENST00000360299 PRLRP16471 622 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 NPTX2P47972 431 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 MRPS6P82932 125 aaKnown RBP7.4□□□□□ -1.22
RAB5B-201ENST00000360299 DUSP28Q4G0W2 176 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 C4orf22Q6V702 233 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 TTC30BQ8N4P2 665 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 RNF25Q96BH1 459 aaPredicted RBP7.4□□□□□ -1.22
RAB5B-201ENST00000360299 ZNF518BQ9C0D4 1074 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 FAM96AQ9H5X1 160 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 MRPL17Q9NRX2 175 aaKnown RBP7.4□□□□□ -1.22
RAB5B-201ENST00000360299 KLHL8Q9P2G9 620 aaPredicted RBP7.4□□□□□ -1.22
RAB5B-201ENST00000360299 SNX9Q9Y5X1 595 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 BTAF1O14981 1849 aa7.4□□□□□ -1.22
RAB5B-201ENST00000360299 BUB1BO60566 1050 aaPredicted RBP7.4□□□□□ -1.23
RAB5B-201ENST00000360299 APOEP02649 317 aa7.4□□□□□ -1.23
RAB5B-201ENST00000360299 RALAP11233 206 aa7.4□□□□□ -1.23
RAB5B-201ENST00000360299 HEATR6Q6AI08 1181 aaKnown RBP7.4□□□□□ -1.23
RAB5B-201ENST00000360299 FOXR2Q6PJQ5 311 aa7.4□□□□□ -1.23
RAB5B-201ENST00000360299 RAPH1Q70E73 1250 aa7.4□□□□□ -1.23
RAB5B-201ENST00000360299 ATP8B4Q8TF62 1192 aa7.4□□□□□ -1.23
RAB5B-201ENST00000360299 SNF8Q96H20 258 aa7.4□□□□□ -1.23
RAB5B-201ENST00000360299 MTMR9Q96QG7 549 aa7.4□□□□□ -1.23
RAB5B-201ENST00000360299 WDR24Q96S15 920 aa7.4□□□□□ -1.23
RAB5B-201ENST00000360299 ZCCHC17Q9NP64 241 aaKnown RBP7.4□□□□□ -1.23
RAB5B-201ENST00000360299 NOVA2Q9UNW9 492 aaKnown RBP7.4□□□□□ -1.23
RAB5B-201ENST00000360299 ZNF536O15090 1300 aa7.4□□□□□ -1.23
RAB5B-201ENST00000360299 NRCAMQ92823 1304 aa7.4□□□□□ -1.23
RAB5B-201ENST00000360299 SH3BP5O60239 455 aa7.4□□□□□ -1.23
RAB5B-201ENST00000360299 S100BP04271 92 aaPredicted RBP7.4□□□□□ -1.23
RAB5B-201ENST00000360299 RAB27AP51159 221 aa7.4□□□□□ -1.23
RAB5B-201ENST00000360299 TSNAXIP1Q2TAA8 658 aa7.4□□□□□ -1.23
RAB5B-201ENST00000360299 ATG16L1Q676U5 607 aa7.4□□□□□ -1.23
RAB5B-201ENST00000360299 TATDN1Q6P1N9 297 aa7.4□□□□□ -1.23
RAB5B-201ENST00000360299 TRIM65Q6PJ69 517 aa7.4□□□□□ -1.23
RAB5B-201ENST00000360299 NOP9Q86U38 636 aaKnown RBP7.4□□□□□ -1.23
RAB5B-201ENST00000360299 PPP1R2P1Q96PQ5 205 aa7.4□□□□□ -1.23
RAB5B-201ENST00000360299 DDX50Q9BQ39 737 aaKnown RBP7.4□□□□□ -1.23
RAB5B-201ENST00000360299 VIPAS39Q9H9C1 493 aa7.4□□□□□ -1.23
RAB5B-201ENST00000360299 IRAK4Q9NWZ3 460 aa7.4□□□□□ -1.23
RAB5B-201ENST00000360299 PPP1R12AO14974 1030 aaPredicted RBP7.39□□□□□ -1.23
RAB5B-201ENST00000360299 GPC4O75487 556 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 ITGBL1O95965 494 aaPredicted RBP7.39□□□□□ -1.23
RAB5B-201ENST00000360299 GSTA1P08263 222 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 GSTA2P09210 222 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 CD44P16070 742 aaKnown RBP7.39□□□□□ -1.23
RAB5B-201ENST00000360299 CCT5P48643 541 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 TMED2Q15363 201 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 MAPRE1Q15691 268 aaKnown RBP7.39□□□□□ -1.23
RAB5B-201ENST00000360299 MPZL3Q6UWV2 235 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 SH3RF1Q7Z6J0 888 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 SCFD1Q8WVM8 642 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 EPAS1Q99814 870 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 HEMGNQ9BXL5 484 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 CARD9Q9H257 536 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 SAYSD1Q9NPB0 183 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 BFARQ9NZS9 450 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 SENP1Q9P0U3 644 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 HPCAL4Q9UM19 191 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 A0A087WUV0 522 aaPredicted RBP7.39□□□□□ -1.23
RAB5B-201ENST00000360299 PSMD3O43242 534 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 HMBSP08397 361 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 MX2P20592 715 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 CA4P22748 312 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 RARRES1P49788 294 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 FAM171A1Q5VUB5 890 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 RWDD4Q6NW29 188 aaKnown RBP7.39□□□□□ -1.23
RAB5B-201ENST00000360299 TAB3Q8N5C8 712 aaPredicted RBP7.39□□□□□ -1.23
RAB5B-201ENST00000360299 GBP7Q8N8V2 638 aaPredicted RBP7.39□□□□□ -1.23
RAB5B-201ENST00000360299 SNX19Q92543 992 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 GMLQ99445 158 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 FTHL17Q9BXU8 183 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 DDX47Q9H0S4 455 aaKnown RBP7.39□□□□□ -1.23
RAB5B-201ENST00000360299 SEMA6BQ9H3T3 888 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 PLAAQ9Y263 795 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 FARP1Q9Y4F1 1045 aaPredicted RBP7.39□□□□□ -1.23
RAB5B-201ENST00000360299 ARVCFO00192 962 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 MOCS2O96007 188 aaPredicted RBP7.39□□□□□ -1.23
RAB5B-201ENST00000360299 PON1P27169 355 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 HSD17B4P51659 736 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 PMS2P54278 862 aa7.39□□□□□ -1.23
RAB5B-201ENST00000360299 EPHB3P54753 998 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms