RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 KRT7P08729 469 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 IFIT5Q13325 482 aaKnown RBP9.02□□□□□ -0.97
TDP1-201ENST00000335725 MAPK6Q16659 721 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 USP41Q3LFD5 358 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 USPL1Q5W0Q7 1092 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 DHDDSQ86SQ9 333 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 PRUNE1Q86TP1 453 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 FAM9CQ8IZT9 166 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 ANKRD42Q8N9B4 389 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 PMEPA1Q969W9 287 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 CEP170P1Q96L14 293 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 YME1L1Q96TA2 773 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 S100A14Q9HCY8 104 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 GIMAP4Q9NUV9 329 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 FLT1P17948 1338 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 PCP4L1A6NKN8 68 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 NCAM2O15394 837 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 RANBP6O60518 1105 aaKnown RBP9.02□□□□□ -0.97
TDP1-201ENST00000335725 TLR2O60603 784 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 KRT3P12035 628 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 SLC26A3P40879 764 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 HADHAP40939 763 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 ESRRGP62508 458 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 TMPRSS15P98073 1019 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 ECT2LQ008S8 904 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 IFITM2Q01629 132 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 BTKQ06187 659 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 CYP2A13Q16696 494 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 RNF19BQ6ZMZ0 732 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 RALGPS2Q86X27 583 aaPredicted RBP9.02□□□□□ -0.97
TDP1-201ENST00000335725 OR10Z1Q8NGY1 313 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 DACT3Q96B18 629 aaPredicted RBP9.02□□□□□ -0.97
TDP1-201ENST00000335725 NRBF2Q96F24 287 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 CYTH2Q99418 400 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 TRIM15Q9C019 465 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 ABCG4Q9H172 646 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 POLHQ9Y253 713 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 CRYBG1Q9Y4K1 1723 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 A0A1W2PQJ5 194 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 ZNF839A8K0R7 811 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 BUD23O43709 281 aaKnown RBP9.02□□□□□ -0.97
TDP1-201ENST00000335725 COL6A1P12109 1028 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 PRKAR1BP31321 381 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 HSD17B2P37059 387 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 SRP54P61011 504 aaKnown RBP9.02□□□□□ -0.97
TDP1-201ENST00000335725 SP140Q13342 867 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 PTPAQ15257 358 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 DGKDQ16760 1214 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 SHEQ5VZ18 495 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 NANOGP8Q6NSW7 305 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 REM2Q8IYK8 340 aaPredicted RBP9.02□□□□□ -0.97
TDP1-201ENST00000335725 TTLQ8NG68 377 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 ACTRT1Q8TDG2 376 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 FAM172AQ8WUF8 416 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 REXO5Q96IC2 774 aaKnown RBP9.02□□□□□ -0.97
TDP1-201ENST00000335725 LRGUKQ96M69 825 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 NLRP4Q96MN2 994 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 ZNF641Q96N77 438 aaPredicted RBP9.02□□□□□ -0.97
TDP1-201ENST00000335725 SECISBP2Q96T21 854 aaKnown RBP9.02□□□□□ -0.97
TDP1-201ENST00000335725 ACAT2Q9BWD1 397 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 TP63Q9H3D4 680 aaPredicted RBP9.02□□□□□ -0.97
TDP1-201ENST00000335725 PARP2Q9UGN5 583 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 DAPK2Q9UIK4 370 aa9.02□□□□□ -0.97
TDP1-201ENST00000335725 COL3A1P02461 1466 aaPredicted RBP9.02□□□□□ -0.97
TDP1-201ENST00000335725 PLCH2O75038 1416 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 EVPLLA8MZ36 301 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 PGRMC1O00264 195 aaKnown RBP9.01□□□□□ -0.97
TDP1-201ENST00000335725 C2CD2LO14523 706 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 CASQ2O14958 399 aaPredicted RBP9.01□□□□□ -0.97
TDP1-201ENST00000335725 KLHL41O60662 606 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 RHOBTB3O94955 611 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 PLCG1P19174 1290 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 EEF1GP26641 437 aaKnown RBP9.01□□□□□ -0.97
TDP1-201ENST00000335725 PTPN9P43378 593 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 APOFQ13790 326 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 SCARA3Q6AZY7 606 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 OGFOD2Q6N063 350 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 CGB2Q6NT52 195 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 APOA5Q6Q788 366 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 GRPEL2Q8TAA5 225 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 KBTBD7Q8WVZ9 684 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 FAM161BQ96MY7 647 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 RBM14Q96PK6 669 aaKnown RBP9.01□□□□□ -0.97
TDP1-201ENST00000335725 SYTL2Q9HCH5 934 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.01□□□□□ -0.97
TDP1-201ENST00000335725 CTNND2Q9UQB3 1225 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.01□□□□□ -0.97
TDP1-201ENST00000335725 MYH2Q9UKX2 1941 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 IFT172Q9UG01 1749 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 ARHGEF10O15013 1369 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 A0A087WZG4 1122 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 FOXN3O00409 490 aaPredicted RBP9.01□□□□□ -0.97
TDP1-201ENST00000335725 SNPHO15079 494 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 MAGEB2O15479 319 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 HLA-DRAP01903 254 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 FAM58BPP0C7Q3 252 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 ZNF23P17027 643 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 MAPKAPK2P49137 400 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 ETV1P50549 477 aa9.01□□□□□ -0.97
TDP1-201ENST00000335725 ALDH18A1P54886 795 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms