RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 RGS4P49798 205 aa12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 CCDC15Q0P6D6 951 aa12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 C10orf120Q5SQS8 335 aa12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 NAPEPLDQ6IQ20 393 aa12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 MPZL3Q6UWV2 235 aa12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 CDR2LQ86X02 465 aaPredicted RBP12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 JAMLQ86YT9 394 aa12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 CARD9Q9H257 536 aa12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 TSR3Q9UJK0 312 aaKnown RBP12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 DCDC2CA8MYV0 355 aa12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 H0Y3Z8 333 aa12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 POLBP06746 335 aa12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 ARP10275 920 aa12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 TWF1Q12792 350 aa12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 FOXD4Q12950 439 aaPredicted RBP12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 SEC23AQ15436 765 aa12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 TDRD10Q5VZ19 366 aaKnown RBP12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 SGSM3Q96HU1 749 aa12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 PDCD2LQ9BRP1 358 aa12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 EPC1Q9H2F5 836 aa12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 VIPAS39Q9H9C1 493 aa12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 MRGBPQ9NV56 204 aa12.52□□□□□ -0.41
AMBRA1-201ENST00000314845 KLRC1P26715 233 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 CLCN3P51790 818 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 PCNX4Q63HM2 1172 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 LRIG3Q6UXM1 1119 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 RIOX1Q9H6W3 641 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 SALL1Q9NSC2 1324 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 DDTLA6NHG4 134 aaPredicted RBP12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 NPTX2P47972 431 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 ARHGAP15Q53QZ3 475 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 ACAD10Q6JQN1 1059 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 ATP6V0D2Q8N8Y2 350 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 ABI2Q9NYB9 513 aaPredicted RBP12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 FAM205AQ6ZU69 1335 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 ZNF263O14978 683 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 TGFB3P10600 412 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 VEGFAP15692 232 aaPredicted RBP12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 EPHB2P29323 1055 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 PEX19P40855 299 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 BFSP2Q13515 415 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 TMEM132BQ14DG7 1078 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 NBPF12Q5TAG4 269 aaPredicted RBP12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 TRIM65Q6PJ69 517 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 ANKS3Q6ZW76 656 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 C4orf19Q8IY42 314 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 FAM161BQ96MY7 647 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 METTL5Q9NRN9 209 aaKnown RBP12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 DIP2BQ9P265 1576 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 KPNA6O60684 536 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 F9P00740 461 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 VDRP11473 427 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 KRT4P19013 534 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 STIP1P31948 543 aaKnown RBP12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 RRM2BQ7LG56 351 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 C1orf131Q8NDD1 294 aaKnown RBP12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 DNERQ8NFT8 737 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 COG4Q9H9E3 785 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 ANLNQ9NQW6 1124 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 KBTBD4Q9NVX7 518 aa12.51□□□□□ -0.41
AMBRA1-201ENST00000314845 H7C4K7 107 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 NKRFO15226 690 aaKnown RBP eCLIP12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 Q4G0T1 1027 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 TMEM259Q4ZIN3 620 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 EPC2Q52LR7 807 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 METTL7BQ6UX53 244 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 PGBD3Q8N328 593 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 TMC2Q8TDI7 906 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 OTUB1Q96FW1 271 aaPredicted RBP12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 DDIT4Q9NX09 232 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 CFAP73A6NFT4 308 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 CXCL11O14625 94 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 PPP1R37O75864 691 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 EEF1DP29692 281 aaKnown RBP12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 SLC11A2P49281 568 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 AP2B1P63010 937 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 STX3Q13277 289 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 MYBPC2Q14324 1141 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 COBLL1Q53SF7 1204 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 CCNI2Q6ZMN8 369 aaPredicted RBP12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 CBWD2Q8IUF1 395 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 TEKT4Q8WW24 435 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 KIAA1683Q9H0B3 1180 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 GPRC5CQ9NQ84 441 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 MEGF6O75095 1541 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 GOLGA8RI6L899 631 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 HNRNPCL1O60812 293 aaKnown RBP12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 LRG1P02750 347 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 TFRCP02786 760 aaKnown RBP12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 SNRPAP09012 282 aaKnown RBP12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 ACO1P21399 889 aaKnown RBP12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 SYTL5Q8TDW5 730 aaPredicted RBP12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 ERP44Q9BS26 406 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 FAM129AQ9BZQ8 928 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 SLC7A5P2Q9GIP4 190 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 VPS33BQ9H267 617 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 RUBCNLQ9H714 662 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 CYP4F11Q9HBI6 524 aa12.5□□□□□ -0.41
AMBRA1-201ENST00000314845 CHCHD3Q9NX63 227 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms