RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A YKL075CP36083 450 aa6.36□□□□□ -1.39
TGA1tA(UGC)A YNL194CP40169 301 aa6.36□□□□□ -1.39
TGA1tA(UGC)A SYG1P40528 902 aa6.36□□□□□ -1.39
TGA1tA(UGC)A TOS8P53147 276 aa6.36□□□□□ -1.39
TGA1tA(UGC)A VPS28Q02767 242 aa6.36□□□□□ -1.39
TGA1tA(UGC)A EST3Q03096 181 aa6.36□□□□□ -1.39
TGA1tA(UGC)A NDE2Q07500 545 aa6.36□□□□□ -1.39
TGA1tA(UGC)A PAM18Q07914 168 aa6.36□□□□□ -1.39
TGA1tA(UGC)A IRC23Q08416 157 aa6.36□□□□□ -1.39
TGA1tA(UGC)A RAD28Q12021 506 aa6.36□□□□□ -1.39
TGA1tA(UGC)A YJR112W-AQ3E743 109 aa6.36□□□□□ -1.39
TGA1tA(UGC)A OLE1P21147 510 aaKnown RBP6.35□□□□□ -1.39
TGA1tA(UGC)A MRPL38P35996 138 aaPredicted RBP6.35□□□□□ -1.39
TGA1tA(UGC)A PRM3Q08931 133 aa6.35□□□□□ -1.39
TGA1tA(UGC)A ATG31Q12421 196 aa6.35□□□□□ -1.39
TGA1tA(UGC)A YBR144CP34215 104 aa6.34□□□□□ -1.39
TGA1tA(UGC)A YBR184WP38299 523 aa6.34□□□□□ -1.39
TGA1tA(UGC)A MIC12P38341 106 aa6.34□□□□□ -1.39
TGA1tA(UGC)A YPT31P38555 223 aaKnown RBP6.34□□□□□ -1.39
TGA1tA(UGC)A LSM12P38828 187 aaKnown RBP6.34□□□□□ -1.39
TGA1tA(UGC)A SSU72P53538 206 aaPredicted RBP6.34□□□□□ -1.39
TGA1tA(UGC)A YLR224WQ05947 369 aa6.34□□□□□ -1.39
TGA1tA(UGC)A YPS3Q12303 508 aa6.34□□□□□ -1.39
TGA1tA(UGC)A ERV1P27882 189 aa6.33□□□□□ -1.4
TGA1tA(UGC)A YKL162CP36052 402 aa6.33□□□□□ -1.4
TGA1tA(UGC)A YAR068WP39564 161 aa6.33□□□□□ -1.4
TGA1tA(UGC)A HCH1P53834 153 aa6.33□□□□□ -1.4
TGA1tA(UGC)A YIF1P53845 314 aaKnown RBP6.33□□□□□ -1.4
TGA1tA(UGC)A COA2Q3E823 68 aa6.33□□□□□ -1.4
TGA1tA(UGC)A TRP4P07285 380 aaPredicted RBP6.32□□□□□ -1.4
TGA1tA(UGC)A ELO2P25358 347 aa6.32□□□□□ -1.4
TGA1tA(UGC)A YGR210CP42942 411 aa6.32□□□□□ -1.4
TGA1tA(UGC)A DYN2Q02647 92 aa6.32□□□□□ -1.4
TGA1tA(UGC)A FRQ1Q06389 190 aa6.32□□□□□ -1.4
TGA1tA(UGC)A YPL264CQ08980 353 aa6.32□□□□□ -1.4
TGA1tA(UGC)A PET494P07390 489 aaPredicted RBP6.31□□□□□ -1.4
TGA1tA(UGC)A GLY1P37303 387 aaKnown RBP6.31□□□□□ -1.4
TGA1tA(UGC)A TFB5Q3E7C1 72 aaPredicted RBP6.31□□□□□ -1.4
TGA1tA(UGC)A TDH1P00360 332 aaKnown RBP6.3□□□□□ -1.4
TGA1tA(UGC)A PPQ1P32945 549 aa6.3□□□□□ -1.4
TGA1tA(UGC)A RPL13BP40212 199 aaKnown RBP6.3□□□□□ -1.4
TGA1tA(UGC)A YIR035CP40579 254 aa6.3□□□□□ -1.4
TGA1tA(UGC)A YMR181CQ03231 154 aa6.3□□□□□ -1.4
TGA1tA(UGC)A YOR352WQ08816 343 aa6.3□□□□□ -1.4
TGA1tA(UGC)A AIM45Q12480 344 aaKnown RBP6.3□□□□□ -1.4
TGA1tA(UGC)A PRM4Q12498 284 aa6.3□□□□□ -1.4
TGA1tA(UGC)A RPL13AQ12690 199 aaPredicted RBP6.3□□□□□ -1.4
TGA1tA(UGC)A URA5P13298 226 aaKnown RBP6.29□□□□□ -1.4
TGA1tA(UGC)A MDM10P18409 493 aa6.29□□□□□ -1.4
TGA1tA(UGC)A DOG2P38773 246 aa6.29□□□□□ -1.4
TGA1tA(UGC)A DOG1P38774 246 aa6.29□□□□□ -1.4
TGA1tA(UGC)A WSS1P38838 269 aa6.29□□□□□ -1.4
TGA1tA(UGC)A YGR018CP53211 109 aa6.29□□□□□ -1.4
TGA1tA(UGC)A CPD1P53314 239 aa6.29□□□□□ -1.4
TGA1tA(UGC)A CAB4P53332 305 aa6.29□□□□□ -1.4
TGA1tA(UGC)A CKS1P20486 150 aaKnown RBP6.28□□□□□ -1.4
TGA1tA(UGC)A RTG1P32607 177 aa6.28□□□□□ -1.4
TGA1tA(UGC)A PDC2P32896 925 aa6.28□□□□□ -1.4
TGA1tA(UGC)A NSA2P40078 261 aaKnown RBP6.28□□□□□ -1.4
TGA1tA(UGC)A HXT14P42833 540 aa6.28□□□□□ -1.4
TGA1tA(UGC)A SWT21P53873 357 aaPredicted RBP6.28□□□□□ -1.4
TGA1tA(UGC)A YPR013CQ12145 317 aa6.28□□□□□ -1.4
TGA1tA(UGC)A POC4Q12245 148 aaPredicted RBP6.28□□□□□ -1.4
TGA1tA(UGC)A YLR122CQ12312 125 aa6.28□□□□□ -1.4
TGA1tA(UGC)A TAR1Q8TGM6 124 aa6.28□□□□□ -1.4
TGA1tA(UGC)A ISN1Q99312 450 aa6.28□□□□□ -1.4
TGA1tA(UGC)A CYC3P06182 269 aa6.27□□□□□ -1.41
TGA1tA(UGC)A MRS3P10566 314 aa6.27□□□□□ -1.41
TGA1tA(UGC)A AUA1P32450 94 aa6.27□□□□□ -1.41
TGA1tA(UGC)A NPL6P32832 435 aa6.27□□□□□ -1.41
TGA1tA(UGC)A SLM6P38343 150 aa6.27□□□□□ -1.41
TGA1tA(UGC)A YJL027CP47063 138 aaPredicted RBP6.27□□□□□ -1.41
TGA1tA(UGC)A GPI15P53961 229 aa6.27□□□□□ -1.41
TGA1tA(UGC)A RXT3Q07458 294 aa6.27□□□□□ -1.41
TGA1tA(UGC)A RRT7Q07829 113 aa6.27□□□□□ -1.41
TGA1tA(UGC)A USV1Q12132 391 aa6.27□□□□□ -1.41
TGA1tA(UGC)A SEC22P22214 214 aa6.26□□□□□ -1.41
TGA1tA(UGC)A YCR022CP25620 114 aa6.26□□□□□ -1.41
TGA1tA(UGC)A TIP1P27654 210 aaPredicted RBP6.26□□□□□ -1.41
TGA1tA(UGC)A POP5P28005 173 aa6.26□□□□□ -1.41
TGA1tA(UGC)A YBL071CP38185 102 aa6.26□□□□□ -1.41
TGA1tA(UGC)A CDS1P38221 457 aa6.26□□□□□ -1.41
TGA1tA(UGC)A QDR3P38227 689 aa6.26□□□□□ -1.41
TGA1tA(UGC)A IMD2P38697 523 aaKnown RBP6.26□□□□□ -1.41
TGA1tA(UGC)A BDH1P39714 382 aa6.26□□□□□ -1.41
TGA1tA(UGC)A YMR082CQ04276 118 aa6.26□□□□□ -1.41
TGA1tA(UGC)A DCS1Q06151 350 aa6.26□□□□□ -1.41
TGA1tA(UGC)A TIM18Q08749 192 aa6.26□□□□□ -1.41
TGA1tA(UGC)A FPR2P32472 135 aa6.25□□□□□ -1.41
TGA1tA(UGC)A ALK2P32789 676 aaPredicted RBP6.25□□□□□ -1.41
TGA1tA(UGC)A SDH4P37298 181 aa6.25□□□□□ -1.41
TGA1tA(UGC)A RTC3P38804 111 aaPredicted RBP6.25□□□□□ -1.41
TGA1tA(UGC)A MPC2P38857 129 aa6.25□□□□□ -1.41
TGA1tA(UGC)A YEA6P39953 335 aa6.25□□□□□ -1.41
TGA1tA(UGC)A GLE2P40066 365 aa6.25□□□□□ -1.41
TGA1tA(UGC)A CAX4P53223 239 aa6.25□□□□□ -1.41
TGA1tA(UGC)A YAP1802P53309 568 aa6.25□□□□□ -1.41
TGA1tA(UGC)A NCE103P53615 221 aa6.25□□□□□ -1.41
TGA1tA(UGC)A ACT1P60010 375 aaKnown RBP6.25□□□□□ -1.41
TGA1tA(UGC)A YMR090WQ04304 227 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 49 ms