RNA–Protein interactions for RNA: YPR163C

TIF3, Transcript of Translation initiation factor eIF-4B, yeast

Gene TIF3, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF3	YPR163C	AHT1	P29589	182 aa		6.69	□□□□□ -1.34
TIF3	YPR163C	MRPL39	P36533	70 aa		6.69	□□□□□ -1.34
TIF3	YPR163C	AVT5	P38176	459 aa		6.69	□□□□□ -1.34
TIF3	YPR163C	LSM4	P40070	187 aa	Known RBP	6.69	□□□□□ -1.34
TIF3	YPR163C	TTI2	P47168	421 aa		6.69	□□□□□ -1.34
TIF3	YPR163C	RIB4	P50861	169 aa	Predicted RBP	6.69	□□□□□ -1.34
TIF3	YPR163C	UPS1	Q05776	175 aa		6.69	□□□□□ -1.34
TIF3	YPR163C	HRD1	Q08109	551 aa		6.69	□□□□□ -1.34
TIF3	YPR163C	MED7	Q08278	222 aa		6.69	□□□□□ -1.34
TIF3	YPR163C	ATG5	Q12380	294 aa		6.69	□□□□□ -1.34
TIF3	YPR163C	PAU19	P0CE85	124 aa		6.68	□□□□□ -1.34
TIF3	YPR163C	PAU21	P0CE86	164 aa		6.68	□□□□□ -1.34
TIF3	YPR163C	PAU22	P0CE87	164 aa		6.68	□□□□□ -1.34
TIF3	YPR163C	PAU3	P25610	124 aa		6.68	□□□□□ -1.34
TIF3	YPR163C	SHB17	P36136	271 aa	Known RBP	6.68	□□□□□ -1.34
TIF3	YPR163C	RTC3	P38804	111 aa	Predicted RBP	6.68	□□□□□ -1.34
TIF3	YPR163C	PCL7	P40186	285 aa		6.68	□□□□□ -1.34
TIF3	YPR163C	TAX4	P47030	604 aa		6.68	□□□□□ -1.34
TIF3	YPR163C	PRY1	P47032	299 aa		6.68	□□□□□ -1.34
TIF3	YPR163C	GEP7	P53171	287 aa		6.68	□□□□□ -1.34
TIF3	YPR163C	YDR391C	Q04170	232 aa		6.68	□□□□□ -1.34
TIF3	YPR163C	RIM9	Q04734	239 aa		6.68	□□□□□ -1.34
TIF3	YPR163C	MPD1	Q12404	318 aa	Known RBP	6.68	□□□□□ -1.34
TIF3	YPR163C	YOR192C-C	Q3E736	78 aa		6.68	□□□□□ -1.34
TIF3	YPR163C	YBR056W-A	I2HB52	66 aa		6.67	□□□□□ -1.34
TIF3	YPR163C	MRPL28	P36527	147 aa		6.67	□□□□□ -1.34
TIF3	YPR163C	PTC7	P38797	343 aa		6.67	□□□□□ -1.34
TIF3	YPR163C	IRC22	P40006	225 aa		6.67	□□□□□ -1.34
TIF3	YPR163C	GET2	P40056	285 aa		6.67	□□□□□ -1.34
TIF3	YPR163C	PAU5	P43575	122 aa		6.67	□□□□□ -1.34
TIF3	YPR163C	YGL185C	P53100	379 aa		6.67	□□□□□ -1.34
TIF3	YPR163C	SMM1	P53720	384 aa	Known RBP	6.67	□□□□□ -1.34
TIF3	YPR163C	RCE1	Q03530	315 aa		6.67	□□□□□ -1.34
TIF3	YPR163C	DFG5	Q05031	458 aa		6.67	□□□□□ -1.34
TIF3	YPR163C	NCE102	Q12207	173 aa	RIP-Chip data	6.67	□□□□□ -1.34	not detected
TIF3	YPR163C	Q0144	Q9ZZW2	109 aa		6.67	□□□□□ -1.34
TIF3	YPR163C	TY1A-H	P0C2I4	478 aa	Known RBP	6.66	□□□□□ -1.34
TIF3	YPR163C	NHP6A	P11632	93 aa	Known RBP	6.66	□□□□□ -1.34
TIF3	YPR163C	FCY2	P17064	533 aa		6.66	□□□□□ -1.34
TIF3	YPR163C	SEC62	P21825	274 aa		6.66	□□□□□ -1.34
TIF3	YPR163C	PIG2	P40187	538 aa		6.66	□□□□□ -1.34
TIF3	YPR163C	OST1	P41543	476 aa	Known RBP	6.66	□□□□□ -1.34
TIF3	YPR163C	EGT2	P42835	1041 aa		6.66	□□□□□ -1.34
TIF3	YPR163C	APS2	Q00381	147 aa		6.66	□□□□□ -1.34
TIF3	YPR163C	YPL067C	Q02754	198 aa		6.66	□□□□□ -1.34
TIF3	YPR163C	YDR209C	Q03480	137 aa		6.66	□□□□□ -1.34
TIF3	YPR163C	CUE4	Q04201	117 aa	Predicted RBP	6.66	□□□□□ -1.34
TIF3	YPR163C	YOP1	Q12402	180 aa		6.66	□□□□□ -1.34
TIF3	YPR163C	RAX2	Q12465	1220 aa		6.66	□□□□□ -1.34
TIF3	YPR163C	YBR255C-A	Q3E776	120 aa		6.66	□□□□□ -1.34
TIF3	YPR163C	COA6	Q3E846	104 aa		6.66	□□□□□ -1.34
TIF3	YPR163C	RPL35A	P0CX84	120 aa	Known RBP	6.65	□□□□□ -1.35
TIF3	YPR163C	RPL35B	P0CX85	120 aa	Known RBP	6.65	□□□□□ -1.35
TIF3	YPR163C	MIA40	P36046	403 aa		6.65	□□□□□ -1.35
TIF3	YPR163C	YHR138C	P38841	114 aa	Predicted RBP	6.65	□□□□□ -1.35
TIF3	YPR163C	TAF4	P50105	388 aa		6.65	□□□□□ -1.35
TIF3	YPR163C	YGL260W	P53056	76 aa		6.65	□□□□□ -1.35
TIF3	YPR163C	ERV14	P53173	138 aa		6.65	□□□□□ -1.35
TIF3	YPR163C	YGR050C	P53231	118 aa		6.65	□□□□□ -1.35
TIF3	YPR163C	DAD3	P69850	94 aa		6.65	□□□□□ -1.35
TIF3	YPR163C	FRQ1	Q06389	190 aa		6.65	□□□□□ -1.35
TIF3	YPR163C	YOL118C	Q08259	102 aa		6.65	□□□□□ -1.35
TIF3	YPR163C	RRS1	Q08746	203 aa	Known RBP	6.65	□□□□□ -1.35
TIF3	YPR163C	RPS25B	P0C0T4	108 aa	Known RBP	6.64	□□□□□ -1.35
TIF3	YPR163C	RPB10	P22139	70 aa		6.64	□□□□□ -1.35
TIF3	YPR163C	MRPS5	P33759	307 aa		6.64	□□□□□ -1.35
TIF3	YPR163C	YKL107W	P34251	309 aa		6.64	□□□□□ -1.35
TIF3	YPR163C	COX15	P40086	486 aa		6.64	□□□□□ -1.35
TIF3	YPR163C	ATG27	P46989	271 aa		6.64	□□□□□ -1.35
TIF3	YPR163C	XPT1	P47165	209 aa		6.64	□□□□□ -1.35
TIF3	YPR163C	YDC1	Q02896	317 aa		6.64	□□□□□ -1.35
TIF3	YPR163C	LIP2	Q06005	328 aa		6.64	□□□□□ -1.35
TIF3	YPR163C	ERV2	Q12284	196 aa		6.64	□□□□□ -1.35
TIF3	YPR163C	RPS25A	Q3E792	108 aa	Predicted RBP	6.64	□□□□□ -1.35
TIF3	YPR163C	MEC1	P38111	2368 aa		6.64	□□□□□ -1.35
TIF3	YPR163C	URA5	P13298	226 aa	Known RBP	6.63	□□□□□ -1.35
TIF3	YPR163C	COQ3	P27680	312 aa		6.63	□□□□□ -1.35
TIF3	YPR163C	AFR1	P33304	620 aa		6.63	□□□□□ -1.35
TIF3	YPR163C	YKL075C	P36083	450 aa		6.63	□□□□□ -1.35
TIF3	YPR163C	YGR269W	P40326	108 aa		6.63	□□□□□ -1.35
TIF3	YPR163C	YIP5	P53108	310 aa		6.63	□□□□□ -1.35
TIF3	YPR163C	WSC2	P53832	503 aa		6.63	□□□□□ -1.35
TIF3	YPR163C	ATG4	P53867	494 aa		6.63	□□□□□ -1.35
TIF3	YPR163C	HSK3	P69852	69 aa		6.63	□□□□□ -1.35
TIF3	YPR163C	CYT2	Q00873	224 aa		6.63	□□□□□ -1.35
TIF3	YPR163C	DAL4	Q04895	635 aa		6.63	□□□□□ -1.35
TIF3	YPR163C	FIT3	Q08907	204 aa		6.63	□□□□□ -1.35
TIF3	YPR163C	ISU2	Q12056	156 aa		6.63	□□□□□ -1.35
TIF3	YPR163C	DCN1	Q12395	269 aa		6.63	□□□□□ -1.35
TIF3	YPR163C	SEC16	P48415	2195 aa	Known RBP	6.63	□□□□□ -1.35
TIF3	YPR163C	RPS22A	P0C0W1	130 aa	Known RBP	6.62	□□□□□ -1.35
TIF3	YPR163C	BGL2	P15703	313 aa	Known RBP	6.62	□□□□□ -1.35
TIF3	YPR163C	DAL3	P32459	195 aa		6.62	□□□□□ -1.35
TIF3	YPR163C	QDR3	P38227	689 aa		6.62	□□□□□ -1.35
TIF3	YPR163C	YER084W	P40057	128 aa		6.62	□□□□□ -1.35
TIF3	YPR163C	LOC1	P43586	204 aa	Predicted RBP	6.62	□□□□□ -1.35
TIF3	YPR163C	YNR040W	P53736	256 aa		6.62	□□□□□ -1.35
TIF3	YPR163C	YPL077C	Q02831	240 aa		6.62	□□□□□ -1.35
TIF3	YPR163C	RAF1	Q06891	181 aa		6.62	□□□□□ -1.35
TIF3	YPR163C	TMA17	Q12513	150 aa		6.62	□□□□□ -1.35

Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms