RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeast

Gene YOP1, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YOP1	YPR028W	YLR031W	Q07978	186 aa		0.76	□□□□□ -2.29
YOP1	YPR028W	YAR023C	D6VPM8	179 aa		0.75	□□□□□ -2.29
YOP1	YPR028W	MDM35	O60200	86 aa		0.75	□□□□□ -2.29
YOP1	YPR028W	VAR1	P02381	398 aa		0.75	□□□□□ -2.29
YOP1	YPR028W	SNF4	P12904	322 aa		0.75	□□□□□ -2.29
YOP1	YPR028W	EDC3	P39998	551 aa	Known RBP	0.75	□□□□□ -2.29
YOP1	YPR028W	YPL073C	P40323	161 aa		0.75	□□□□□ -2.29
YOP1	YPR028W	ARO8	P53090	500 aa	Known RBP	0.75	□□□□□ -2.29
YOP1	YPR028W	RTC4	P53850	401 aa		0.75	□□□□□ -2.29
YOP1	YPR028W	CWC27	Q02770	301 aa		0.75	□□□□□ -2.29
YOP1	YPR028W	YMR099C	Q03161	297 aa	Known RBP	0.75	□□□□□ -2.29
YOP1	YPR028W	SHH3	Q04487	196 aa		0.75	□□□□□ -2.29
YOP1	YPR028W	YLR036C	Q07986	203 aa		0.75	□□□□□ -2.29
YOP1	YPR028W	IGO2	Q9P305	131 aa		0.75	□□□□□ -2.29
YOP1	YPR028W	MTW1	P39731	289 aa		0.74	□□□□□ -2.29
YOP1	YPR028W	PDS1	P40316	373 aa	Predicted RBP	0.74	□□□□□ -2.29
YOP1	YPR028W	TMA22	P47089	198 aa	Predicted RBP	0.74	□□□□□ -2.29
YOP1	YPR028W	YJR111C	P47148	283 aa	Known RBP	0.74	□□□□□ -2.29
YOP1	YPR028W	TDA4	P47153	279 aa		0.74	□□□□□ -2.29
YOP1	YPR028W	UBC12	P52491	188 aa		0.74	□□□□□ -2.29
YOP1	YPR028W	YNL247W	P53852	767 aa	Known RBP	0.74	□□□□□ -2.29
YOP1	YPR028W	YNL184C	P53876	108 aa		0.74	□□□□□ -2.29
YOP1	YPR028W	DAD4	P69851	72 aa		0.74	□□□□□ -2.29
YOP1	YPR028W	ARO80	Q04052	950 aa		0.74	□□□□□ -2.29
YOP1	YPR028W	YMR315W	Q04869	349 aa	Known RBP	0.74	□□□□□ -2.29
YOP1	YPR028W	YOL014W	Q08110	124 aa		0.74	□□□□□ -2.29
YOP1	YPR028W	IRC23	Q08416	157 aa		0.74	□□□□□ -2.29
YOP1	YPR028W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.74	□□□□□ -2.29
YOP1	YPR028W	YML100W-A	Q8TGT0	57 aa		0.74	□□□□□ -2.29
YOP1	YPR028W	YIL177C	P40434	1758 aa		0.74	□□□□□ -2.29
YOP1	YPR028W	YJL225C	P40889	1758 aa		0.74	□□□□□ -2.29
YOP1	YPR028W	RAD9	P14737	1309 aa		0.73	□□□□□ -2.29
YOP1	YPR028W	CAF4	P36130	643 aa		0.73	□□□□□ -2.29
YOP1	YPR028W	YHL042W	P38729	150 aa		0.73	□□□□□ -2.29
YOP1	YPR028W	HYR1	P40581	163 aa	Known RBP	0.73	□□□□□ -2.29
YOP1	YPR028W	PRP11	Q07350	266 aa	Predicted RBP	0.73	□□□□□ -2.29
YOP1	YPR028W	YOL024W	Q08172	172 aa		0.73	□□□□□ -2.29
YOP1	YPR028W	CYR1	P08678	2026 aa	Known RBP	0.72	□□□□□ -2.29
YOP1	YPR028W	RPS24A	P0CX31	135 aa	Known RBP	0.72	□□□□□ -2.29
YOP1	YPR028W	RPS24B	P0CX32	135 aa	Known RBP	0.72	□□□□□ -2.29
YOP1	YPR028W	PHO85	P17157	305 aa		0.72	□□□□□ -2.29
YOP1	YPR028W	TAH1	P25638	111 aa	Predicted RBP	0.72	□□□□□ -2.29
YOP1	YPR028W	MGT1	P26188	188 aa		0.72	□□□□□ -2.29
YOP1	YPR028W	SFK1	P35735	353 aa		0.72	□□□□□ -2.29
YOP1	YPR028W	FMP23	P38231	175 aa		0.72	□□□□□ -2.29
YOP1	YPR028W	SHG1	P38337	142 aa		0.72	□□□□□ -2.29
YOP1	YPR028W	YHL018W	P38744	120 aa	Predicted RBP	0.72	□□□□□ -2.29
YOP1	YPR028W	HPA3	P39979	161 aa		0.72	□□□□□ -2.29
YOP1	YPR028W	CUP9	P41817	306 aa		0.72	□□□□□ -2.29
YOP1	YPR028W	YFL065C	P43539	102 aa		0.72	□□□□□ -2.29
YOP1	YPR028W	VPS71	Q03433	280 aa		0.72	□□□□□ -2.29
YOP1	YPR028W	NOC4	Q06512	552 aa	Predicted RBP	0.72	□□□□□ -2.29
YOP1	YPR028W	YPR013C	Q12145	317 aa		0.72	□□□□□ -2.29
YOP1	YPR028W	YPR014C	Q6B0W2	109 aa		0.72	□□□□□ -2.29
YOP1	YPR028W	UBR2	Q07963	1872 aa		0.71	□□□□□ -2.3
YOP1	YPR028W	COX8	P04039	78 aa		0.71	□□□□□ -2.3
YOP1	YPR028W	TIR1	P10863	254 aa		0.71	□□□□□ -2.3
YOP1	YPR028W	NSP1	P14907	823 aa	Known RBP	0.71	□□□□□ -2.3
YOP1	YPR028W	TRX3	P25372	127 aa		0.71	□□□□□ -2.3
YOP1	YPR028W	ADE1	P27616	306 aa		0.71	□□□□□ -2.3
YOP1	YPR028W	PAM17	P36147	197 aa		0.71	□□□□□ -2.3
YOP1	YPR028W	NSG1	P38837	291 aa		0.71	□□□□□ -2.3
YOP1	YPR028W	YEL067C	P39978	195 aa		0.71	□□□□□ -2.3
YOP1	YPR028W	SPC25	P40014	221 aa		0.71	□□□□□ -2.3
YOP1	YPR028W	SOK1	P40317	901 aa		0.71	□□□□□ -2.3
YOP1	YPR028W	YFH7	P43591	353 aa		0.71	□□□□□ -2.3
YOP1	YPR028W	YNL033W	P53964	284 aa		0.71	□□□□□ -2.3
YOP1	YPR028W	YMR007W	Q03675	126 aa		0.71	□□□□□ -2.3
YOP1	YPR028W	GRX3	Q03835	250 aa		0.71	□□□□□ -2.3
YOP1	YPR028W	YMR253C	Q04835	414 aa		0.71	□□□□□ -2.3
YOP1	YPR028W	RNH202	Q05635	350 aa		0.71	□□□□□ -2.3
YOP1	YPR028W	NAT3	Q06504	195 aa		0.71	□□□□□ -2.3
YOP1	YPR028W	YLR412C-A	Q3E742	68 aa		0.71	□□□□□ -2.3
YOP1	YPR028W	AQY2	P0CD90	149 aa		0.7	□□□□□ -2.3
YOP1	YPR028W	IDP1	P21954	428 aa	Known RBP	0.7	□□□□□ -2.3
YOP1	YPR028W	ARO7	P32178	256 aa		0.7	□□□□□ -2.3
YOP1	YPR028W	GSP2	P32836	220 aa	Known RBP	0.7	□□□□□ -2.3
YOP1	YPR028W	RPB7	P34087	171 aa		0.7	□□□□□ -2.3
YOP1	YPR028W	FMP32	P43557	207 aa		0.7	□□□□□ -2.3
YOP1	YPR028W	YFL019C	P43576	117 aa		0.7	□□□□□ -2.3
YOP1	YPR028W	ALB1	P47019	175 aa	Predicted RBP	0.7	□□□□□ -2.3
YOP1	YPR028W	HOP2	P53187	214 aa		0.7	□□□□□ -2.3
YOP1	YPR028W	THG1	P53215	237 aa	Known RBP	0.7	□□□□□ -2.3
YOP1	YPR028W	PGA1	P53896	198 aa		0.7	□□□□□ -2.3
YOP1	YPR028W	AIM34	Q03673	198 aa		0.7	□□□□□ -2.3
YOP1	YPR028W	UPS3	Q04006	179 aa		0.7	□□□□□ -2.3
YOP1	YPR028W	YMR252C	Q04814	134 aa		0.7	□□□□□ -2.3
YOP1	YPR028W	YET3	Q07451	203 aa		0.7	□□□□□ -2.3
YOP1	YPR028W	FIT2	Q08906	153 aa		0.7	□□□□□ -2.3
YOP1	YPR028W	YOR342C	Q12182	319 aa		0.7	□□□□□ -2.3
YOP1	YPR028W	YCR023C	P25351	611 aa		0.69	□□□□□ -2.3
YOP1	YPR028W	NSA2	P40078	261 aa	Known RBP	0.69	□□□□□ -2.3
YOP1	YPR028W	GIM3	P53900	129 aa		0.69	□□□□□ -2.3
YOP1	YPR028W	NRK1	P53915	240 aa		0.69	□□□□□ -2.3
YOP1	YPR028W	GRX5	Q02784	150 aa		0.69	□□□□□ -2.3
YOP1	YPR028W	GRX8	Q05926	109 aa		0.69	□□□□□ -2.3
YOP1	YPR028W	SHH4	Q06236	168 aa		0.69	□□□□□ -2.3
YOP1	YPR028W	MPD1	Q12404	318 aa	Known RBP	0.69	□□□□□ -2.3
YOP1	YPR028W	YHR212W-A	P0CX91	67 aa		0.68	□□□□□ -2.3
YOP1	YPR028W	APA2	P22108	325 aa		0.68	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 1809.8 ms