RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C AIM25P47140 327 aa5.69□□□□□ -1.5
UME1YPL139C IMD3P50095 523 aaKnown RBP5.69□□□□□ -1.5
UME1YPL139C FEX1Q08913 375 aa5.69□□□□□ -1.5
UME1YPL139C YPL199CQ08954 240 aa5.69□□□□□ -1.5
UME1YPL139C CMC2Q3E7A4 109 aa5.69□□□□□ -1.5
UME1YPL139C ILV5P06168 395 aaKnown RBP5.68□□□□□ -1.5
UME1YPL139C SUA5P32579 426 aa5.68□□□□□ -1.5
UME1YPL139C WSS1P38838 269 aa5.68□□□□□ -1.5
UME1YPL139C PHM8P40025 321 aa5.68□□□□□ -1.5
UME1YPL139C DFG10P40526 253 aa5.68□□□□□ -1.5
UME1YPL139C YDL183CP48569 320 aa5.68□□□□□ -1.5
UME1YPL139C RTT103Q05543 409 aa5.68□□□□□ -1.5
UME1YPL139C HOR7Q05827 59 aa5.68□□□□□ -1.5
UME1YPL139C PBP4Q07362 185 aaKnown RBP5.68□□□□□ -1.5
UME1YPL139C SCP1Q08873 200 aa5.68□□□□□ -1.5
UME1YPL139C ISN1Q99312 450 aa5.68□□□□□ -1.5
UME1YPL139C RNA14P25298 677 aaKnown RBP5.67□□□□□ -1.5
UME1YPL139C YPS1P32329 569 aa5.67□□□□□ -1.5
UME1YPL139C HYM1P32464 399 aa5.67□□□□□ -1.5
UME1YPL139C RAD23P32628 398 aaKnown RBP5.67□□□□□ -1.5
UME1YPL139C COS8P38723 381 aa5.67□□□□□ -1.5
UME1YPL139C SYG1P40528 902 aa5.67□□□□□ -1.5
UME1YPL139C YKE4P40544 346 aa5.67□□□□□ -1.5
UME1YPL139C CAB5Q03941 241 aa5.67□□□□□ -1.5
UME1YPL139C MED7Q08278 222 aa5.67□□□□□ -1.5
UME1YPL139C ATG5Q12380 294 aa5.67□□□□□ -1.5
UME1YPL139C SOD1P00445 154 aaKnown RBP5.67□□□□□ -1.5
UME1YPL139C HTB1P02293 131 aaKnown RBP5.67□□□□□ -1.5
UME1YPL139C FEN2P25621 512 aaKnown RBP5.67□□□□□ -1.5
UME1YPL139C MIG1P27705 504 aa5.67□□□□□ -1.5
UME1YPL139C PRS4P38063 326 aaPredicted RBP5.67□□□□□ -1.5
UME1YPL139C ATP3P38077 311 aaKnown RBP5.67□□□□□ -1.5
UME1YPL139C YJL163CP46996 555 aa5.67□□□□□ -1.5
UME1YPL139C GTF1P53260 183 aaPredicted RBP5.67□□□□□ -1.5
UME1YPL139C YMR181CQ03231 154 aa5.67□□□□□ -1.5
UME1YPL139C ATC1Q04005 294 aa5.67□□□□□ -1.5
UME1YPL139C YJR112W-AQ3E743 109 aa5.67□□□□□ -1.5
UME1YPL139C YHR212W-AP0CX91 67 aa5.66□□□□□ -1.5
UME1YPL139C CAP2P13517 287 aa5.66□□□□□ -1.5
UME1YPL139C ARP3P47117 449 aaKnown RBP5.66□□□□□ -1.5
UME1YPL139C NDE2Q07500 545 aa5.66□□□□□ -1.5
UME1YPL139C VPS63O13549 108 aa5.65□□□□□ -1.51
UME1YPL139C NOP1P15646 327 aaKnown RBP5.65□□□□□ -1.51
UME1YPL139C YCR016WP25617 290 aaKnown RBP5.65□□□□□ -1.51
UME1YPL139C LST8P41318 303 aa5.65□□□□□ -1.51
UME1YPL139C NIF3P53081 288 aa5.65□□□□□ -1.51
UME1YPL139C GTO3Q04806 366 aa5.65□□□□□ -1.51
UME1YPL139C RDI1Q12434 202 aa5.65□□□□□ -1.51
UME1YPL139C TPI1P00942 248 aaKnown RBP5.64□□□□□ -1.51
UME1YPL139C MLF3P32047 452 aa5.64□□□□□ -1.51
UME1YPL139C LSM1P47017 172 aaKnown RBP5.64□□□□□ -1.51
UME1YPL139C TOS8P53147 276 aa5.64□□□□□ -1.51
UME1YPL139C FSH2Q05015 223 aa5.64□□□□□ -1.51
UME1YPL139C HRD1Q08109 551 aa5.64□□□□□ -1.51
UME1YPL139C QCR2P07257 368 aa5.63□□□□□ -1.51
UME1YPL139C SPS2P08459 502 aa5.63□□□□□ -1.51
UME1YPL139C NHP6BP11633 99 aaKnown RBP5.63□□□□□ -1.51
UME1YPL139C SEC66P33754 206 aa5.63□□□□□ -1.51
UME1YPL139C YHR138CP38841 114 aaPredicted RBP5.63□□□□□ -1.51
UME1YPL139C SMX3P54999 86 aaPredicted RBP5.63□□□□□ -1.51
UME1YPL139C PRM4Q12498 284 aa5.63□□□□□ -1.51
UME1YPL139C RPD3P32561 433 aa5.62□□□□□ -1.51
UME1YPL139C MRPL38P35996 138 aaPredicted RBP5.62□□□□□ -1.51
UME1YPL139C YPT31P38555 223 aaKnown RBP5.62□□□□□ -1.51
UME1YPL139C PNC1P53184 216 aaKnown RBP5.62□□□□□ -1.51
UME1YPL139C VPS28Q02767 242 aa5.62□□□□□ -1.51
UME1YPL139C YHP1Q04116 353 aa5.62□□□□□ -1.51
UME1YPL139C YLR302CO13544 120 aa5.61□□□□□ -1.51
UME1YPL139C RTC3P38804 111 aaPredicted RBP5.61□□□□□ -1.51
UME1YPL139C YER085CP40058 173 aa5.61□□□□□ -1.51
UME1YPL139C COX15P40086 486 aa5.61□□□□□ -1.51
UME1YPL139C RFC2P40348 353 aa5.61□□□□□ -1.51
UME1YPL139C YJR012CP47087 207 aa5.61□□□□□ -1.51
UME1YPL139C TIM21P53220 239 aa5.61□□□□□ -1.51
UME1YPL139C DYN2Q02647 92 aa5.61□□□□□ -1.51
UME1YPL139C TFB5Q3E7C1 72 aaPredicted RBP5.61□□□□□ -1.51
UME1YPL139C MDM10P18409 493 aa5.6□□□□□ -1.51
UME1YPL139C PDC2P32896 925 aa5.6□□□□□ -1.51
UME1YPL139C YKL070WP36087 169 aa5.6□□□□□ -1.51
UME1YPL139C GEP4P38812 185 aa5.6□□□□□ -1.51
UME1YPL139C YAR068WP39564 161 aa5.6□□□□□ -1.51
UME1YPL139C GLO1P50107 326 aa5.6□□□□□ -1.51
UME1YPL139C YGR050CP53231 118 aa5.6□□□□□ -1.51
UME1YPL139C YGR219WP53307 113 aa5.6□□□□□ -1.51
UME1YPL139C MSO1P53604 210 aaKnown RBP5.6□□□□□ -1.51
UME1YPL139C GIM5Q04493 163 aa5.6□□□□□ -1.51
UME1YPL139C PEX10Q05568 337 aa5.6□□□□□ -1.51
UME1YPL139C USV1Q12132 391 aa5.6□□□□□ -1.51
UME1YPL139C YCT1Q12235 531 aa5.6□□□□□ -1.51
UME1YPL139C PUT1P09368 476 aa5.59□□□□□ -1.51
UME1YPL139C MRP17P28778 131 aa5.59□□□□□ -1.51
UME1YPL139C SRY1P36007 326 aa5.59□□□□□ -1.51
UME1YPL139C MRPL3P36516 390 aa5.59□□□□□ -1.51
UME1YPL139C ERV15P38312 142 aa5.59□□□□□ -1.51
UME1YPL139C YBR242WP38331 238 aa5.59□□□□□ -1.51
UME1YPL139C IMD2P38697 523 aaKnown RBP5.59□□□□□ -1.51
UME1YPL139C ARO8P53090 500 aaKnown RBP5.59□□□□□ -1.51
UME1YPL139C EST3Q03096 181 aa5.59□□□□□ -1.51
UME1YPL139C YPR013CQ12145 317 aa5.59□□□□□ -1.51
UME1YPL139C RKI1Q12189 258 aa5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms