RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C YPK9Q12697 1472 aa1.55□□□□□ -2.16
RPN8YOR261C ESP1Q03018 1630 aa1.55□□□□□ -2.16
RPN8YOR261C CNB1P25296 175 aa1.54□□□□□ -2.16
RPN8YOR261C YPL073CP40323 161 aa1.54□□□□□ -2.16
RPN8YOR261C BNA7Q04066 261 aa1.54□□□□□ -2.16
RPN8YOR261C MDM35O60200 86 aa1.53□□□□□ -2.16
RPN8YOR261C RPO31P04051 1460 aa1.53□□□□□ -2.16
RPN8YOR261C CDC36P06100 191 aaPredicted RBP1.53□□□□□ -2.16
RPN8YOR261C POL1P13382 1468 aa1.53□□□□□ -2.16
RPN8YOR261C BPT1P14772 1559 aa1.53□□□□□ -2.16
RPN8YOR261C TVP23P38962 199 aa1.53□□□□□ -2.16
RPN8YOR261C SCC2Q04002 1493 aa1.53□□□□□ -2.16
RPN8YOR261C YPR174CQ06616 221 aaPredicted RBP1.53□□□□□ -2.16
RPN8YOR261C ADF1Q2V2Q1 113 aa1.53□□□□□ -2.16
RPN8YOR261C UFD4P33202 1483 aa1.52□□□□□ -2.17
RPN8YOR261C YCR090CP25654 182 aaKnown RBP1.52□□□□□ -2.17
RPN8YOR261C YEA4P40004 342 aa1.52□□□□□ -2.17
RPN8YOR261C RPL37AP49166 88 aaKnown RBP1.52□□□□□ -2.17
RPN8YOR261C GET1P53192 235 aa1.52□□□□□ -2.17
RPN8YOR261C YCF1P39109 1515 aaKnown RBP1.51□□□□□ -2.17
RPN8YOR261C TOP2P06786 1428 aaKnown RBP1.51□□□□□ -2.17
RPN8YOR261C SMC4Q12267 1418 aa1.51□□□□□ -2.17
RPN8YOR261C HTB1P02293 131 aaKnown RBP1.51□□□□□ -2.17
RPN8YOR261C HTB2P02294 131 aa1.51□□□□□ -2.17
RPN8YOR261C PAN3P36102 679 aaPredicted RBP1.51□□□□□ -2.17
RPN8YOR261C SOK1P40317 901 aa1.51□□□□□ -2.17
RPN8YOR261C YRA1Q12159 226 aaKnown RBP1.51□□□□□ -2.17
RPN8YOR261C YCL012CQ8J0M4 134 aa1.51□□□□□ -2.17
RPN8YOR261C RKR1Q04781 1562 aa1.51□□□□□ -2.17
RPN8YOR261C STU1P38198 1513 aa1.5□□□□□ -2.17
RPN8YOR261C YOR1P53049 1477 aa1.5□□□□□ -2.17
RPN8YOR261C HYR1P40581 163 aaKnown RBP1.5□□□□□ -2.17
RPN8YOR261C MYO4P32492 1471 aa1.5□□□□□ -2.17
RPN8YOR261C CHD1P32657 1468 aa1.5□□□□□ -2.17
RPN8YOR261C SLH1P53327 1967 aaKnown RBP1.49□□□□□ -2.17
RPN8YOR261C NSP1P14907 823 aaKnown RBP1.49□□□□□ -2.17
RPN8YOR261C ASF2P32448 525 aaPredicted RBP1.49□□□□□ -2.17
RPN8YOR261C SER2P42941 309 aa1.49□□□□□ -2.17
RPN8YOR261C YFH7P43591 353 aa1.49□□□□□ -2.17
RPN8YOR261C SKI6P46948 246 aaPredicted RBP1.49□□□□□ -2.17
RPN8YOR261C CDC25P04821 1589 aa1.49□□□□□ -2.17
RPN8YOR261C MMS22Q06164 1454 aa1.49□□□□□ -2.17
RPN8YOR261C MBF1O14467 151 aaKnown RBP1.48□□□□□ -2.17
RPN8YOR261C ARP3P47117 449 aaKnown RBP1.48□□□□□ -2.17
RPN8YOR261C CGR1P53188 120 aa1.48□□□□□ -2.17
RPN8YOR261C DAD4P69851 72 aa1.48□□□□□ -2.17
RPN8YOR261C MRPS17Q03246 237 aaPredicted RBP1.48□□□□□ -2.17
RPN8YOR261C YMR252CQ04814 134 aa1.48□□□□□ -2.17
RPN8YOR261C SPP41P38904 1435 aa1.48□□□□□ -2.17
RPN8YOR261C TSC11P40061 1430 aa1.48□□□□□ -2.17
RPN8YOR261C TRM732Q03496 1420 aa1.48□□□□□ -2.17
RPN8YOR261C VTH1P40438 1549 aa1.47□□□□□ -2.17
RPN8YOR261C VTH2P40890 1549 aa1.47□□□□□ -2.17
RPN8YOR261C JIP3O13555 125 aa1.47□□□□□ -2.17
RPN8YOR261C MRS1P07266 363 aa1.47□□□□□ -2.17
RPN8YOR261C YHR212W-AP0CX91 67 aa1.47□□□□□ -2.17
RPN8YOR261C CBF1P17106 351 aa1.47□□□□□ -2.17
RPN8YOR261C ECM4P36156 370 aa1.47□□□□□ -2.17
RPN8YOR261C YHL018WP38744 120 aaPredicted RBP1.47□□□□□ -2.17
RPN8YOR261C YMR099CQ03161 297 aaKnown RBP1.47□□□□□ -2.17
RPN8YOR261C DYN3Q04949 312 aa1.47□□□□□ -2.17
RPN8YOR261C YMR226CQ05016 267 aaKnown RBP1.47□□□□□ -2.17
RPN8YOR261C RNH202Q05635 350 aa1.47□□□□□ -2.17
RPN8YOR261C IRC23Q08416 157 aa1.47□□□□□ -2.17
RPN8YOR261C GET4Q12125 312 aa1.47□□□□□ -2.17
RPN8YOR261C DNF1P32660 1571 aa1.47□□□□□ -2.17
RPN8YOR261C YAR023CD6VPM8 179 aa1.46□□□□□ -2.18
RPN8YOR261C MATALPHA2P0CY08 210 aa1.46□□□□□ -2.18
RPN8YOR261C HMLALPHA2P0CY09 210 aa1.46□□□□□ -2.18
RPN8YOR261C YER134CP40081 178 aa1.46□□□□□ -2.18
RPN8YOR261C RFC4P40339 323 aaKnown RBP1.46□□□□□ -2.18
RPN8YOR261C YMR007WQ03675 126 aa1.46□□□□□ -2.18
RPN8YOR261C FUS2Q05670 677 aa1.46□□□□□ -2.18
RPN8YOR261C TY2B-LR1P0C2J3 1770 aa1.46□□□□□ -2.18
RPN8YOR261C TY2B-FP0CX63 1770 aa1.46□□□□□ -2.18
RPN8YOR261C TY2B-GR2P0CX64 1770 aa1.46□□□□□ -2.18
RPN8YOR261C TY2B-CP25384 1770 aa1.46□□□□□ -2.18
RPN8YOR261C TY2B-DR2Q03494 1770 aa1.46□□□□□ -2.18
RPN8YOR261C TY1B-DR1Q03855 1755 aa1.46□□□□□ -2.18
RPN8YOR261C TY2B-DR3Q07791 1770 aaKnown RBP1.46□□□□□ -2.18
RPN8YOR261C TY2B-OR1Q12113 1770 aa1.46□□□□□ -2.18
RPN8YOR261C TY2B-DR1Q12472 1770 aa1.46□□□□□ -2.18
RPN8YOR261C TY2B-OR2Q12501 1770 aa1.46□□□□□ -2.18
RPN8YOR261C SNQ2P32568 1501 aaKnown RBP1.45□□□□□ -2.18
RPN8YOR261C NUP159P40477 1460 aa1.45□□□□□ -2.18
RPN8YOR261C TY2B-BQ12491 1770 aa1.45□□□□□ -2.18
RPN8YOR261C PHO85P17157 305 aa1.45□□□□□ -2.18
RPN8YOR261C APA2P22108 325 aa1.45□□□□□ -2.18
RPN8YOR261C AIM2P39721 246 aa1.45□□□□□ -2.18
RPN8YOR261C HPA3P39979 161 aa1.45□□□□□ -2.18
RPN8YOR261C UBC12P52491 188 aa1.45□□□□□ -2.18
RPN8YOR261C LTE1P07866 1435 aa1.45□□□□□ -2.18
RPN8YOR261C SNT2P53127 1403 aa1.45□□□□□ -2.18
RPN8YOR261C ESC1Q03661 1658 aaKnown RBP1.45□□□□□ -2.18
RPN8YOR261C TY1B-HO13535 1793 aa1.44□□□□□ -2.18
RPN8YOR261C TY1B-DR5P0C2I2 1755 aa1.44□□□□□ -2.18
RPN8YOR261C TY1B-DR6P0C2I3 1755 aa1.44□□□□□ -2.18
RPN8YOR261C TY1B-LR2P0C2I5 1755 aa1.44□□□□□ -2.18
RPN8YOR261C TY1B-LR3P0C2I6 1755 aaKnown RBP1.44□□□□□ -2.18
RPN8YOR261C TY1B-PR1P0C2I9 1755 aaKnown RBP1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms