RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W CCC1P47818 322 aa2.51□□□□□ -2.01
MSH2YOL090W PLP1Q04004 230 aa2.51□□□□□ -2.01
MSH2YOL090W NIP7Q08962 181 aaKnown RBP2.51□□□□□ -2.01
MSH2YOL090W YPS3Q12303 508 aa2.51□□□□□ -2.01
MSH2YOL090W IZH2Q12442 317 aa2.51□□□□□ -2.01
MSH2YOL090W PET9P18239 318 aaKnown RBP2.5□□□□□ -2.01
MSH2YOL090W MSA2P36157 363 aa2.5□□□□□ -2.01
MSH2YOL090W YMD8Q03697 442 aa2.5□□□□□ -2.01
MSH2YOL090W FRQ1Q06389 190 aa2.5□□□□□ -2.01
MSH2YOL090W RPL21BQ12672 160 aaKnown RBP2.5□□□□□ -2.01
MSH2YOL090W TDA8Q6B2U8 126 aa2.5□□□□□ -2.01
MSH2YOL090W YCL021W-AQ96VH3 125 aa2.5□□□□□ -2.01
MSH2YOL090W CPR5P35176 225 aa2.5□□□□□ -2.01
MSH2YOL090W YBL081WP38180 368 aaKnown RBP2.5□□□□□ -2.01
MSH2YOL090W YFL067WP43537 175 aa2.5□□□□□ -2.01
MSH2YOL090W YJL028WP47062 111 aa2.5□□□□□ -2.01
MSH2YOL090W BIR1P47134 954 aa2.5□□□□□ -2.01
MSH2YOL090W GAS3Q03655 524 aa2.5□□□□□ -2.01
MSH2YOL090W INP1Q03694 420 aa2.5□□□□□ -2.01
MSH2YOL090W LPP1Q04396 274 aa2.5□□□□□ -2.01
MSH2YOL090W DAS2Q12084 232 aa2.5□□□□□ -2.01
MSH2YOL090W ADH1P00330 348 aaKnown RBP2.49□□□□□ -2.01
MSH2YOL090W MAG1P22134 296 aaKnown RBP2.49□□□□□ -2.01
MSH2YOL090W RPS1BP23248 255 aaKnown RBP2.49□□□□□ -2.01
MSH2YOL090W ERG2P32352 222 aa2.49□□□□□ -2.01
MSH2YOL090W SEC17P32602 292 aa2.49□□□□□ -2.01
MSH2YOL090W OPY1P38271 328 aa2.49□□□□□ -2.01
MSH2YOL090W PHO89P38361 574 aa2.49□□□□□ -2.01
MSH2YOL090W CAB4P53332 305 aa2.49□□□□□ -2.01
MSH2YOL090W LSM3P57743 89 aaKnown RBP2.49□□□□□ -2.01
MSH2YOL090W RAV2Q03956 351 aa2.49□□□□□ -2.01
MSH2YOL090W THI74Q04083 370 aa2.49□□□□□ -2.01
MSH2YOL090W GRH1Q04410 372 aaKnown RBP2.49□□□□□ -2.01
MSH2YOL090W CKS1P20486 150 aaKnown RBP2.49□□□□□ -2.01
MSH2YOL090W YCR043CP25361 127 aa2.49□□□□□ -2.01
MSH2YOL090W TIM17P39515 158 aa2.49□□□□□ -2.01
MSH2YOL090W MNN5P46982 586 aa2.49□□□□□ -2.01
MSH2YOL090W RUB1Q03919 77 aa2.49□□□□□ -2.01
MSH2YOL090W ECM19Q06011 112 aa2.49□□□□□ -2.01
MSH2YOL090W YDL180WQ12301 547 aa2.49□□□□□ -2.01
MSH2YOL090W Q0255P03881 472 aa2.48□□□□□ -2.01
MSH2YOL090W KIN28P06242 306 aa2.48□□□□□ -2.01
MSH2YOL090W CUP1-1P0CX80 61 aa2.48□□□□□ -2.01
MSH2YOL090W CUP1-2P0CX81 61 aa2.48□□□□□ -2.01
MSH2YOL090W LHP1P33399 275 aaKnown RBP2.48□□□□□ -2.01
MSH2YOL090W UTP11P34247 250 aaPredicted RBP2.48□□□□□ -2.01
MSH2YOL090W AVT6P40074 448 aa2.48□□□□□ -2.01
MSH2YOL090W YER189WP40104 122 aa2.48□□□□□ -2.01
MSH2YOL090W YGL262WP53054 175 aa2.48□□□□□ -2.01
MSH2YOL090W MDM34P53083 459 aa2.48□□□□□ -2.01
MSH2YOL090W NDD1Q08887 554 aa2.48□□□□□ -2.01
MSH2YOL090W YPL162CQ12042 273 aa2.48□□□□□ -2.01
MSH2YOL090W JID1Q12350 301 aa2.48□□□□□ -2.01
MSH2YOL090W RPL30P14120 105 aaKnown RBP2.48□□□□□ -2.01
MSH2YOL090W RPB9P27999 122 aa2.48□□□□□ -2.01
MSH2YOL090W ZRT3P34240 503 aa2.48□□□□□ -2.01
MSH2YOL090W RFC2P40348 353 aa2.48□□□□□ -2.01
MSH2YOL090W ILM1P47155 203 aa2.48□□□□□ -2.01
MSH2YOL090W SWT21P53873 357 aaPredicted RBP2.48□□□□□ -2.01
MSH2YOL090W RPL21AQ02753 160 aaKnown RBP2.48□□□□□ -2.01
MSH2YOL090W ARL3Q02804 198 aa2.48□□□□□ -2.01
MSH2YOL090W YDR034W-BQ6Q5X2 51 aa2.48□□□□□ -2.01
MSH2YOL090W RSA4P25382 515 aaKnown RBP2.47□□□□□ -2.01
MSH2YOL090W STP22P25604 385 aa2.47□□□□□ -2.01
MSH2YOL090W YCR101CP25607 182 aa2.47□□□□□ -2.01
MSH2YOL090W RPF1P38805 295 aaKnown RBP2.47□□□□□ -2.01
MSH2YOL090W GGC1P38988 300 aa2.47□□□□□ -2.01
MSH2YOL090W GPI14P47088 403 aaKnown RBP2.47□□□□□ -2.01
MSH2YOL090W PGU1P47180 361 aa2.47□□□□□ -2.01
MSH2YOL090W MOT1P32333 1867 aa2.47□□□□□ -2.01
MSH2YOL090W YOR304C-AO14468 76 aa2.47□□□□□ -2.01
MSH2YOL090W PBI2P0CT04 75 aaKnown RBP2.47□□□□□ -2.01
MSH2YOL090W RFS1P38234 210 aaKnown RBP2.47□□□□□ -2.01
MSH2YOL090W SKI6P46948 246 aaPredicted RBP2.47□□□□□ -2.01
MSH2YOL090W TTI2P47168 421 aa2.47□□□□□ -2.01
MSH2YOL090W YGL088WP53151 121 aa2.47□□□□□ -2.01
MSH2YOL090W API2Q04413 109 aa2.47□□□□□ -2.01
MSH2YOL090W YDR115WQ04598 105 aa2.47□□□□□ -2.01
MSH2YOL090W LDB18Q07887 179 aa2.47□□□□□ -2.01
MSH2YOL090W YOR289WQ12012 251 aaPredicted RBP2.47□□□□□ -2.01
MSH2YOL090W YPL247CQ12523 523 aa2.47□□□□□ -2.01
MSH2YOL090W SLO1Q3E784 85 aa2.47□□□□□ -2.01
MSH2YOL090W TSC3Q3E790 80 aa2.47□□□□□ -2.01
MSH2YOL090W FKS1P38631 1876 aaKnown RBP2.47□□□□□ -2.01
MSH2YOL090W RIF1P29539 1916 aa2.47□□□□□ -2.01
MSH2YOL090W TKL2P33315 681 aa2.47□□□□□ -2.01
MSH2YOL090W YPL073CP40323 161 aa2.47□□□□□ -2.01
MSH2YOL090W SYS1P41544 203 aa2.47□□□□□ -2.01
MSH2YOL090W ERJ5P43613 295 aaPredicted RBP2.47□□□□□ -2.01
MSH2YOL090W YFR054CP43622 192 aa2.47□□□□□ -2.01
MSH2YOL090W FIP1P45976 327 aa2.47□□□□□ -2.01
MSH2YOL090W YGR219WP53307 113 aa2.47□□□□□ -2.01
MSH2YOL090W YDR278CQ05612 105 aa2.47□□□□□ -2.01
MSH2YOL090W HTL1Q9URQ5 78 aa2.47□□□□□ -2.01
MSH2YOL090W ECM29P38737 1868 aa2.46□□□□□ -2.02
MSH2YOL090W YLR462WO13556 202 aa2.46□□□□□ -2.02
MSH2YOL090W RPL40AP0CH08 128 aaKnown RBP2.46□□□□□ -2.02
MSH2YOL090W RPL40BP0CH09 128 aaKnown RBP2.46□□□□□ -2.02
MSH2YOL090W YEL075CP39972 122 aa2.46□□□□□ -2.02
MSH2YOL090W MEP2P41948 499 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms