RNA–Protein interactions for RNA: YOL072W

THP1, Transcript of Nuclear pore-associated protein, yeast

Gene THP1, Length 1,368 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
THP1	YOL072W	YGP1	P38616	354 aa	Known RBP	4.22	□□□□□ -1.73
THP1	YOL072W	CAF16	P43569	289 aa		4.22	□□□□□ -1.73
THP1	YOL072W	LPP1	Q04396	274 aa		4.22	□□□□□ -1.73
THP1	YOL072W	ECM18	Q04623	453 aa		4.22	□□□□□ -1.73
THP1	YOL072W	HRD1	Q08109	551 aa		4.22	□□□□□ -1.73
THP1	YOL072W	YPL264C	Q08980	353 aa		4.22	□□□□□ -1.73
THP1	YOL072W	YOR029W	Q12243	111 aa		4.22	□□□□□ -1.73
THP1	YOL072W	YHR213W-A	Q8TGT4	77 aa		4.22	□□□□□ -1.73
THP1	YOL072W	ROX3	P25046	220 aa		4.21	□□□□□ -1.74
THP1	YOL072W	CNB1	P25296	175 aa		4.21	□□□□□ -1.74
THP1	YOL072W	ELO2	P25358	347 aa		4.21	□□□□□ -1.74
THP1	YOL072W	RIB5	P38145	238 aa		4.21	□□□□□ -1.74
THP1	YOL072W	YHR138C	P38841	114 aa	Predicted RBP	4.21	□□□□□ -1.74
THP1	YOL072W	FLO5	P38894	1075 aa		4.21	□□□□□ -1.74
THP1	YOL072W	QRI1	P43123	477 aa	Known RBP	4.21	□□□□□ -1.74
THP1	YOL072W	TTI2	P47168	421 aa		4.21	□□□□□ -1.74
THP1	YOL072W	YNR066C	P53752	436 aa		4.21	□□□□□ -1.74
THP1	YOL072W	PDR17	P53844	350 aa		4.21	□□□□□ -1.74
THP1	YOL072W	LRS4	Q04087	347 aa	Known RBP	4.21	□□□□□ -1.74
THP1	YOL072W	FSH2	Q05015	223 aa		4.21	□□□□□ -1.74
THP1	YOL072W	YDL242W	Q07746	117 aa		4.21	□□□□□ -1.74
THP1	YOL072W	COX19	Q3E731	98 aa		4.21	□□□□□ -1.74
THP1	YOL072W	PCC1	Q3E833	88 aa		4.21	□□□□□ -1.74
THP1	YOL072W	YOS1	Q3E834	85 aa		4.21	□□□□□ -1.74
THP1	YOL072W	YMR105W-A	Q8TGS8	64 aa		4.21	□□□□□ -1.74
THP1	YOL072W	Q0142	Q9ZZW4	58 aa		4.21	□□□□□ -1.74
THP1	YOL072W	BPH1	P25356	2167 aa		4.2	□□□□□ -1.74
THP1	YOL072W	SPO13	P23624	291 aa		4.2	□□□□□ -1.74
THP1	YOL072W	YCR025C	P25352	136 aa		4.2	□□□□□ -1.74
THP1	YOL072W	YKL187C	P34231	750 aa		4.2	□□□□□ -1.74
THP1	YOL072W	CPR5	P35176	225 aa		4.2	□□□□□ -1.74
THP1	YOL072W	SHG1	P38337	142 aa		4.2	□□□□□ -1.74
THP1	YOL072W	SPC25	P40014	221 aa		4.2	□□□□□ -1.74
THP1	YOL072W	ARP3	P47117	449 aa	Known RBP	4.2	□□□□□ -1.74
THP1	YOL072W	PEF1	P53238	335 aa		4.2	□□□□□ -1.74
THP1	YOL072W	SNO1	Q03144	224 aa		4.2	□□□□□ -1.74
THP1	YOL072W	TMA23	Q03525	211 aa		4.2	□□□□□ -1.74
THP1	YOL072W	RPL9A	P05738	191 aa	Known RBP	4.19	□□□□□ -1.74
THP1	YOL072W	FCY2	P17064	533 aa		4.19	□□□□□ -1.74
THP1	YOL072W	ATP10	P18496	279 aa		4.19	□□□□□ -1.74
THP1	YOL072W	YMR31	P19955	123 aa		4.19	□□□□□ -1.74
THP1	YOL072W	MTR2	P34232	184 aa	Known RBP	4.19	□□□□□ -1.74
THP1	YOL072W	YBR292C	P38357	123 aa		4.19	□□□□□ -1.74
THP1	YOL072W	YIL024C	P40543	189 aa		4.19	□□□□□ -1.74
THP1	YOL072W	YFL015C	P43578	164 aa		4.19	□□□□□ -1.74
THP1	YOL072W	ERG25	P53045	309 aa		4.19	□□□□□ -1.74
THP1	YOL072W	YGR050C	P53231	118 aa		4.19	□□□□□ -1.74
THP1	YOL072W	TEX1	P53851	422 aa	Known RBP	4.19	□□□□□ -1.74
THP1	YOL072W	YNL046W	P53956	172 aa		4.19	□□□□□ -1.74
THP1	YOL072W	DCS1	Q06151	350 aa		4.19	□□□□□ -1.74
THP1	YOL072W	YPD1	Q07688	167 aa		4.19	□□□□□ -1.74
THP1	YOL072W	SDO1	Q07953	250 aa	Known RBP	4.19	□□□□□ -1.74
THP1	YOL072W	USV1	Q12132	391 aa		4.19	□□□□□ -1.74
THP1	YOL072W	PRR2	Q12310	699 aa		4.19	□□□□□ -1.74
THP1	YOL072W	YCL048W-A	Q2V2Q2	79 aa		4.19	□□□□□ -1.74
THP1	YOL072W	BOL1	Q3E793	110 aa		4.19	□□□□□ -1.74
THP1	YOL072W	CDC50	P25656	391 aa		4.18	□□□□□ -1.74
THP1	YOL072W	SIP1	P32578	815 aa		4.18	□□□□□ -1.74
THP1	YOL072W	COX15	P40086	486 aa		4.18	□□□□□ -1.74
THP1	YOL072W	GAT2	P40209	560 aa		4.18	□□□□□ -1.74
THP1	YOL072W	DFG10	P40526	253 aa		4.18	□□□□□ -1.74
THP1	YOL072W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
THP1	YOL072W	RPL9B	P51401	191 aa	Known RBP	4.18	□□□□□ -1.74
THP1	YOL072W	CRH1	P53301	507 aa		4.18	□□□□□ -1.74
THP1	YOL072W	YNL092W	P53934	400 aa		4.18	□□□□□ -1.74
THP1	YOL072W	YDL009C	Q12210	107 aa		4.18	□□□□□ -1.74
THP1	YOL072W	VPS63	O13549	108 aa		4.17	□□□□□ -1.74
THP1	YOL072W	RPS25B	P0C0T4	108 aa	Known RBP	4.17	□□□□□ -1.74
THP1	YOL072W	YGR269W	P40326	108 aa		4.17	□□□□□ -1.74
THP1	YOL072W	RTS2	P40962	232 aa		4.17	□□□□□ -1.74
THP1	YOL072W	HAM1	P47119	197 aa	Known RBP	4.17	□□□□□ -1.74
THP1	YOL072W	YNR064C	P53750	290 aa		4.17	□□□□□ -1.74
THP1	YOL072W	HCH1	P53834	153 aa		4.17	□□□□□ -1.74
THP1	YOL072W	TIM10	P87108	93 aa		4.17	□□□□□ -1.74
THP1	YOL072W	DYN2	Q02647	92 aa		4.17	□□□□□ -1.74
THP1	YOL072W	YMR253C	Q04835	414 aa		4.17	□□□□□ -1.74
THP1	YOL072W	YLR179C	Q06252	201 aa	Known RBP	4.17	□□□□□ -1.74
THP1	YOL072W	ARR3	Q06598	404 aa		4.17	□□□□□ -1.74
THP1	YOL072W	SNA4	Q07549	140 aa		4.17	□□□□□ -1.74
THP1	YOL072W	TMC1	Q08422	150 aa	Predicted RBP	4.17	□□□□□ -1.74
THP1	YOL072W	POC4	Q12245	148 aa	Predicted RBP	4.17	□□□□□ -1.74
THP1	YOL072W	SME1	Q12330	94 aa	Predicted RBP	4.17	□□□□□ -1.74
THP1	YOL072W	RPS25A	Q3E792	108 aa	Predicted RBP	4.17	□□□□□ -1.74
THP1	YOL072W	TDH1	P00360	332 aa	Known RBP	4.16	□□□□□ -1.74
THP1	YOL072W	AHT1	P29589	182 aa		4.16	□□□□□ -1.74
THP1	YOL072W	SOR1	P35497	357 aa	Known RBP	4.16	□□□□□ -1.74
THP1	YOL072W	MIA40	P36046	403 aa		4.16	□□□□□ -1.74
THP1	YOL072W	RPL14A	P36105	138 aa	Known RBP	4.16	□□□□□ -1.74
THP1	YOL072W	RPL14B	P38754	138 aa	Known RBP	4.16	□□□□□ -1.74
THP1	YOL072W	RTC3	P38804	111 aa	Predicted RBP	4.16	□□□□□ -1.74
THP1	YOL072W	WSS1	P38838	269 aa		4.16	□□□□□ -1.74
THP1	YOL072W	POG1	P40473	351 aa		4.16	□□□□□ -1.74
THP1	YOL072W	SMM1	P53720	384 aa	Known RBP	4.16	□□□□□ -1.74
THP1	YOL072W	CAF40	P53829	373 aa		4.16	□□□□□ -1.74
THP1	YOL072W	SOR2	Q07786	357 aa		4.16	□□□□□ -1.74
THP1	YOL072W	IRC25	Q07951	179 aa		4.16	□□□□□ -1.74
THP1	YOL072W	YGL258W-A	Q3E740	77 aa		4.16	□□□□□ -1.74
THP1	YOL072W	URA2	P07259	2214 aa	Known RBP	4.16	□□□□□ -1.74
THP1	YOL072W	YDR157W	A0A023PZE8	133 aa		4.15	□□□□□ -1.74
THP1	YOL072W	MRS3	P10566	314 aa		4.15	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms