RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C ERV15P38312 142 aa1.25□□□□□ -2.21
RPB11YOL005C RPF1P38805 295 aaKnown RBP1.25□□□□□ -2.21
RPB11YOL005C AYR1P40471 297 aa1.25□□□□□ -2.21
RPB11YOL005C FMP32P43557 207 aa1.25□□□□□ -2.21
RPB11YOL005C YJR056CP47115 236 aa1.25□□□□□ -2.21
RPB11YOL005C AIF1P52923 378 aa1.25□□□□□ -2.21
RPB11YOL005C NEJ1Q06148 342 aa1.25□□□□□ -2.21
RPB11YOL005C HEM25Q07534 307 aa1.25□□□□□ -2.21
RPB11YOL005C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.25□□□□□ -2.21not detected
RPB11YOL005C TPO4Q12256 659 aa1.25□□□□□ -2.21
RPB11YOL005C GTT2Q12390 233 aa1.25□□□□□ -2.21
RPB11YOL005C YPL229WQ99395 206 aa1.25□□□□□ -2.21
RPB11YOL005C HFA1P32874 2273 aa1.24□□□□□ -2.21
RPB11YOL005C BRR2P32639 2163 aaKnown RBP1.24□□□□□ -2.21
RPB11YOL005C RPL43AP0CX25 92 aaKnown RBP1.24□□□□□ -2.21
RPB11YOL005C RPL43BP0CX26 92 aa1.24□□□□□ -2.21
RPB11YOL005C RPB4P20433 221 aaPredicted RBP1.24□□□□□ -2.21
RPB11YOL005C TAF14P35189 244 aa1.24□□□□□ -2.21
RPB11YOL005C RPS27AP35997 82 aaKnown RBP1.24□□□□□ -2.21
RPB11YOL005C ECM33P38248 429 aaKnown RBP1.24□□□□□ -2.21
RPB11YOL005C RPS27BP38711 82 aa1.24□□□□□ -2.21
RPB11YOL005C YHR022CP38763 256 aa1.24□□□□□ -2.21
RPB11YOL005C YHR180WP38868 163 aa1.24□□□□□ -2.21
RPB11YOL005C COX15P40086 486 aa1.24□□□□□ -2.21
RPB11YOL005C PEP8P40335 379 aa1.24□□□□□ -2.21
RPB11YOL005C BMT5P40493 336 aa1.24□□□□□ -2.21
RPB11YOL005C YIL086CP40503 102 aa1.24□□□□□ -2.21
RPB11YOL005C RPA43P46669 326 aa1.24□□□□□ -2.21
RPB11YOL005C YJR149WP47177 404 aa1.24□□□□□ -2.21
RPB11YOL005C EFM5P53200 248 aaKnown RBP1.24□□□□□ -2.21
RPB11YOL005C ABF2Q02486 183 aa1.24□□□□□ -2.21
RPB11YOL005C YLR053CQ12026 108 aa1.24□□□□□ -2.21
RPB11YOL005C PRP8P33334 2413 aaKnown RBP1.24□□□□□ -2.21
RPB11YOL005C UBR1P19812 1950 aa1.23□□□□□ -2.21
RPB11YOL005C YHR139C-AO13536 103 aa1.23□□□□□ -2.21
RPB11YOL005C CDC8P00572 216 aa1.23□□□□□ -2.21
RPB11YOL005C RHO1P06780 209 aaKnown RBP1.23□□□□□ -2.21
RPB11YOL005C GPA2P10823 449 aa1.23□□□□□ -2.21
RPB11YOL005C YCL042WP25572 119 aa1.23□□□□□ -2.21
RPB11YOL005C TAH1P25638 111 aaPredicted RBP1.23□□□□□ -2.21
RPB11YOL005C PTC1P35182 281 aa1.23□□□□□ -2.21
RPB11YOL005C VPS21P36017 210 aaKnown RBP1.23□□□□□ -2.21
RPB11YOL005C MRPL15P36523 253 aa1.23□□□□□ -2.21
RPB11YOL005C MIC12P38341 106 aa1.23□□□□□ -2.21
RPB11YOL005C DOG1P38774 246 aa1.23□□□□□ -2.21
RPB11YOL005C AIM2P39721 246 aa1.23□□□□□ -2.21
RPB11YOL005C YER085CP40058 173 aa1.23□□□□□ -2.21
RPB11YOL005C PEX17P40155 199 aa1.23□□□□□ -2.21
RPB11YOL005C APQ12P40532 138 aa1.23□□□□□ -2.21
RPB11YOL005C CUP9P41817 306 aa1.23□□□□□ -2.21
RPB11YOL005C MCM22P47167 239 aa1.23□□□□□ -2.21
RPB11YOL005C YNL140CP53910 189 aa1.23□□□□□ -2.21
RPB11YOL005C LSM3P57743 89 aaKnown RBP1.23□□□□□ -2.21
RPB11YOL005C NHP10Q03435 203 aa1.23□□□□□ -2.21
RPB11YOL005C ARR2Q06597 130 aa1.23□□□□□ -2.21
RPB11YOL005C MDM32Q12171 622 aa1.23□□□□□ -2.21
RPB11YOL005C MDN1Q12019 4910 aaKnown RBP1.23□□□□□ -2.21
RPB11YOL005C MDM35O60200 86 aa1.22□□□□□ -2.21
RPB11YOL005C YSF3P0C074 85 aaPredicted RBP1.22□□□□□ -2.21
RPB11YOL005C GRX2P17695 143 aaKnown RBP1.22□□□□□ -2.21
RPB11YOL005C YCR090CP25654 182 aaKnown RBP1.22□□□□□ -2.21
RPB11YOL005C ADE1P27616 306 aa1.22□□□□□ -2.21
RPB11YOL005C RPC19P28000 142 aaKnown RBP1.22□□□□□ -2.21
RPB11YOL005C PPA2P28239 310 aa1.22□□□□□ -2.21
RPB11YOL005C HSP150P32478 413 aa1.22□□□□□ -2.21
RPB11YOL005C SSO1P32867 290 aa1.22□□□□□ -2.21
RPB11YOL005C SUI1P32911 108 aaKnown RBP1.22□□□□□ -2.21
RPB11YOL005C NTF2P33331 125 aaKnown RBP1.22□□□□□ -2.21
RPB11YOL005C AST2P39945 430 aaKnown RBP1.22□□□□□ -2.21
RPB11YOL005C SMX2P40204 77 aaKnown RBP1.22□□□□□ -2.21
RPB11YOL005C YKE4P40544 346 aa1.22□□□□□ -2.21
RPB11YOL005C TOS8P53147 276 aa1.22□□□□□ -2.21
RPB11YOL005C MIX14Q04341 121 aa1.22□□□□□ -2.21
RPB11YOL005C YPR174CQ06616 221 aaPredicted RBP1.22□□□□□ -2.21
RPB11YOL005C YRA1Q12159 226 aaKnown RBP1.22□□□□□ -2.21
RPB11YOL005C GCN1P33892 2672 aaKnown RBP1.21□□□□□ -2.22
RPB11YOL005C THP2O13539 261 aaKnown RBP1.21□□□□□ -2.22
RPB11YOL005C RPL28P02406 149 aaKnown RBP1.21□□□□□ -2.22
RPB11YOL005C NMT1P14743 455 aa1.21□□□□□ -2.22
RPB11YOL005C URA6P15700 204 aa1.21□□□□□ -2.22
RPB11YOL005C RPO26P20435 155 aa1.21□□□□□ -2.22
RPB11YOL005C RPL24BP24000 155 aaKnown RBP1.21□□□□□ -2.22
RPB11YOL005C ATG22P25568 528 aa1.21□□□□□ -2.22
RPB11YOL005C VMA6P32366 345 aaKnown RBP1.21□□□□□ -2.22
RPB11YOL005C SEC17P32602 292 aa1.21□□□□□ -2.22
RPB11YOL005C VPS51P36116 164 aa1.21□□□□□ -2.22
RPB11YOL005C FES1P38260 290 aa1.21□□□□□ -2.22
RPB11YOL005C DOG2P38773 246 aa1.21□□□□□ -2.22
RPB11YOL005C DSE2P38844 325 aa1.21□□□□□ -2.22
RPB11YOL005C YER034WP40022 185 aaKnown RBP1.21□□□□□ -2.22
RPB11YOL005C RPL33BP41056 107 aaKnown RBP1.21□□□□□ -2.22
RPB11YOL005C RAD17P48581 401 aa1.21□□□□□ -2.22
RPB11YOL005C ALG13P53178 202 aa1.21□□□□□ -2.22
RPB11YOL005C MPA43P53583 542 aaPredicted RBP1.21□□□□□ -2.22
RPB11YOL005C FYV6P53913 173 aa1.21□□□□□ -2.22
RPB11YOL005C YNL010WP53981 241 aaKnown RBP1.21□□□□□ -2.22
RPB11YOL005C YLR283WQ05867 314 aa1.21□□□□□ -2.22
RPB11YOL005C YLR036CQ07986 203 aa1.21□□□□□ -2.22
RPB11YOL005C YOL024WQ08172 172 aa1.21□□□□□ -2.22
RPB11YOL005C RIO1Q12196 484 aaKnown RBP1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 61.7 ms