RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W NAG1Q8TGN9 163 aa2.51□□□□□ -2.01
UBP8YMR223W YFR032C-BQ8TGU2 87 aa2.51□□□□□ -2.01
UBP8YMR223W TCB3Q03640 1545 aaKnown RBP2.51□□□□□ -2.01
UBP8YMR223W TRM732Q03496 1420 aa2.51□□□□□ -2.01
UBP8YMR223W IMP1P28627 190 aa2.51□□□□□ -2.01
UBP8YMR223W SPT14P32363 452 aa2.51□□□□□ -2.01
UBP8YMR223W YKR070WP36151 352 aaKnown RBP2.51□□□□□ -2.01
UBP8YMR223W YIL012WP40551 113 aa2.51□□□□□ -2.01
UBP8YMR223W GLR1P41921 483 aaKnown RBP2.51□□□□□ -2.01
UBP8YMR223W PFS2P42841 465 aaKnown RBP2.51□□□□□ -2.01
UBP8YMR223W SER2P42941 309 aa2.51□□□□□ -2.01
UBP8YMR223W YFR054CP43622 192 aa2.51□□□□□ -2.01
UBP8YMR223W YNL010WP53981 241 aaKnown RBP2.51□□□□□ -2.01
UBP8YMR223W APS2Q00381 147 aa2.51□□□□□ -2.01
UBP8YMR223W TMA23Q03525 211 aa2.51□□□□□ -2.01
UBP8YMR223W INP1Q03694 420 aa2.51□□□□□ -2.01
UBP8YMR223W FSH2Q05015 223 aa2.51□□□□□ -2.01
UBP8YMR223W YOR214CQ12282 236 aa2.51□□□□□ -2.01
UBP8YMR223W ATP14Q12349 124 aa2.51□□□□□ -2.01
UBP8YMR223W YAL063C-AQ3E791 96 aa2.51□□□□□ -2.01
UBP8YMR223W YER039C-AP0CD97 72 aa2.5□□□□□ -2.01
UBP8YMR223W PHO85P17157 305 aa2.5□□□□□ -2.01
UBP8YMR223W LDS1P31379 325 aa2.5□□□□□ -2.01
UBP8YMR223W SNC2P33328 115 aa2.5□□□□□ -2.01
UBP8YMR223W UTP30P36144 274 aaKnown RBP2.5□□□□□ -2.01
UBP8YMR223W YBR063CP38083 404 aa2.5□□□□□ -2.01
UBP8YMR223W MED6P38782 295 aa2.5□□□□□ -2.01
UBP8YMR223W SFT1P43682 97 aa2.5□□□□□ -2.01
UBP8YMR223W YGR017WP53210 297 aa2.5□□□□□ -2.01
UBP8YMR223W YKR005CQ02203 525 aa2.5□□□□□ -2.01
UBP8YMR223W DIG2Q03373 323 aaKnown RBP2.5□□□□□ -2.01
UBP8YMR223W CGI121Q03705 181 aaKnown RBP2.5□□□□□ -2.01
UBP8YMR223W YDL180WQ12301 547 aa2.5□□□□□ -2.01
UBP8YMR223W YLR118CQ12354 227 aa2.5□□□□□ -2.01
UBP8YMR223W TSC3Q3E790 80 aa2.5□□□□□ -2.01
UBP8YMR223W SPA2P23201 1466 aaKnown RBP2.49□□□□□ -2.01
UBP8YMR223W FMP49A0A023PZB3 126 aa2.49□□□□□ -2.01
UBP8YMR223W ETR1P38071 380 aa2.49□□□□□ -2.01
UBP8YMR223W YHL026CP38740 315 aa2.49□□□□□ -2.01
UBP8YMR223W YHR140WP38842 239 aa2.49□□□□□ -2.01
UBP8YMR223W DLS1P40366 167 aa2.49□□□□□ -2.01
UBP8YMR223W RPS12P48589 143 aaKnown RBP2.49□□□□□ -2.01
UBP8YMR223W TIM13P53299 105 aa2.49□□□□□ -2.01
UBP8YMR223W HHO1P53551 258 aa2.49□□□□□ -2.01
UBP8YMR223W SWT21P53873 357 aaPredicted RBP2.49□□□□□ -2.01
UBP8YMR223W EMI1Q04406 187 aa2.49□□□□□ -2.01
UBP8YMR223W YPR114WQ06107 315 aa2.49□□□□□ -2.01
UBP8YMR223W YPL162CQ12042 273 aa2.49□□□□□ -2.01
UBP8YMR223W FCY1Q12178 158 aa2.49□□□□□ -2.01
UBP8YMR223W TIR1P10863 254 aa2.48□□□□□ -2.01
UBP8YMR223W MAG1P22134 296 aaKnown RBP2.48□□□□□ -2.01
UBP8YMR223W TKL2P33315 681 aa2.48□□□□□ -2.01
UBP8YMR223W MSA2P36157 363 aa2.48□□□□□ -2.01
UBP8YMR223W COS8P38723 381 aa2.48□□□□□ -2.01
UBP8YMR223W IRC22P40006 225 aa2.48□□□□□ -2.01
UBP8YMR223W TTI2P47168 421 aa2.48□□□□□ -2.01
UBP8YMR223W YGR039WP53225 103 aa2.48□□□□□ -2.01
UBP8YMR223W ALG9P53868 555 aaKnown RBP2.48□□□□□ -2.01
UBP8YMR223W YDR366CP87287 132 aa2.48□□□□□ -2.01
UBP8YMR223W LPP1Q04396 274 aa2.48□□□□□ -2.01
UBP8YMR223W ZEO1Q08245 113 aa2.48□□□□□ -2.01
UBP8YMR223W SPC3Q12133 184 aa2.48□□□□□ -2.01
UBP8YMR223W TIM22Q12328 207 aa2.48□□□□□ -2.01
UBP8YMR223W DGK1Q12382 290 aa2.48□□□□□ -2.01
UBP8YMR223W BGL2P15703 313 aaKnown RBP2.47□□□□□ -2.01
UBP8YMR223W SEC17P32602 292 aa2.47□□□□□ -2.01
UBP8YMR223W ZRT3P34240 503 aa2.47□□□□□ -2.01
UBP8YMR223W YOR062CP36025 268 aa2.47□□□□□ -2.01
UBP8YMR223W MOB1P40484 314 aa2.47□□□□□ -2.01
UBP8YMR223W YJL218WP40892 196 aaKnown RBP2.47□□□□□ -2.01
UBP8YMR223W PGU1P47180 361 aa2.47□□□□□ -2.01
UBP8YMR223W YGL088WP53151 121 aa2.47□□□□□ -2.01
UBP8YMR223W YGR015CP53208 328 aa2.47□□□□□ -2.01
UBP8YMR223W YPL039WQ03080 316 aa2.47□□□□□ -2.01
UBP8YMR223W GRH1Q04410 372 aaKnown RBP2.47□□□□□ -2.01
UBP8YMR223W PIN3Q06449 215 aa2.47□□□□□ -2.01
UBP8YMR223W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
UBP8YMR223W NIP7Q08962 181 aaKnown RBP2.47□□□□□ -2.01
UBP8YMR223W YNL277W-AQ3E7Z0 62 aa2.47□□□□□ -2.01
UBP8YMR223W YPR014CQ6B0W2 109 aa2.47□□□□□ -2.01
UBP8YMR223W HSL1P34244 1518 aa2.47□□□□□ -2.01
UBP8YMR223W TSC11P40061 1430 aa2.47□□□□□ -2.01
UBP8YMR223W VAR1P02381 398 aa2.46□□□□□ -2.02
UBP8YMR223W HAP2P06774 265 aa2.46□□□□□ -2.02
UBP8YMR223W PTC1P35182 281 aa2.46□□□□□ -2.02
UBP8YMR223W YRA2P36036 203 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
UBP8YMR223W YFL012WP43580 148 aa2.46□□□□□ -2.02
UBP8YMR223W YGL262WP53054 175 aa2.46□□□□□ -2.02
UBP8YMR223W YOL014WQ08110 124 aa2.46□□□□□ -2.02
UBP8YMR223W YDL211CQ12121 372 aa2.46□□□□□ -2.02
UBP8YMR223W ATO3Q12359 275 aa2.46□□□□□ -2.02
UBP8YMR223W BOL1Q3E793 110 aa2.46□□□□□ -2.02
UBP8YMR223W YPR170W-BP0C5R9 85 aa2.45□□□□□ -2.02
UBP8YMR223W RPC19P28000 142 aaKnown RBP2.45□□□□□ -2.02
UBP8YMR223W SRP21P32342 167 aa2.45□□□□□ -2.02
UBP8YMR223W ERG2P32352 222 aa2.45□□□□□ -2.02
UBP8YMR223W SHE1P38200 338 aa2.45□□□□□ -2.02
UBP8YMR223W PHO89P38361 574 aa2.45□□□□□ -2.02
UBP8YMR223W AIM18P38884 321 aa2.45□□□□□ -2.02
UBP8YMR223W YER181CP40097 107 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms