RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C DDI3P0CH64 225 aa3.8□□□□□ -1.8
ATG17YLR423C AHC2P25649 128 aa3.8□□□□□ -1.8
ATG17YLR423C YKR041WP36134 250 aa3.8□□□□□ -1.8
ATG17YLR423C FCY21P40039 528 aa3.8□□□□□ -1.8
ATG17YLR423C LSM4P40070 187 aaKnown RBP3.8□□□□□ -1.8
ATG17YLR423C DYN3Q04949 312 aa3.8□□□□□ -1.8
ATG17YLR423C PEX11Q12462 236 aa3.8□□□□□ -1.8
ATG17YLR423C BOL1Q3E793 110 aa3.8□□□□□ -1.8
ATG17YLR423C PDR18P53756 1333 aa3.79□□□□□ -1.8
ATG17YLR423C FZF1P32805 299 aa3.79□□□□□ -1.8
ATG17YLR423C KDX1P36005 433 aa3.79□□□□□ -1.8
ATG17YLR423C NVJ1P38881 321 aa3.79□□□□□ -1.8
ATG17YLR423C YMR315WQ04869 349 aaKnown RBP3.79□□□□□ -1.8
ATG17YLR423C ATG40Q99325 256 aa3.79□□□□□ -1.8
ATG17YLR423C RAD51P25454 400 aa3.78□□□□□ -1.8
ATG17YLR423C SAY1P53324 424 aa3.78□□□□□ -1.8
ATG17YLR423C YNL247WP53852 767 aaKnown RBP3.78□□□□□ -1.8
ATG17YLR423C PGA1P53896 198 aa3.78□□□□□ -1.8
ATG17YLR423C TCB3Q03640 1545 aaKnown RBP3.77□□□□□ -1.81
ATG17YLR423C POR1P04840 283 aaKnown RBP3.77□□□□□ -1.81
ATG17YLR423C MDH2P22133 377 aa3.77□□□□□ -1.81
ATG17YLR423C SHE2P36068 246 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
ATG17YLR423C PEP8P40335 379 aa3.77□□□□□ -1.81
ATG17YLR423C TDA4P47153 279 aa3.77□□□□□ -1.81
ATG17YLR423C YMR099CQ03161 297 aaKnown RBP3.77□□□□□ -1.81
ATG17YLR423C YOR342CQ12182 319 aa3.77□□□□□ -1.81
ATG17YLR423C CLG1P35190 452 aa3.76□□□□□ -1.81
ATG17YLR423C MAK5P38112 773 aaPredicted RBP3.76□□□□□ -1.81
ATG17YLR423C YBR209WP38311 105 aa3.76□□□□□ -1.81
ATG17YLR423C TVP23P38962 199 aa3.76□□□□□ -1.81
ATG17YLR423C MTW1P39731 289 aa3.76□□□□□ -1.81
ATG17YLR423C JAC1P53193 184 aa3.76□□□□□ -1.81
ATG17YLR423C IGO1P53897 168 aa3.76□□□□□ -1.81
ATG17YLR423C YNL140CP53910 189 aa3.76□□□□□ -1.81
ATG17YLR423C SML1Q04964 104 aa3.76□□□□□ -1.81
ATG17YLR423C MPD1Q12404 318 aaKnown RBP3.76□□□□□ -1.81
ATG17YLR423C YAR023CD6VPM8 179 aa3.75□□□□□ -1.81
ATG17YLR423C YMR295CQ03559 197 aa3.75□□□□□ -1.81
ATG17YLR423C HPT1Q04178 221 aaKnown RBP3.75□□□□□ -1.81
ATG17YLR423C YLR050CQ12155 161 aaKnown RBP3.75□□□□□ -1.81
ATG17YLR423C AYR1P40471 297 aa3.74□□□□□ -1.81
ATG17YLR423C BUD25P85052 153 aa3.74□□□□□ -1.81
ATG17YLR423C PLP1Q04004 230 aa3.74□□□□□ -1.81
ATG17YLR423C YKL102CP34249 101 aa3.73□□□□□ -1.81
ATG17YLR423C FMP23P38231 175 aa3.73□□□□□ -1.81
ATG17YLR423C GAA1P39012 614 aa3.73□□□□□ -1.81
ATG17YLR423C GPI17Q04080 534 aa3.73□□□□□ -1.81
ATG17YLR423C YLR236CA0A023PZG4 107 aa3.72□□□□□ -1.81
ATG17YLR423C ARO7P32178 256 aa3.72□□□□□ -1.81
ATG17YLR423C NSG1P38837 291 aa3.72□□□□□ -1.81
ATG17YLR423C GPI14P47088 403 aaKnown RBP3.72□□□□□ -1.81
ATG17YLR423C CUE4Q04201 117 aaPredicted RBP3.72□□□□□ -1.81
ATG17YLR423C REV3P14284 1504 aa3.71□□□□□ -1.82
ATG17YLR423C QCR2P07257 368 aa3.71□□□□□ -1.82
ATG17YLR423C NSP1P14907 823 aaKnown RBP3.71□□□□□ -1.82
ATG17YLR423C TFC1P32367 649 aa3.71□□□□□ -1.82
ATG17YLR423C YER121WP40076 114 aa3.71□□□□□ -1.82
ATG17YLR423C MPC3P53311 146 aa3.71□□□□□ -1.82
ATG17YLR423C ARC19P33204 171 aaKnown RBP3.7□□□□□ -1.82
ATG17YLR423C TVP38P36164 337 aa3.7□□□□□ -1.82
ATG17YLR423C VPS71Q03433 280 aa3.7□□□□□ -1.82
ATG17YLR423C MDS3P53094 1487 aa3.69□□□□□ -1.82
ATG17YLR423C CMD1P06787 147 aaKnown RBP3.69□□□□□ -1.82
ATG17YLR423C SPO13P23624 291 aa3.69□□□□□ -1.82
ATG17YLR423C YFL019CP43576 117 aa3.69□□□□□ -1.82
ATG17YLR423C ERJ5P43613 295 aaPredicted RBP3.69□□□□□ -1.82
ATG17YLR423C FLO9P39712 1322 aa3.69□□□□□ -1.82
ATG17YLR423C THO2P53552 1597 aaKnown RBP3.68□□□□□ -1.82
ATG17YLR423C QCR6P00127 147 aa3.68□□□□□ -1.82
ATG17YLR423C CUP9P41817 306 aa3.68□□□□□ -1.82
ATG17YLR423C SHH3Q04487 196 aa3.68□□□□□ -1.82
ATG17YLR423C NAT3Q06504 195 aa3.68□□□□□ -1.82
ATG17YLR423C RAD28Q12021 506 aa3.68□□□□□ -1.82
ATG17YLR423C YLR412C-AQ3E742 68 aa3.68□□□□□ -1.82
ATG17YLR423C ECM5Q03214 1411 aa3.68□□□□□ -1.82
ATG17YLR423C HSL1P34244 1518 aa3.67□□□□□ -1.82
ATG17YLR423C FES1P38260 290 aa3.67□□□□□ -1.82
ATG17YLR423C RFC2P40348 353 aa3.67□□□□□ -1.82
ATG17YLR423C KNH1P50112 268 aa3.66□□□□□ -1.82
ATG17YLR423C SMD2Q06217 110 aaKnown RBP3.66□□□□□ -1.82
ATG17YLR423C ANT1Q06497 328 aa3.66□□□□□ -1.82
ATG17YLR423C DGK1Q12382 290 aa3.66□□□□□ -1.82
ATG17YLR423C BPT1P14772 1559 aa3.65□□□□□ -1.82
ATG17YLR423C AME1P38313 324 aa3.64□□□□□ -1.83
ATG17YLR423C SPT6P23615 1451 aaKnown RBP3.64□□□□□ -1.83
ATG17YLR423C TIR1P10863 254 aa3.63□□□□□ -1.83
ATG17YLR423C YFR054CP43622 192 aa3.63□□□□□ -1.83
ATG17YLR423C SBH1P52870 82 aa3.63□□□□□ -1.83
ATG17YLR423C POP3P53833 195 aaPredicted RBP3.63□□□□□ -1.83
ATG17YLR423C YMR253CQ04835 414 aa3.63□□□□□ -1.83
ATG17YLR423C IRC23Q08416 157 aa3.63□□□□□ -1.83
ATG17YLR423C HIR3P47171 1648 aa3.62□□□□□ -1.83
ATG17YLR423C SEC11P15367 167 aa3.62□□□□□ -1.83
ATG17YLR423C TMA19P35691 167 aaKnown RBP3.62□□□□□ -1.83
ATG17YLR423C PAM17P36147 197 aa3.62□□□□□ -1.83
ATG17YLR423C YBR219CP38317 127 aa3.62□□□□□ -1.83
ATG17YLR423C DIG2Q03373 323 aaKnown RBP3.62□□□□□ -1.83
ATG17YLR423C BNI1P41832 1953 aa3.62□□□□□ -1.83
ATG17YLR423C BUD4P47136 1447 aa3.61□□□□□ -1.83
ATG17YLR423C SPC25P40014 221 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 84.9 ms