RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W PRX1P34227 261 aaKnown RBP1.6□□□□□ -2.15
VPS38YLR360W YUH1P35127 236 aa1.6□□□□□ -2.15
VPS38YLR360W SKG1P36169 355 aa1.6□□□□□ -2.15
VPS38YLR360W DOG1P38774 246 aa1.6□□□□□ -2.15
VPS38YLR360W GIM4P40005 111 aaKnown RBP1.6□□□□□ -2.15
VPS38YLR360W GTT1P40582 234 aa1.6□□□□□ -2.15
VPS38YLR360W DIE2P50076 525 aa1.6□□□□□ -2.15
VPS38YLR360W ERG25P53045 309 aa1.6□□□□□ -2.15
VPS38YLR360W MRPS17Q03246 237 aaPredicted RBP1.6□□□□□ -2.15
VPS38YLR360W YMD8Q03697 442 aa1.6□□□□□ -2.15
VPS38YLR360W RFU1Q08003 200 aa1.6□□□□□ -2.15
VPS38YLR360W GRE1Q08969 168 aa1.6□□□□□ -2.15
VPS38YLR360W YCT1Q12235 531 aa1.6□□□□□ -2.15
VPS38YLR360W ATP14Q12349 124 aa1.6□□□□□ -2.15
VPS38YLR360W GTT2Q12390 233 aa1.6□□□□□ -2.15
VPS38YLR360W YHR213W-AQ8TGT4 77 aa1.6□□□□□ -2.15
VPS38YLR360W DDP1Q99321 188 aaKnown RBP1.6□□□□□ -2.15
VPS38YLR360W HKR1P41809 1802 aa1.59□□□□□ -2.15
VPS38YLR360W RPL9AP05738 191 aaKnown RBP1.59□□□□□ -2.16
VPS38YLR360W YFR010W-AP0C5N0 62 aa1.59□□□□□ -2.16
VPS38YLR360W TCP1P12612 559 aaKnown RBP1.59□□□□□ -2.16
VPS38YLR360W MDH3P32419 343 aaKnown RBP RIP-Chip data1.59□□□□□ -2.16not detected
VPS38YLR360W PTC1P35182 281 aa1.59□□□□□ -2.16
VPS38YLR360W NVJ1P38881 321 aa1.59□□□□□ -2.16
VPS38YLR360W SMX2P40204 77 aaKnown RBP1.59□□□□□ -2.16
VPS38YLR360W PRM10P42946 383 aa1.59□□□□□ -2.16
VPS38YLR360W RPC17P47076 161 aa1.59□□□□□ -2.16
VPS38YLR360W CCC1P47818 322 aa1.59□□□□□ -2.16
VPS38YLR360W RPL9BP51401 191 aaKnown RBP1.59□□□□□ -2.16
VPS38YLR360W DOC1P53068 250 aa1.59□□□□□ -2.16
VPS38YLR360W TMA20P89886 181 aaPredicted RBP1.59□□□□□ -2.16
VPS38YLR360W CYT2Q00873 224 aa1.59□□□□□ -2.16
VPS38YLR360W YDR248CQ03786 193 aa1.59□□□□□ -2.16
VPS38YLR360W ATG39Q06159 398 aa1.59□□□□□ -2.16
VPS38YLR360W ATG31Q12421 196 aa1.59□□□□□ -2.16
VPS38YLR360W NCB2Q92317 146 aa1.59□□□□□ -2.16
VPS38YLR360W STT4P37297 1900 aa1.59□□□□□ -2.16
VPS38YLR360W CDC8P00572 216 aa1.58□□□□□ -2.16
VPS38YLR360W KIN28P06242 306 aa1.58□□□□□ -2.16
VPS38YLR360W CDC7P06243 507 aa1.58□□□□□ -2.16
VPS38YLR360W URA6P15700 204 aa1.58□□□□□ -2.16
VPS38YLR360W CBF1P17106 351 aa1.58□□□□□ -2.16
VPS38YLR360W TCA17P32613 152 aa1.58□□□□□ -2.16
VPS38YLR360W CBT1P36038 271 aaPredicted RBP1.58□□□□□ -2.16
VPS38YLR360W PHO88P38264 188 aaPredicted RBP1.58□□□□□ -2.16
VPS38YLR360W URA8P38627 578 aaPredicted RBP1.58□□□□□ -2.16
VPS38YLR360W YHR127WP38833 243 aaKnown RBP1.58□□□□□ -2.16
VPS38YLR360W AIM18P38884 321 aa1.58□□□□□ -2.16
VPS38YLR360W VTC1P40046 129 aaRIP-Chip data1.58□□□□□ -2.16not detected
VPS38YLR360W SOK1P40317 901 aa1.58□□□□□ -2.16
VPS38YLR360W BMT5P40493 336 aa1.58□□□□□ -2.16
VPS38YLR360W LIA1P47120 325 aaKnown RBP1.58□□□□□ -2.16
VPS38YLR360W DID2P69771 204 aa1.58□□□□□ -2.16
VPS38YLR360W YDC1Q02896 317 aa1.58□□□□□ -2.16
VPS38YLR360W GIM5Q04493 163 aa1.58□□□□□ -2.16
VPS38YLR360W YOR029WQ12243 111 aa1.58□□□□□ -2.16
VPS38YLR360W FYV7Q12247 151 aa1.58□□□□□ -2.16
VPS38YLR360W YOR214CQ12282 236 aa1.58□□□□□ -2.16
VPS38YLR360W RIM15P43565 1770 aa1.57□□□□□ -2.16
VPS38YLR360W HTB1P02293 131 aaKnown RBP1.57□□□□□ -2.16
VPS38YLR360W HTB2P02294 131 aa1.57□□□□□ -2.16
VPS38YLR360W PET54P10834 293 aa1.57□□□□□ -2.16
VPS38YLR360W IDH1P28834 360 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
VPS38YLR360W OAC1P32332 324 aa1.57□□□□□ -2.16
VPS38YLR360W ETR1P38071 380 aa1.57□□□□□ -2.16
VPS38YLR360W YBR032WP38223 100 aa1.57□□□□□ -2.16
VPS38YLR360W ERV15P38312 142 aa1.57□□□□□ -2.16
VPS38YLR360W YHR022CP38763 256 aa1.57□□□□□ -2.16
VPS38YLR360W CYC2P38909 366 aa1.57□□□□□ -2.16
VPS38YLR360W GNA1P43577 159 aaPredicted RBP1.57□□□□□ -2.16
VPS38YLR360W PAC10P48363 199 aa1.57□□□□□ -2.16
VPS38YLR360W CWC23P52868 283 aaPredicted RBP1.57□□□□□ -2.16
VPS38YLR360W YGL204CP53089 101 aa1.57□□□□□ -2.16
VPS38YLR360W YGR042WP53227 271 aa1.57□□□□□ -2.16
VPS38YLR360W YNL046WP53956 172 aa1.57□□□□□ -2.16
VPS38YLR360W LDB18Q07887 179 aa1.57□□□□□ -2.16
VPS38YLR360W HTL1Q9URQ5 78 aa1.57□□□□□ -2.16
VPS38YLR360W Q0144Q9ZZW2 109 aa1.57□□□□□ -2.16
VPS38YLR360W MSW1P04803 379 aa1.56□□□□□ -2.16
VPS38YLR360W RPL35AP0CX84 120 aaKnown RBP1.56□□□□□ -2.16
VPS38YLR360W RPL35BP0CX85 120 aaKnown RBP1.56□□□□□ -2.16
VPS38YLR360W ERD2P18414 219 aa1.56□□□□□ -2.16
VPS38YLR360W COQ1P18900 473 aa1.56□□□□□ -2.16
VPS38YLR360W RPS5P26783 225 aaKnown RBP1.56□□□□□ -2.16
VPS38YLR360W ARO7P32178 256 aa1.56□□□□□ -2.16
VPS38YLR360W TVP38P36164 337 aa1.56□□□□□ -2.16
VPS38YLR360W YBR013CP38215 129 aa1.56□□□□□ -2.16
VPS38YLR360W RTR1P40084 226 aaPredicted RBP1.56□□□□□ -2.16
VPS38YLR360W TIR3P40552 269 aa1.56□□□□□ -2.16
VPS38YLR360W MSS2P40990 351 aa1.56□□□□□ -2.16
VPS38YLR360W YGR201CP42936 225 aa1.56□□□□□ -2.16
VPS38YLR360W NSA1P53136 463 aaPredicted RBP1.56□□□□□ -2.16
VPS38YLR360W ERV14P53173 138 aa1.56□□□□□ -2.16
VPS38YLR360W HHO1P53551 258 aa1.56□□□□□ -2.16
VPS38YLR360W YNR062CP53748 327 aa1.56□□□□□ -2.16
VPS38YLR360W NOP13P53883 403 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16not detected
VPS38YLR360W COG5P53951 403 aa1.56□□□□□ -2.16
VPS38YLR360W CWC27Q02770 301 aa1.56□□□□□ -2.16
VPS38YLR360W CSN9Q03981 162 aa1.56□□□□□ -2.16
VPS38YLR360W TVP18Q04767 167 aa1.56□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 115.7 ms