RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	URB1	P34241	1764 aa	Known RBP	0.85	□□□□□ -2.27
YCS4	YLR272C	CSG2	P35206	410 aa		0.85	□□□□□ -2.27
YCS4	YLR272C	EFM5	P53200	248 aa	Known RBP	0.85	□□□□□ -2.27
YCS4	YLR272C	YGR026W	P53217	278 aa		0.85	□□□□□ -2.27
YCS4	YLR272C	APJ1	P53940	528 aa		0.85	□□□□□ -2.27
YCS4	YLR272C	YMR114C	Q04471	368 aa	Known RBP	0.85	□□□□□ -2.27
YCS4	YLR272C	TY4B-H	P0C2J7	1802 aa		0.84	□□□□□ -2.27
YCS4	YLR272C	TY4B-J	P47024	1803 aa		0.84	□□□□□ -2.27
YCS4	YLR272C	YAR023C	D6VPM8	179 aa		0.84	□□□□□ -2.27
YCS4	YLR272C	RPL22A	P05749	121 aa	Known RBP	0.84	□□□□□ -2.27
YCS4	YLR272C	SPT3	P06844	337 aa		0.84	□□□□□ -2.27
YCS4	YLR272C	BET1	P22804	142 aa		0.84	□□□□□ -2.27
YCS4	YLR272C	RPB9	P27999	122 aa		0.84	□□□□□ -2.27
YCS4	YLR272C	PAM17	P36147	197 aa		0.84	□□□□□ -2.27
YCS4	YLR272C	MRPL27	P36526	146 aa	Predicted RBP	0.84	□□□□□ -2.27
YCS4	YLR272C	TEM1	P38987	245 aa		0.84	□□□□□ -2.27
YCS4	YLR272C	COG3	P40094	801 aa		0.84	□□□□□ -2.27
YCS4	YLR272C	POG1	P40473	351 aa		0.84	□□□□□ -2.27
YCS4	YLR272C	MIC19	P43594	170 aa		0.84	□□□□□ -2.27
YCS4	YLR272C	FCF1	Q05498	189 aa	Predicted RBP	0.84	□□□□□ -2.27
YCS4	YLR272C	TIM22	Q12328	207 aa		0.84	□□□□□ -2.27
YCS4	YLR272C	YBR056W-A	I2HB52	66 aa		0.84	□□□□□ -2.28
YCS4	YLR272C	SNF4	P12904	322 aa		0.84	□□□□□ -2.28
YCS4	YLR272C	YCR090C	P25654	182 aa	Known RBP	0.84	□□□□□ -2.28
YCS4	YLR272C	MNN5	P46982	586 aa		0.84	□□□□□ -2.28
YCS4	YLR272C	YJL027C	P47063	138 aa	Predicted RBP	0.84	□□□□□ -2.28
YCS4	YLR272C	YGL204C	P53089	101 aa		0.84	□□□□□ -2.28
YCS4	YLR272C	PRM8	P53174	237 aa		0.84	□□□□□ -2.28
YCS4	YLR272C	YDR391C	Q04170	232 aa		0.84	□□□□□ -2.28
YCS4	YLR272C	RAD50	P12753	1312 aa		0.84	□□□□□ -2.28
YCS4	YLR272C	ECM14	P38836	430 aa		0.84	□□□□□ -2.28
YCS4	YLR272C	YER189W	P40104	122 aa		0.84	□□□□□ -2.28
YCS4	YLR272C	HYR1	P40581	163 aa	Known RBP	0.84	□□□□□ -2.28
YCS4	YLR272C	CUP9	P41817	306 aa		0.84	□□□□□ -2.28
YCS4	YLR272C	HHO1	P53551	258 aa		0.84	□□□□□ -2.28
YCS4	YLR272C	TVP15	Q03860	143 aa		0.84	□□□□□ -2.28
YCS4	YLR272C	RAV2	Q03956	351 aa		0.84	□□□□□ -2.28
YCS4	YLR272C	YPR127W	Q06494	345 aa		0.84	□□□□□ -2.28
YCS4	YLR272C	YOR283W	Q12040	230 aa	Known RBP	0.84	□□□□□ -2.28
YCS4	YLR272C	YDR018C	Q12185	396 aa		0.84	□□□□□ -2.28
YCS4	YLR272C	LSO2	Q3E772	92 aa	Known RBP	0.84	□□□□□ -2.28
YCS4	YLR272C	NCB2	Q92317	146 aa		0.84	□□□□□ -2.28
YCS4	YLR272C	RIM15	P43565	1770 aa		0.83	□□□□□ -2.28
YCS4	YLR272C	SEC4	P07560	215 aa	Known RBP	0.83	□□□□□ -2.28
YCS4	YLR272C	QCR8	P08525	94 aa		0.83	□□□□□ -2.28
YCS4	YLR272C	OPY1	P38271	328 aa		0.83	□□□□□ -2.28
YCS4	YLR272C	YER121W	P40076	114 aa		0.83	□□□□□ -2.28
YCS4	YLR272C	TMA22	P47089	198 aa	Predicted RBP	0.83	□□□□□ -2.28
YCS4	YLR272C	ARP3	P47117	449 aa	Known RBP	0.83	□□□□□ -2.28
YCS4	YLR272C	NRK1	P53915	240 aa		0.83	□□□□□ -2.28
YCS4	YLR272C	YNL046W	P53956	172 aa		0.83	□□□□□ -2.28
YCS4	YLR272C	YHP1	Q04116	353 aa		0.83	□□□□□ -2.28
YCS4	YLR272C	SPG3	Q04398	127 aa	Predicted RBP	0.83	□□□□□ -2.28
YCS4	YLR272C	YET3	Q07451	203 aa		0.83	□□□□□ -2.28
YCS4	YLR272C	CDC7	P06243	507 aa		0.83	□□□□□ -2.28
YCS4	YLR272C	MRS1	P07266	363 aa		0.83	□□□□□ -2.28
YCS4	YLR272C	YGL041W-A	P0C5N3	154 aa		0.83	□□□□□ -2.28
YCS4	YLR272C	URA8	P38627	578 aa	Predicted RBP	0.83	□□□□□ -2.28
YCS4	YLR272C	YLR460C	P54007	376 aa		0.83	□□□□□ -2.28
YCS4	YLR272C	YPR202W	Q08993	238 aa		0.83	□□□□□ -2.28
YCS4	YLR272C	FCY1	Q12178	158 aa		0.83	□□□□□ -2.28
YCS4	YLR272C	USB1	Q12208	290 aa	Known RBP	0.83	□□□□□ -2.28
YCS4	YLR272C	TPI1	P00942	248 aa	Known RBP	0.82	□□□□□ -2.28
YCS4	YLR272C	SRP102	P36057	244 aa	Predicted RBP	0.82	□□□□□ -2.28
YCS4	YLR272C	PAN3	P36102	679 aa	Predicted RBP	0.82	□□□□□ -2.28
YCS4	YLR272C	POP4	P38336	279 aa		0.82	□□□□□ -2.28
YCS4	YLR272C	LSM4	P40070	187 aa	Known RBP	0.82	□□□□□ -2.28
YCS4	YLR272C	SMD1	Q02260	146 aa	Predicted RBP	0.82	□□□□□ -2.28
YCS4	YLR272C	HNT1	Q04344	158 aa	Known RBP	0.82	□□□□□ -2.28
YCS4	YLR272C	YRF1-3	P0CX14	1859 aa		0.82	□□□□□ -2.28
YCS4	YLR272C	YRF1-7	P0CX15	1859 aa		0.82	□□□□□ -2.28
YCS4	YLR272C	YRF1-6	P53819	1859 aa		0.82	□□□□□ -2.28
YCS4	YLR272C	DPM1	P14020	267 aa	Known RBP	0.82	□□□□□ -2.28
YCS4	YLR272C	KRE1	P17260	313 aa		0.82	□□□□□ -2.28
YCS4	YLR272C	CCA1	P21269	546 aa		0.82	□□□□□ -2.28
YCS4	YLR272C	MID2	P36027	376 aa		0.82	□□□□□ -2.28
YCS4	YLR272C	MTW1	P39731	289 aa		0.82	□□□□□ -2.28
YCS4	YLR272C	SOL1	P50278	321 aa		0.82	□□□□□ -2.28
YCS4	YLR272C	NBP35	P52920	328 aa		0.82	□□□□□ -2.28
YCS4	YLR272C	MRH4	P53166	561 aa		0.82	□□□□□ -2.28
YCS4	YLR272C	CYT2	Q00873	224 aa		0.82	□□□□□ -2.28
YCS4	YLR272C	UIP4	Q08926	304 aa		0.82	□□□□□ -2.28
YCS4	YLR272C	COS8	P38723	381 aa		0.82	□□□□□ -2.28
YCS4	YLR272C	VMA22	P38784	181 aa		0.82	□□□□□ -2.28
YCS4	YLR272C	YGR219W	P53307	113 aa		0.82	□□□□□ -2.28
YCS4	YLR272C	YNL247W	P53852	767 aa	Known RBP	0.82	□□□□□ -2.28
YCS4	YLR272C	YMR253C	Q04835	414 aa		0.82	□□□□□ -2.28
YCS4	YLR272C	HCR1	Q05775	265 aa	Known RBP	0.82	□□□□□ -2.28
YCS4	YLR272C	TLG2	Q08144	397 aa		0.82	□□□□□ -2.28
YCS4	YLR272C	CSM4	Q08955	156 aa		0.82	□□□□□ -2.28
YCS4	YLR272C	RPL2A	P0CX45	254 aa	Known RBP	0.81	□□□□□ -2.28
YCS4	YLR272C	RPL2B	P0CX46	254 aa	Known RBP	0.81	□□□□□ -2.28
YCS4	YLR272C	MIG1	P27705	504 aa		0.81	□□□□□ -2.28
YCS4	YLR272C	SHE3	P38272	425 aa	Known RBP	0.81	□□□□□ -2.28
YCS4	YLR272C	MRPL49	P40858	161 aa	Predicted RBP	0.81	□□□□□ -2.28
YCS4	YLR272C	FAR7	P43592	221 aa		0.81	□□□□□ -2.28
YCS4	YLR272C	ERJ5	P43613	295 aa	Predicted RBP	0.81	□□□□□ -2.28
YCS4	YLR272C	ERG25	P53045	309 aa		0.81	□□□□□ -2.28
YCS4	YLR272C	COG5	P53951	403 aa		0.81	□□□□□ -2.28
YCS4	YLR272C	PLP1	Q04004	230 aa		0.81	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 79.7 ms