RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C YPR014CQ6B0W2 109 aa1.48□□□□□ -2.17
ATG38YLR211C YML100W-AQ8TGT0 57 aa1.48□□□□□ -2.17
ATG38YLR211C UBC8P28263 218 aa1.47□□□□□ -2.17
ATG38YLR211C TVP38P36164 337 aa1.47□□□□□ -2.17
ATG38YLR211C MRPL17P36528 281 aa1.47□□□□□ -2.17
ATG38YLR211C FMP23P38231 175 aa1.47□□□□□ -2.17
ATG38YLR211C OPY1P38271 328 aa1.47□□□□□ -2.17
ATG38YLR211C YHL026CP38740 315 aa1.47□□□□□ -2.17
ATG38YLR211C AVT2P39981 480 aa1.47□□□□□ -2.17
ATG38YLR211C SER2P42941 309 aa1.47□□□□□ -2.17
ATG38YLR211C YGR026WP53217 278 aa1.47□□□□□ -2.17
ATG38YLR211C YDR476CQ03362 224 aa1.47□□□□□ -2.17
ATG38YLR211C PLP1Q04004 230 aa1.47□□□□□ -2.17
ATG38YLR211C HPT1Q04178 221 aaKnown RBP1.47□□□□□ -2.17
ATG38YLR211C AKR2Q12013 749 aa1.47□□□□□ -2.17
ATG38YLR211C YOR342CQ12182 319 aa1.47□□□□□ -2.17
ATG38YLR211C TSC3Q3E790 80 aa1.47□□□□□ -2.17
ATG38YLR211C MSW1P04803 379 aa1.46□□□□□ -2.18
ATG38YLR211C RPL2AP0CX45 254 aaKnown RBP1.46□□□□□ -2.18
ATG38YLR211C RPL2BP0CX46 254 aaKnown RBP1.46□□□□□ -2.18
ATG38YLR211C PEX34P25584 144 aa1.46□□□□□ -2.18
ATG38YLR211C OCH1P31755 480 aa1.46□□□□□ -2.18
ATG38YLR211C CPR5P35176 225 aa1.46□□□□□ -2.18
ATG38YLR211C YEA4P40004 342 aa1.46□□□□□ -2.18
ATG38YLR211C TIF34P40217 347 aaKnown RBP1.46□□□□□ -2.18
ATG38YLR211C RFC2P40348 353 aa1.46□□□□□ -2.18
ATG38YLR211C SKI6P46948 246 aaPredicted RBP1.46□□□□□ -2.18
ATG38YLR211C EAF6P47128 113 aa1.46□□□□□ -2.18
ATG38YLR211C AIF1P52923 378 aa1.46□□□□□ -2.18
ATG38YLR211C YGL101WP53144 215 aa1.46□□□□□ -2.18
ATG38YLR211C YMR099CQ03161 297 aaKnown RBP1.46□□□□□ -2.18
ATG38YLR211C SPC2Q04969 178 aa1.46□□□□□ -2.18
ATG38YLR211C FYV12Q08559 129 aa1.46□□□□□ -2.18
ATG38YLR211C EFG1Q3E705 233 aaKnown RBP1.46□□□□□ -2.18
ATG38YLR211C YOR1P53049 1477 aa1.45□□□□□ -2.18
ATG38YLR211C CPA1P07258 411 aaKnown RBP1.45□□□□□ -2.18
ATG38YLR211C UBI4P0CG63 381 aaKnown RBP1.45□□□□□ -2.18
ATG38YLR211C CCA1P21269 546 aa1.45□□□□□ -2.18
ATG38YLR211C MRPS28P21771 286 aa1.45□□□□□ -2.18
ATG38YLR211C SPO13P23624 291 aa1.45□□□□□ -2.18
ATG38YLR211C UPS2P35200 230 aa1.45□□□□□ -2.18
ATG38YLR211C SFK1P35735 353 aa1.45□□□□□ -2.18
ATG38YLR211C PAN3P36102 679 aaPredicted RBP1.45□□□□□ -2.18
ATG38YLR211C YHR180WP38868 163 aa1.45□□□□□ -2.18
ATG38YLR211C CYC2P38909 366 aa1.45□□□□□ -2.18
ATG38YLR211C RSM25P40496 264 aa1.45□□□□□ -2.18
ATG38YLR211C GVP36P40531 326 aaKnown RBP1.45□□□□□ -2.18
ATG38YLR211C YFL019CP43576 117 aa1.45□□□□□ -2.18
ATG38YLR211C TDA4P47153 279 aa1.45□□□□□ -2.18
ATG38YLR211C TMA20P89886 181 aaPredicted RBP1.45□□□□□ -2.18
ATG38YLR211C THI74Q04083 370 aa1.45□□□□□ -2.18
ATG38YLR211C NAT3Q06504 195 aa1.45□□□□□ -2.18
ATG38YLR211C DAS2Q12084 232 aa1.45□□□□□ -2.18
ATG38YLR211C DGK1Q12382 290 aa1.45□□□□□ -2.18
ATG38YLR211C FKS1P38631 1876 aaKnown RBP1.45□□□□□ -2.18
ATG38YLR211C POR1P04840 283 aaKnown RBP1.44□□□□□ -2.18
ATG38YLR211C NSP1P14907 823 aaKnown RBP1.44□□□□□ -2.18
ATG38YLR211C POP7P38291 140 aa1.44□□□□□ -2.18
ATG38YLR211C NSG1P38837 291 aa1.44□□□□□ -2.18
ATG38YLR211C GIM4P40005 111 aaKnown RBP1.44□□□□□ -2.18
ATG38YLR211C VTC1P40046 129 aaRIP-Chip data1.44□□□□□ -2.18not detected
ATG38YLR211C SNX4P47057 423 aa1.44□□□□□ -2.18
ATG38YLR211C MOG1P47123 218 aa1.44□□□□□ -2.18
ATG38YLR211C ORM1P53224 222 aa1.44□□□□□ -2.18
ATG38YLR211C YDL180WQ12301 547 aa1.44□□□□□ -2.18
ATG38YLR211C ATO3Q12359 275 aa1.44□□□□□ -2.18
ATG38YLR211C YAR023CD6VPM8 179 aa1.43□□□□□ -2.18
ATG38YLR211C PBI2P0CT04 75 aaKnown RBP1.43□□□□□ -2.18
ATG38YLR211C IDP1P21954 428 aaKnown RBP1.43□□□□□ -2.18
ATG38YLR211C IPI1P38803 334 aaPredicted RBP1.43□□□□□ -2.18
ATG38YLR211C PGD1P40356 397 aa1.43□□□□□ -2.18
ATG38YLR211C ERJ5P43613 295 aaPredicted RBP1.43□□□□□ -2.18
ATG38YLR211C YJR015WP47090 510 aa1.43□□□□□ -2.18
ATG38YLR211C TTI2P47168 421 aa1.43□□□□□ -2.18
ATG38YLR211C SBH1P52870 82 aa1.43□□□□□ -2.18
ATG38YLR211C YGL204CP53089 101 aa1.43□□□□□ -2.18
ATG38YLR211C YNR077CP53758 84 aa1.43□□□□□ -2.18
ATG38YLR211C LSM3P57743 89 aaKnown RBP1.43□□□□□ -2.18
ATG38YLR211C HHT1P61830 136 aa1.43□□□□□ -2.18
ATG38YLR211C DIG2Q03373 323 aaKnown RBP1.43□□□□□ -2.18
ATG38YLR211C VPS71Q03433 280 aa1.43□□□□□ -2.18
ATG38YLR211C NEJ1Q06148 342 aa1.43□□□□□ -2.18
ATG38YLR211C YLR046CQ12253 270 aa1.43□□□□□ -2.18
ATG38YLR211C RPL30P14120 105 aaKnown RBP1.42□□□□□ -2.18
ATG38YLR211C SCM4P32564 187 aa1.42□□□□□ -2.18
ATG38YLR211C NUF2P33895 451 aa1.42□□□□□ -2.18
ATG38YLR211C YER134CP40081 178 aa1.42□□□□□ -2.18
ATG38YLR211C APQ12P40532 138 aa1.42□□□□□ -2.18
ATG38YLR211C YGR201CP42936 225 aa1.42□□□□□ -2.18
ATG38YLR211C YGR042WP53227 271 aa1.42□□□□□ -2.18
ATG38YLR211C YGR219WP53307 113 aa1.42□□□□□ -2.18
ATG38YLR211C MPC3P53311 146 aa1.42□□□□□ -2.18
ATG38YLR211C PKR1Q03880 122 aaKnown RBP1.42□□□□□ -2.18
ATG38YLR211C RIB3Q99258 208 aa1.42□□□□□ -2.18
ATG38YLR211C ODC2Q99297 307 aa1.42□□□□□ -2.18
ATG38YLR211C TIR1P10863 254 aa1.41□□□□□ -2.18
ATG38YLR211C UMP1P38293 148 aa1.41□□□□□ -2.18
ATG38YLR211C YBR285WP38354 144 aa1.41□□□□□ -2.18
ATG38YLR211C TVP23P38962 199 aa1.41□□□□□ -2.18
ATG38YLR211C RPL33BP41056 107 aaKnown RBP1.41□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 97.5 ms