RNA–Protein interactions for RNA: YLR182W

SWI6, Transcript of Transcription cofactor, yeast

Gene SWI6, Length 2,412 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWI6	YLR182W	GIS3	Q12418	502 aa		0.73	□□□□□ -2.29
SWI6	YLR182W	YRF1-2	P40105	1681 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	USO1	P25386	1790 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	DNF3	Q12674	1656 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	AQY2	P0CD90	149 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	ATG22	P25568	528 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	PRP18	P33411	251 aa	Predicted RBP	0.72	□□□□□ -2.29
SWI6	YLR182W	APS1	P35181	156 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	FAR7	P43592	221 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	RAD17	P48581	401 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	TIM11	P81449	96 aa	Predicted RBP	0.72	□□□□□ -2.29
SWI6	YLR182W	YDR274C	P87283	123 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	TUS1	Q06412	1307 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	TRA1	P38811	3744 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	CDC33	P07260	213 aa	Known RBP	0.72	□□□□□ -2.29
SWI6	YLR182W	YRF1-3	P0CX14	1859 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	YRF1-7	P0CX15	1859 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	FPR1	P20081	114 aa	Known RBP	0.72	□□□□□ -2.29
SWI6	YLR182W	BMH2	P34730	273 aa	Known RBP	0.72	□□□□□ -2.29
SWI6	YLR182W	YRF1-6	P53819	1859 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	SNZ1	Q03148	297 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	YMD8	Q03697	442 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	RRP5	Q05022	1729 aa	Known RBP	0.72	□□□□□ -2.29
SWI6	YLR182W	YDR278C	Q05612	105 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	GGA1	Q06336	557 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	YOL160W	Q08321	113 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	YPL162C	Q12042	273 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	YCL012C	Q8J0M4	134 aa		0.72	□□□□□ -2.29
SWI6	YLR182W	UMP1	P38293	148 aa		0.71	□□□□□ -2.3
SWI6	YLR182W	VTC1	P40046	129 aa	RIP-Chip data	0.71	□□□□□ -2.3	RIP-Chip
SWI6	YLR182W	GVP36	P40531	326 aa	Known RBP	0.71	□□□□□ -2.3
SWI6	YLR182W	MPC3	P53311	146 aa		0.71	□□□□□ -2.3
SWI6	YLR182W	PDR17	P53844	350 aa		0.71	□□□□□ -2.3
SWI6	YLR182W	FSF1	Q12029	327 aa	Known RBP	0.71	□□□□□ -2.3
SWI6	YLR182W	RSF2	P46974	1380 aa		0.71	□□□□□ -2.3
SWI6	YLR182W	YBR121C-A	P0C5L4	52 aa		0.7	□□□□□ -2.3
SWI6	YLR182W	MRPL28	P36527	147 aa		0.7	□□□□□ -2.3
SWI6	YLR182W	PRE6	P40303	254 aa	Known RBP	0.7	□□□□□ -2.3
SWI6	YLR182W	MPA43	P53583	542 aa	Predicted RBP	0.7	□□□□□ -2.3
SWI6	YLR182W	LSO2	Q3E772	92 aa	Known RBP	0.7	□□□□□ -2.3
SWI6	YLR182W	TSC3	Q3E790	80 aa		0.7	□□□□□ -2.3
SWI6	YLR182W	SNF2	P22082	1703 aa		0.7	□□□□□ -2.3
SWI6	YLR182W	SAC3	P46674	1301 aa		0.7	□□□□□ -2.3
SWI6	YLR182W	IRA2	P19158	3079 aa		0.7	□□□□□ -2.3
SWI6	YLR182W	SIR2	P06700	562 aa		0.7	□□□□□ -2.3
SWI6	YLR182W	RPL24B	P24000	155 aa	Known RBP	0.7	□□□□□ -2.3
SWI6	YLR182W	SPS18	P32572	300 aa		0.7	□□□□□ -2.3
SWI6	YLR182W	RPL13B	P40212	199 aa	Known RBP	0.7	□□□□□ -2.3
SWI6	YLR182W	RPL13A	Q12690	199 aa	Predicted RBP	0.7	□□□□□ -2.3
SWI6	YLR182W	TY4B-H	P0C2J7	1802 aa		0.7	□□□□□ -2.3
SWI6	YLR182W	TY4B-J	P47024	1803 aa		0.7	□□□□□ -2.3
SWI6	YLR182W	RPL28	P02406	149 aa	Known RBP	0.69	□□□□□ -2.3
SWI6	YLR182W	GCN3	P14741	305 aa		0.69	□□□□□ -2.3
SWI6	YLR182W	MER1	P16523	270 aa		0.69	□□□□□ -2.3
SWI6	YLR182W	RFA3	P26755	122 aa	Known RBP	0.69	□□□□□ -2.3
SWI6	YLR182W	PTM1	P32857	523 aa		0.69	□□□□□ -2.3
SWI6	YLR182W	YET1	P35723	206 aa		0.69	□□□□□ -2.3
SWI6	YLR182W	COX15	P40086	486 aa		0.69	□□□□□ -2.3
SWI6	YLR182W	YFH7	P43591	353 aa		0.69	□□□□□ -2.3
SWI6	YLR182W	IRC18	P47056	224 aa		0.69	□□□□□ -2.3
SWI6	YLR182W	KNH1	P50112	268 aa		0.69	□□□□□ -2.3
SWI6	YLR182W	RAD50	P12753	1312 aa		0.69	□□□□□ -2.3
SWI6	YLR182W	LYS2	P07702	1392 aa		0.69	□□□□□ -2.3
SWI6	YLR182W	ROM2	P51862	1356 aa	Known RBP	0.69	□□□□□ -2.3
SWI6	YLR182W	URB1	P34241	1764 aa	Known RBP	0.69	□□□□□ -2.3
SWI6	YLR182W	DUR1,2	P32528	1835 aa	Known RBP	0.69	□□□□□ -2.3
SWI6	YLR182W	SLH1	P53327	1967 aa	Known RBP	0.69	□□□□□ -2.3
SWI6	YLR182W	RPL27A	P0C2H6	136 aa	Known RBP	0.69	□□□□□ -2.3
SWI6	YLR182W	RPB3	P16370	318 aa	Known RBP	0.69	□□□□□ -2.3
SWI6	YLR182W	JLP1	Q12358	412 aa		0.69	□□□□□ -2.3
SWI6	YLR182W	TY1B-NL2	Q99337	1749 aa	Known RBP	0.68	□□□□□ -2.3
SWI6	YLR182W	YLR236C	A0A023PZG4	107 aa		0.68	□□□□□ -2.3
SWI6	YLR182W	QCR8	P08525	94 aa		0.68	□□□□□ -2.3
SWI6	YLR182W	MATALPHA2	P0CY08	210 aa		0.68	□□□□□ -2.3
SWI6	YLR182W	HMLALPHA2	P0CY09	210 aa		0.68	□□□□□ -2.3
SWI6	YLR182W	KSS1	P14681	368 aa		0.68	□□□□□ -2.3
SWI6	YLR182W	MAK31	P23059	88 aa		0.68	□□□□□ -2.3
SWI6	YLR182W	SSO1	P32867	290 aa		0.68	□□□□□ -2.3
SWI6	YLR182W	ERG10	P41338	398 aa	Known RBP	0.68	□□□□□ -2.3
SWI6	YLR182W	LSM7	P53905	115 aa	Known RBP	0.68	□□□□□ -2.3
SWI6	YLR182W	COG5	P53951	403 aa		0.68	□□□□□ -2.3
SWI6	YLR182W	GPM2	Q12008	311 aa		0.68	□□□□□ -2.3
SWI6	YLR182W	DDP1	Q99321	188 aa	Known RBP	0.68	□□□□□ -2.3
SWI6	YLR182W	PMD1	P32634	1753 aa		0.68	□□□□□ -2.3
SWI6	YLR182W	TMA19	P35691	167 aa	Known RBP	0.68	□□□□□ -2.3
SWI6	YLR182W	YCR087C-A	P37263	153 aa		0.68	□□□□□ -2.3
SWI6	YLR182W	TCD1	P38756	429 aa		0.68	□□□□□ -2.3
SWI6	YLR182W	SMD2	Q06217	110 aa	Known RBP	0.68	□□□□□ -2.3
SWI6	YLR182W	ANT1	Q06497	328 aa		0.68	□□□□□ -2.3
SWI6	YLR182W	GPA2	P10823	449 aa		0.67	□□□□□ -2.3
SWI6	YLR182W	NHP6B	P11633	99 aa	Known RBP	0.67	□□□□□ -2.3
SWI6	YLR182W	STE18	P18852	110 aa		0.67	□□□□□ -2.3
SWI6	YLR182W	MRPS28	P21771	286 aa		0.67	□□□□□ -2.3
SWI6	YLR182W	HYR1	P40581	163 aa	Known RBP	0.67	□□□□□ -2.3
SWI6	YLR182W	YRB1	P41920	201 aa	Known RBP	0.67	□□□□□ -2.3
SWI6	YLR182W	GCN20	P43535	752 aa	Known RBP	0.67	□□□□□ -2.3
SWI6	YLR182W	GRX3	Q03835	250 aa		0.67	□□□□□ -2.3
SWI6	YLR182W	NCB2	Q92317	146 aa		0.67	□□□□□ -2.3
SWI6	YLR182W	TAO3	P40468	2376 aa		0.67	□□□□□ -2.3
SWI6	YLR182W	FLO1	P32768	1537 aa		0.67	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 53.4 ms