RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIC1	YLR039C	DID2	P69771	204 aa		1.29	□□□□□ -2.2
RIC1	YLR039C	YMD8	Q03697	442 aa		1.29	□□□□□ -2.2
RIC1	YLR039C	GGA1	Q06336	557 aa		1.29	□□□□□ -2.2
RIC1	YLR039C	AST2	P39945	430 aa	Known RBP	1.28	□□□□□ -2.2
RIC1	YLR039C	YRB2	P40517	327 aa		1.28	□□□□□ -2.2
RIC1	YLR039C	MRPL49	P40858	161 aa	Predicted RBP	1.28	□□□□□ -2.2
RIC1	YLR039C	PRM10	P42946	383 aa		1.28	□□□□□ -2.2
RIC1	YLR039C	MMS2	P53152	137 aa		1.28	□□□□□ -2.2
RIC1	YLR039C	LSM7	P53905	115 aa	Known RBP	1.28	□□□□□ -2.2
RIC1	YLR039C	LSO2	Q3E772	92 aa	Known RBP	1.28	□□□□□ -2.2
RIC1	YLR039C	CDC8	P00572	216 aa		1.28	□□□□□ -2.21
RIC1	YLR039C	YHL026C	P38740	315 aa		1.28	□□□□□ -2.21
RIC1	YLR039C	YHR180W	P38868	163 aa		1.28	□□□□□ -2.21
RIC1	YLR039C	MNN5	P46982	586 aa		1.28	□□□□□ -2.21
RIC1	YLR039C	YGR026W	P53217	278 aa		1.28	□□□□□ -2.21
RIC1	YLR039C	MCP1	Q12106	302 aa		1.28	□□□□□ -2.21
RIC1	YLR039C	UTR5	P32630	166 aa		1.27	□□□□□ -2.21
RIC1	YLR039C	YIL001W	P40560	513 aa		1.27	□□□□□ -2.21
RIC1	YLR039C	YNG1	Q08465	219 aa		1.27	□□□□□ -2.21
RIC1	YLR039C	YPL162C	Q12042	273 aa		1.27	□□□□□ -2.21
RIC1	YLR039C	RAS2	P01120	322 aa	Known RBP	1.27	□□□□□ -2.21
RIC1	YLR039C	ADH3	P07246	375 aa	Known RBP	1.27	□□□□□ -2.21
RIC1	YLR039C	MRS1	P07266	363 aa		1.27	□□□□□ -2.21
RIC1	YLR039C	ATG22	P25568	528 aa		1.27	□□□□□ -2.21
RIC1	YLR039C	CLB6	P32943	380 aa		1.27	□□□□□ -2.21
RIC1	YLR039C	RGM1	Q00453	211 aa		1.27	□□□□□ -2.21
RIC1	YLR039C	ATO3	Q12359	275 aa		1.27	□□□□□ -2.21
RIC1	YLR039C	MHT1	Q12525	324 aa		1.27	□□□□□ -2.21
RIC1	YLR039C	POP4	P38336	279 aa		1.26	□□□□□ -2.21
RIC1	YLR039C	YJL027C	P47063	138 aa	Predicted RBP	1.26	□□□□□ -2.21
RIC1	YLR039C	DAN1	P47178	298 aa		1.26	□□□□□ -2.21
RIC1	YLR039C	MSW1	P04803	379 aa		1.26	□□□□□ -2.21
RIC1	YLR039C	YOR062C	P36025	268 aa		1.26	□□□□□ -2.21
RIC1	YLR039C	RMD6	P39975	231 aa		1.26	□□□□□ -2.21
RIC1	YLR039C	ERG10	P41338	398 aa	Known RBP	1.26	□□□□□ -2.21
RIC1	YLR039C	FUS2	Q05670	677 aa		1.26	□□□□□ -2.21
RIC1	YLR039C	GPM2	Q12008	311 aa		1.26	□□□□□ -2.21
RIC1	YLR039C	MDN1	Q12019	4910 aa	Known RBP	1.26	□□□□□ -2.21
RIC1	YLR039C	FCY21	P40039	528 aa		1.26	□□□□□ -2.21
RIC1	YLR039C	COG5	P53951	403 aa		1.26	□□□□□ -2.21
RIC1	YLR039C	YDR249C	Q03787	373 aa		1.26	□□□□□ -2.21
RIC1	YLR039C	ARO80	Q04052	950 aa		1.26	□□□□□ -2.21
RIC1	YLR039C	TRM5	P38793	499 aa		1.25	□□□□□ -2.21
RIC1	YLR039C	AIF1	P52923	378 aa		1.25	□□□□□ -2.21
RIC1	YLR039C	MRPS8	Q03799	155 aa		1.25	□□□□□ -2.21
RIC1	YLR039C	NEJ1	Q06148	342 aa		1.25	□□□□□ -2.21
RIC1	YLR039C	RPL25	P04456	142 aa	Known RBP	1.25	□□□□□ -2.21
RIC1	YLR039C	KSS1	P14681	368 aa		1.24	□□□□□ -2.21
RIC1	YLR039C	YNR077C	P53758	84 aa		1.24	□□□□□ -2.21
RIC1	YLR039C	SNO1	Q03144	224 aa		1.24	□□□□□ -2.21
RIC1	YLR039C	YML108W	Q03759	105 aa		1.24	□□□□□ -2.21
RIC1	YLR039C	EMC6	Q12431	108 aa		1.24	□□□□□ -2.21
RIC1	YLR039C	TIM9	O74700	87 aa		1.24	□□□□□ -2.21
RIC1	YLR039C	PUT1	P09368	476 aa		1.24	□□□□□ -2.21
RIC1	YLR039C	ATP15	P21306	62 aa		1.24	□□□□□ -2.21
RIC1	YLR039C	MRPL17	P36528	281 aa		1.24	□□□□□ -2.21
RIC1	YLR039C	YER034W	P40022	185 aa	Known RBP	1.24	□□□□□ -2.21
RIC1	YLR039C	ICE2	P40499	491 aa		1.24	□□□□□ -2.21
RIC1	YLR039C	CGI121	Q03705	181 aa	Known RBP	1.24	□□□□□ -2.21
RIC1	YLR039C	MDM32	Q12171	622 aa		1.24	□□□□□ -2.21
RIC1	YLR039C	IGO2	Q9P305	131 aa		1.24	□□□□□ -2.21
RIC1	YLR039C	YLR422W	Q06409	1932 aa		1.24	□□□□□ -2.21
RIC1	YLR039C	SIR2	P06700	562 aa		1.24	□□□□□ -2.21
RIC1	YLR039C	SNF6	P18888	332 aa		1.24	□□□□□ -2.21
RIC1	YLR039C	ATP7	P30902	174 aa		1.24	□□□□□ -2.21
RIC1	YLR039C	HYR1	P40581	163 aa	Known RBP	1.24	□□□□□ -2.21
RIC1	YLR039C	CIS3	P47001	227 aa		1.24	□□□□□ -2.21
RIC1	YLR039C	UBC12	P52491	188 aa		1.24	□□□□□ -2.21
RIC1	YLR039C	YNR062C	P53748	327 aa		1.24	□□□□□ -2.21
RIC1	YLR039C	SWP1	Q02795	286 aa		1.24	□□□□□ -2.21
RIC1	YLR039C	NOC4	Q06512	552 aa	Predicted RBP	1.24	□□□□□ -2.21
RIC1	YLR039C	RPB3	P16370	318 aa	Known RBP	1.23	□□□□□ -2.21
RIC1	YLR039C	YCR090C	P25654	182 aa	Known RBP	1.23	□□□□□ -2.21
RIC1	YLR039C	YKR041W	P36134	250 aa		1.23	□□□□□ -2.21
RIC1	YLR039C	RSM25	P40496	264 aa		1.23	□□□□□ -2.21
RIC1	YLR039C	HOP2	P53187	214 aa		1.23	□□□□□ -2.21
RIC1	YLR039C	YNL184C	P53876	108 aa		1.23	□□□□□ -2.21
RIC1	YLR039C	GRX8	Q05926	109 aa		1.23	□□□□□ -2.21
RIC1	YLR039C	YHR086W-A	Q3E746	53 aa		1.23	□□□□□ -2.21
RIC1	YLR039C	SCL1	P21243	252 aa	Known RBP	1.23	□□□□□ -2.21
RIC1	YLR039C	MEI4	P29467	408 aa		1.23	□□□□□ -2.21
RIC1	YLR039C	YGR219W	P53307	113 aa		1.23	□□□□□ -2.21
RIC1	YLR039C	YIP3	P53633	176 aa		1.23	□□□□□ -2.21
RIC1	YLR039C	RTC4	P53850	401 aa		1.23	□□□□□ -2.21
RIC1	YLR039C	YDR274C	P87283	123 aa		1.23	□□□□□ -2.21
RIC1	YLR039C	MDM35	O60200	86 aa		1.22	□□□□□ -2.21
RIC1	YLR039C	MAG1	P22134	296 aa	Known RBP	1.22	□□□□□ -2.21
RIC1	YLR039C	BET1	P22804	142 aa		1.22	□□□□□ -2.21
RIC1	YLR039C	PEX4	P29340	183 aa		1.22	□□□□□ -2.21
RIC1	YLR039C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	1.22	□□□□□ -2.21	not detected
RIC1	YLR039C	TVP38	P36164	337 aa		1.22	□□□□□ -2.21
RIC1	YLR039C	PGD1	P40356	397 aa		1.22	□□□□□ -2.21
RIC1	YLR039C	ARP3	P47117	449 aa	Known RBP	1.22	□□□□□ -2.21
RIC1	YLR039C	IGO1	P53897	168 aa		1.22	□□□□□ -2.21
RIC1	YLR039C	CPA1	P07258	411 aa	Known RBP	1.22	□□□□□ -2.21
RIC1	YLR039C	PET9	P18239	318 aa	Known RBP	1.22	□□□□□ -2.21
RIC1	YLR039C	CNB1	P25296	175 aa		1.22	□□□□□ -2.21
RIC1	YLR039C	BOL2	P53082	120 aa		1.22	□□□□□ -2.21
RIC1	YLR039C	NRK1	P53915	240 aa		1.22	□□□□□ -2.21
RIC1	YLR039C	BRX1	Q08235	291 aa	Known RBP	1.22	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 52.9 ms