RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C ATG31Q12421 196 aa2.27□□□□□ -2.05
SED5YLR026C SGA1P08019 549 aa2.26□□□□□ -2.05
SED5YLR026C BUB2P26448 306 aaPredicted RBP2.26□□□□□ -2.05
SED5YLR026C MDH3P32419 343 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
SED5YLR026C YUH1P35127 236 aa2.26□□□□□ -2.05
SED5YLR026C AGE2P40529 298 aa2.26□□□□□ -2.05
SED5YLR026C PAC10P48363 199 aa2.26□□□□□ -2.05
SED5YLR026C SLM2P53955 656 aa2.26□□□□□ -2.05
SED5YLR026C SRL4Q03085 281 aa2.26□□□□□ -2.05
SED5YLR026C SSQ1Q05931 657 aaPredicted RBP2.26□□□□□ -2.05
SED5YLR026C SPO77Q06134 477 aa2.26□□□□□ -2.05
SED5YLR026C CSM4Q08955 156 aa2.26□□□□□ -2.05
SED5YLR026C RIO1Q12196 484 aaKnown RBP2.26□□□□□ -2.05
SED5YLR026C SMT3Q12306 101 aaKnown RBP2.26□□□□□ -2.05
SED5YLR026C YCL048W-AQ2V2Q2 79 aa2.26□□□□□ -2.05
SED5YLR026C YHR086W-AQ3E746 53 aa2.26□□□□□ -2.05
SED5YLR026C SCO1P23833 295 aa2.25□□□□□ -2.05
SED5YLR026C YKL075CP36083 450 aa2.25□□□□□ -2.05
SED5YLR026C GOS1P38736 223 aa2.25□□□□□ -2.05
SED5YLR026C YHB1P39676 399 aaKnown RBP2.25□□□□□ -2.05
SED5YLR026C GLR1P41921 483 aaKnown RBP2.25□□□□□ -2.05
SED5YLR026C TIM21P53220 239 aa2.25□□□□□ -2.05
SED5YLR026C NOP19P53317 196 aaPredicted RBP2.25□□□□□ -2.05
SED5YLR026C YNL046WP53956 172 aa2.25□□□□□ -2.05
SED5YLR026C YMR279CQ03263 540 aa2.25□□□□□ -2.05
SED5YLR026C FIT3Q08907 204 aa2.25□□□□□ -2.05
SED5YLR026C NIP7Q08962 181 aaKnown RBP2.25□□□□□ -2.05
SED5YLR026C MCP1Q12106 302 aa2.25□□□□□ -2.05
SED5YLR026C MSH5Q12175 901 aa2.25□□□□□ -2.05
SED5YLR026C YOR029WQ12243 111 aa2.25□□□□□ -2.05
SED5YLR026C ISD11Q6Q560 94 aa2.25□□□□□ -2.05
SED5YLR026C TIM9O74700 87 aa2.24□□□□□ -2.05
SED5YLR026C ERD2P18414 219 aa2.24□□□□□ -2.05
SED5YLR026C FIG1P38224 298 aa2.24□□□□□ -2.05
SED5YLR026C THO1P40040 218 aaKnown RBP2.24□□□□□ -2.05
SED5YLR026C SMD3P43321 101 aaKnown RBP2.24□□□□□ -2.05
SED5YLR026C YJR012CP47087 207 aa2.24□□□□□ -2.05
SED5YLR026C YNR064CP53750 290 aa2.24□□□□□ -2.05
SED5YLR026C YDR476CQ03362 224 aa2.24□□□□□ -2.05
SED5YLR026C YDR124WQ04608 324 aa2.24□□□□□ -2.05
SED5YLR026C SML1Q04964 104 aa2.24□□□□□ -2.05
SED5YLR026C YLR173WQ06247 608 aa2.24□□□□□ -2.05
SED5YLR026C GRE1Q08969 168 aa2.24□□□□□ -2.05
SED5YLR026C YLR053CQ12026 108 aa2.24□□□□□ -2.05
SED5YLR026C USB1Q12208 290 aaKnown RBP2.24□□□□□ -2.05
SED5YLR026C YPL119C-AQ3E751 87 aa2.24□□□□□ -2.05
SED5YLR026C YEL009C-AA0A023PZF2 135 aa2.23□□□□□ -2.05
SED5YLR026C HSP30P25619 332 aa2.23□□□□□ -2.05
SED5YLR026C CAF4P36130 643 aa2.23□□□□□ -2.05
SED5YLR026C MRH4P53166 561 aa2.23□□□□□ -2.05
SED5YLR026C RCF2P53721 224 aa2.23□□□□□ -2.05
SED5YLR026C YDR102CQ03864 110 aa2.23□□□□□ -2.05
SED5YLR026C PRP11Q07350 266 aaPredicted RBP2.23□□□□□ -2.05
SED5YLR026C BTS1Q12051 335 aa2.23□□□□□ -2.05
SED5YLR026C APA2P22108 325 aa2.22□□□□□ -2.05
SED5YLR026C DPB2P24482 689 aaPredicted RBP2.22□□□□□ -2.05
SED5YLR026C JEN1P36035 616 aa2.22□□□□□ -2.05
SED5YLR026C CTR2P38865 189 aa2.22□□□□□ -2.05
SED5YLR026C RRN5Q02983 363 aa2.22□□□□□ -2.05
SED5YLR026C FMN1Q03778 218 aa2.22□□□□□ -2.05
SED5YLR026C BRX1Q08235 291 aaKnown RBP2.22□□□□□ -2.05
SED5YLR026C YHR214C-EQ8TGK0 99 aa2.22□□□□□ -2.05
SED5YLR026C RPL39P04650 51 aa2.21□□□□□ -2.06
SED5YLR026C TCA17P32613 152 aa2.21□□□□□ -2.06
SED5YLR026C TEM1P38987 245 aa2.21□□□□□ -2.06
SED5YLR026C FCY21P40039 528 aa2.21□□□□□ -2.06
SED5YLR026C BNA6P43619 295 aa2.21□□□□□ -2.06
SED5YLR026C BRR6P53062 197 aa2.21□□□□□ -2.06
SED5YLR026C SLX9P53251 210 aaPredicted RBP2.21□□□□□ -2.06
SED5YLR026C PET191Q02772 108 aa2.21□□□□□ -2.06
SED5YLR026C VPS71Q03433 280 aa2.21□□□□□ -2.06
SED5YLR026C KRE28Q04431 385 aa2.21□□□□□ -2.06
SED5YLR026C ATG38Q05789 226 aaKnown RBP2.21□□□□□ -2.06
SED5YLR026C SAS5Q99314 248 aa2.21□□□□□ -2.06
SED5YLR026C CDC8P00572 216 aa2.2□□□□□ -2.06
SED5YLR026C MER1P16523 270 aa2.2□□□□□ -2.06
SED5YLR026C PET9P18239 318 aaKnown RBP2.2□□□□□ -2.06
SED5YLR026C MRPS28P21771 286 aa2.2□□□□□ -2.06
SED5YLR026C SEC22P22214 214 aa2.2□□□□□ -2.06
SED5YLR026C FLX1P40464 311 aa2.2□□□□□ -2.06
SED5YLR026C GON7P46984 123 aa2.2□□□□□ -2.06
SED5YLR026C YJL027CP47063 138 aaPredicted RBP2.2□□□□□ -2.06
SED5YLR026C LIA1P47120 325 aaKnown RBP2.2□□□□□ -2.06
SED5YLR026C NIF3P53081 288 aa2.2□□□□□ -2.06
SED5YLR026C GEP7P53171 287 aa2.2□□□□□ -2.06
SED5YLR026C YNL010WP53981 241 aaKnown RBP2.2□□□□□ -2.06
SED5YLR026C JLP1Q12358 412 aa2.2□□□□□ -2.06
SED5YLR026C YOR343CQ12484 108 aa2.2□□□□□ -2.06
SED5YLR026C YHR139C-AO13536 103 aa2.19□□□□□ -2.06
SED5YLR026C ADH3P07246 375 aaKnown RBP2.19□□□□□ -2.06
SED5YLR026C YPK2P18961 677 aa2.19□□□□□ -2.06
SED5YLR026C RNA15P25299 296 aaPredicted RBP2.19□□□□□ -2.06
SED5YLR026C PTC1P35182 281 aa2.19□□□□□ -2.06
SED5YLR026C YRA2P36036 203 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
SED5YLR026C YJL016WP47072 561 aa2.19□□□□□ -2.06
SED5YLR026C NSA1P53136 463 aaPredicted RBP2.19□□□□□ -2.06
SED5YLR026C ASI3P53983 676 aa2.19□□□□□ -2.06
SED5YLR026C PEX10Q05568 337 aa2.19□□□□□ -2.06
SED5YLR026C ATG17Q06410 417 aa2.19□□□□□ -2.06
SED5YLR026C DSF1P0CX08 502 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 58.4 ms