RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C SCO1P23833 295 aa5.02□□□□□ -1.61
SSK1YLR006C LDS1P31379 325 aa5.02□□□□□ -1.61
SSK1YLR006C QRI5P32344 111 aa5.02□□□□□ -1.61
SSK1YLR006C YGP1P38616 354 aaKnown RBP5.02□□□□□ -1.61
SSK1YLR006C AVT7P40501 490 aa5.02□□□□□ -1.61
SSK1YLR006C CFD1P40558 293 aa5.02□□□□□ -1.61
SSK1YLR006C SAS2P40963 338 aa5.02□□□□□ -1.61
SSK1YLR006C HNT1Q04344 158 aaKnown RBP5.02□□□□□ -1.61
SSK1YLR006C PRP11Q07350 266 aaPredicted RBP5.02□□□□□ -1.61
SSK1YLR006C UBI4P0CG63 381 aaKnown RBP5.01□□□□□ -1.61
SSK1YLR006C RPL40AP0CH08 128 aaKnown RBP5.01□□□□□ -1.61
SSK1YLR006C RPL40BP0CH09 128 aaKnown RBP5.01□□□□□ -1.61
SSK1YLR006C MRP49P32388 137 aa5.01□□□□□ -1.61
SSK1YLR006C MRPL28P36527 147 aa5.01□□□□□ -1.61
SSK1YLR006C POP8P38208 133 aa5.01□□□□□ -1.61
SSK1YLR006C YNL208WP40159 199 aaKnown RBP5.01□□□□□ -1.61
SSK1YLR006C IKS1P47042 667 aa5.01□□□□□ -1.61
SSK1YLR006C SDH7Q04401 133 aa5.01□□□□□ -1.61
SSK1YLR006C YCT1Q12235 531 aa5.01□□□□□ -1.61
SSK1YLR006C FAB1P34756 2278 aa5.01□□□□□ -1.61
SSK1YLR006C FCY2P17064 533 aa5□□□□□ -1.61
SSK1YLR006C GPX1P36014 167 aa5□□□□□ -1.61
SSK1YLR006C MRPL15P36523 253 aa5□□□□□ -1.61
SSK1YLR006C MRPL27P36526 146 aaPredicted RBP5□□□□□ -1.61
SSK1YLR006C YHR180WP38868 163 aa5□□□□□ -1.61
SSK1YLR006C TIF34P40217 347 aaKnown RBP5□□□□□ -1.61
SSK1YLR006C NSE4P43124 402 aa5□□□□□ -1.61
SSK1YLR006C BUL1P48524 976 aa5□□□□□ -1.61
SSK1YLR006C TOS8P53147 276 aa5□□□□□ -1.61
SSK1YLR006C YIF1P53845 314 aaKnown RBP5□□□□□ -1.61
SSK1YLR006C TEX1P53851 422 aaKnown RBP5□□□□□ -1.61
SSK1YLR006C FMP41P53889 259 aaKnown RBP5□□□□□ -1.61
SSK1YLR006C SMX3P54999 86 aaPredicted RBP5□□□□□ -1.61
SSK1YLR006C MAP1Q01662 387 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
SSK1YLR006C YML018CQ03730 393 aa5□□□□□ -1.61
SSK1YLR006C ATG39Q06159 398 aa5□□□□□ -1.61
SSK1YLR006C YLR146W-AQ2V2P1 62 aa5□□□□□ -1.61
SSK1YLR006C SAL1D6W196 494 aa5□□□□□ -1.61
SSK1YLR006C ERS1P17261 260 aa5□□□□□ -1.61
SSK1YLR006C TRS65P32893 560 aa5□□□□□ -1.61
SSK1YLR006C SNC2P33328 115 aa5□□□□□ -1.61
SSK1YLR006C DLS1P40366 167 aa5□□□□□ -1.61
SSK1YLR006C EMC5P40540 141 aa5□□□□□ -1.61
SSK1YLR006C TRM9P49957 279 aa5□□□□□ -1.61
SSK1YLR006C SCW4P53334 386 aaKnown RBP5□□□□□ -1.61
SSK1YLR006C DAD3P69850 94 aa5□□□□□ -1.61
SSK1YLR006C PET191Q02772 108 aa5□□□□□ -1.61
SSK1YLR006C NCE101Q02820 53 aa5□□□□□ -1.61
SSK1YLR006C YLR179CQ06252 201 aaKnown RBP5□□□□□ -1.61
SSK1YLR006C IRC13Q08630 104 aa5□□□□□ -1.61
SSK1YLR006C COX1P00401 534 aa4.99□□□□□ -1.61
SSK1YLR006C FMT1P32785 401 aa4.99□□□□□ -1.61
SSK1YLR006C SWD2P36104 329 aaPredicted RBP4.99□□□□□ -1.61
SSK1YLR006C YIL024CP40543 189 aa4.99□□□□□ -1.61
SSK1YLR006C HHO1P53551 258 aa4.99□□□□□ -1.61
SSK1YLR006C YPR174CQ06616 221 aaPredicted RBP4.99□□□□□ -1.61
SSK1YLR006C COQ10Q08058 207 aa4.99□□□□□ -1.61
SSK1YLR006C MCH4Q08268 501 aa4.99□□□□□ -1.61
SSK1YLR006C CYR1P08678 2026 aaKnown RBP4.99□□□□□ -1.61
SSK1YLR006C TAO3P40468 2376 aa4.99□□□□□ -1.61
SSK1YLR006C YSF3P0C074 85 aaPredicted RBP4.99□□□□□ -1.61
SSK1YLR006C CUE1P38428 203 aa4.99□□□□□ -1.61
SSK1YLR006C YFR054CP43622 192 aa4.99□□□□□ -1.61
SSK1YLR006C YIP1P53039 248 aa4.99□□□□□ -1.61
SSK1YLR006C PDR17P53844 350 aa4.99□□□□□ -1.61
SSK1YLR006C YNL092WP53934 400 aa4.99□□□□□ -1.61
SSK1YLR006C YMR253CQ04835 414 aa4.99□□□□□ -1.61
SSK1YLR006C RPL31AP0C2H8 113 aaKnown RBP4.98□□□□□ -1.61
SSK1YLR006C MRPL24P36525 258 aaPredicted RBP4.98□□□□□ -1.61
SSK1YLR006C RPL32P38061 130 aaKnown RBP4.98□□□□□ -1.61
SSK1YLR006C ECM33P38248 429 aaKnown RBP4.98□□□□□ -1.61
SSK1YLR006C OM14P38325 134 aa4.98□□□□□ -1.61
SSK1YLR006C ECM14P38836 430 aa4.98□□□□□ -1.61
SSK1YLR006C YNR014WP53719 212 aa4.98□□□□□ -1.61
SSK1YLR006C YDR209CQ03480 137 aa4.98□□□□□ -1.61
SSK1YLR006C CGI121Q03705 181 aaKnown RBP4.98□□□□□ -1.61
SSK1YLR006C YDL009CQ12210 107 aa4.98□□□□□ -1.61
SSK1YLR006C MRS1P07266 363 aa4.97□□□□□ -1.61
SSK1YLR006C SEC59P20048 519 aa4.97□□□□□ -1.61
SSK1YLR006C CDC50P25656 391 aa4.97□□□□□ -1.61
SSK1YLR006C RPF1P38805 295 aaKnown RBP4.97□□□□□ -1.61
SSK1YLR006C YER079WP40052 210 aaKnown RBP4.97□□□□□ -1.61
SSK1YLR006C GTT1P40582 234 aa4.97□□□□□ -1.61
SSK1YLR006C CIS3P47001 227 aa4.97□□□□□ -1.61
SSK1YLR006C CPD1P53314 239 aa4.97□□□□□ -1.61
SSK1YLR006C EST3Q03096 181 aa4.97□□□□□ -1.61
SSK1YLR006C TMA23Q03525 211 aa4.97□□□□□ -1.61
SSK1YLR006C DIC1Q06143 298 aa4.97□□□□□ -1.61
SSK1YLR006C YPL229WQ99395 206 aa4.97□□□□□ -1.61
SSK1YLR006C INO2P26798 304 aa4.97□□□□□ -1.61
SSK1YLR006C CRZ1P53968 678 aa4.97□□□□□ -1.61
SSK1YLR006C APS2Q00381 147 aa4.97□□□□□ -1.61
SSK1YLR006C YDR387CQ04162 555 aa4.97□□□□□ -1.61
SSK1YLR006C SEI1Q06058 285 aa4.97□□□□□ -1.61
SSK1YLR006C SYM1Q06563 197 aa4.97□□□□□ -1.61
SSK1YLR006C MCH1Q07376 486 aa4.97□□□□□ -1.61
SSK1YLR006C YDL218WQ07629 317 aa4.97□□□□□ -1.61
SSK1YLR006C YOL024WQ08172 172 aa4.97□□□□□ -1.61
SSK1YLR006C YPL257WQ08974 193 aa4.97□□□□□ -1.61
SSK1YLR006C DGK1Q12382 290 aa4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 53.6 ms