RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C RPL13BP40212 199 aaKnown RBP9.24□□□□□ -0.93
YKR040CYKR040C DFG10P40526 253 aa9.24□□□□□ -0.93
YKR040CYKR040C RPA43P46669 326 aa9.24□□□□□ -0.93
YKR040CYKR040C MSO1P53604 210 aaKnown RBP9.24□□□□□ -0.93
YKR040CYKR040C EST3Q03096 181 aa9.24□□□□□ -0.93
YKR040CYKR040C RPL13AQ12690 199 aaPredicted RBP9.24□□□□□ -0.93
YKR040CYKR040C TRP4P07285 380 aaPredicted RBP9.23□□□□□ -0.93
YKR040CYKR040C ERV1P27882 189 aa9.23□□□□□ -0.93
YKR040CYKR040C YGR050CP53231 118 aa9.23□□□□□ -0.93
YKR040CYKR040C PBP4Q07362 185 aaKnown RBP9.23□□□□□ -0.93
YKR040CYKR040C MRS4P23500 304 aa9.22□□□□□ -0.93
YKR040CYKR040C YKL162CP36052 402 aa9.22□□□□□ -0.93
YKR040CYKR040C RRF1P38771 230 aa9.22□□□□□ -0.93
YKR040CYKR040C YIF1P53845 314 aaKnown RBP9.22□□□□□ -0.93
YKR040CYKR040C YLR224WQ05947 369 aa9.22□□□□□ -0.93
YKR040CYKR040C LAS17Q12446 633 aa9.22□□□□□ -0.93
YKR040CYKR040C STF2P16965 84 aa9.21□□□□□ -0.94
YKR040CYKR040C COX15P40086 486 aa9.21□□□□□ -0.94
YKR040CYKR040C TOS8P53147 276 aa9.21□□□□□ -0.94
YKR040CYKR040C GPI15P53961 229 aa9.21□□□□□ -0.94
YKR040CYKR040C DYN2Q02647 92 aa9.21□□□□□ -0.94
YKR040CYKR040C SOD1P00445 154 aaKnown RBP9.2□□□□□ -0.94
YKR040CYKR040C SAR1P20606 190 aaKnown RBP9.2□□□□□ -0.94
YKR040CYKR040C TIP1P27654 210 aaPredicted RBP9.2□□□□□ -0.94
YKR040CYKR040C YPS1P32329 569 aa9.2□□□□□ -0.94
YKR040CYKR040C RTC3P38804 111 aaPredicted RBP9.2□□□□□ -0.94
YKR040CYKR040C ERG25P53045 309 aa9.2□□□□□ -0.94
YKR040CYKR040C RRT7Q07829 113 aa9.2□□□□□ -0.94
YKR040CYKR040C PRM3Q08931 133 aa9.2□□□□□ -0.94
YKR040CYKR040C RAD28Q12021 506 aa9.2□□□□□ -0.94
YKR040CYKR040C YHR212W-AP0CX91 67 aa9.19□□□□□ -0.94
YKR040CYKR040C MIG1P27705 504 aa9.19□□□□□ -0.94
YKR040CYKR040C PPQ1P32945 549 aa9.19□□□□□ -0.94
YKR040CYKR040C NSA2P40078 261 aaKnown RBP9.19□□□□□ -0.94
YKR040CYKR040C YMR090WQ04304 227 aaKnown RBP9.19□□□□□ -0.94
YKR040CYKR040C IRC23Q08416 157 aa9.19□□□□□ -0.94
YKR040CYKR040C AIM45Q12480 344 aaKnown RBP9.19□□□□□ -0.94
YKR040CYKR040C YLR146W-AQ2V2P1 62 aa9.19□□□□□ -0.94
YKR040CYKR040C ISN1Q99312 450 aa9.18□□□□□ -0.94
YKR040CYKR040C MSN1P22148 382 aa9.17□□□□□ -0.94
YKR040CYKR040C SEC22P22214 214 aa9.17□□□□□ -0.94
YKR040CYKR040C PKP2P53170 491 aa9.17□□□□□ -0.94
YKR040CYKR040C YPL264CQ08980 353 aa9.17□□□□□ -0.94
YKR040CYKR040C YPS3Q12303 508 aa9.17□□□□□ -0.94
YKR040CYKR040C COA2Q3E823 68 aa9.17□□□□□ -0.94
YKR040CYKR040C GRX2P17695 143 aaKnown RBP9.16□□□□□ -0.94
YKR040CYKR040C ACB1P31787 87 aa9.16□□□□□ -0.94
YKR040CYKR040C YGR219WP53307 113 aa9.16□□□□□ -0.94
YKR040CYKR040C CPD1P53314 239 aa9.16□□□□□ -0.94
YKR040CYKR040C CAB4P53332 305 aa9.16□□□□□ -0.94
YKR040CYKR040C YMR181CQ03231 154 aa9.16□□□□□ -0.94
YKR040CYKR040C WSS1P38838 269 aa9.15□□□□□ -0.94
YKR040CYKR040C YEA6P39953 335 aa9.15□□□□□ -0.94
YKR040CYKR040C HCH1P53834 153 aa9.15□□□□□ -0.94
YKR040CYKR040C PDR17P53844 350 aa9.15□□□□□ -0.94
YKR040CYKR040C DCS1Q06151 350 aa9.15□□□□□ -0.94
YKR040CYKR040C TDH1P00360 332 aaKnown RBP9.14□□□□□ -0.95
YKR040CYKR040C MRS3P10566 314 aa9.14□□□□□ -0.95
YKR040CYKR040C CKS1P20486 150 aaKnown RBP9.14□□□□□ -0.95
YKR040CYKR040C PDC2P32896 925 aa9.14□□□□□ -0.95
YKR040CYKR040C SLM6P38343 150 aa9.14□□□□□ -0.95
YKR040CYKR040C DOG2P38773 246 aa9.14□□□□□ -0.95
YKR040CYKR040C DOG1P38774 246 aa9.14□□□□□ -0.95
YKR040CYKR040C YAR068WP39564 161 aa9.14□□□□□ -0.95
YKR040CYKR040C SWT21P53873 357 aaPredicted RBP9.14□□□□□ -0.95
YKR040CYKR040C ACT1P60010 375 aaKnown RBP9.14□□□□□ -0.95
YKR040CYKR040C DID2P69771 204 aa9.14□□□□□ -0.95
YKR040CYKR040C VPS71Q03433 280 aa9.14□□□□□ -0.95
YKR040CYKR040C YHP1Q04116 353 aa9.14□□□□□ -0.95
YKR040CYKR040C ERP1Q05359 219 aaKnown RBP9.14□□□□□ -0.95
YKR040CYKR040C FRQ1Q06389 190 aa9.14□□□□□ -0.95
YKR040CYKR040C FCY2P17064 533 aa9.13□□□□□ -0.95
YKR040CYKR040C YBR144CP34215 104 aa9.13□□□□□ -0.95
YKR040CYKR040C PNC1P53184 216 aaKnown RBP9.13□□□□□ -0.95
YKR040CYKR040C TIM44Q01852 431 aa9.13□□□□□ -0.95
YKR040CYKR040C PET494P07390 489 aaPredicted RBP9.12□□□□□ -0.95
YKR040CYKR040C CDS1P38221 457 aa9.12□□□□□ -0.95
YKR040CYKR040C MIC12P38341 106 aa9.12□□□□□ -0.95
YKR040CYKR040C BOL3P39724 118 aa9.12□□□□□ -0.95
YKR040CYKR040C YJR111CP47148 283 aaKnown RBP9.12□□□□□ -0.95
YKR040CYKR040C POC4Q12245 148 aaPredicted RBP9.12□□□□□ -0.95
YKR040CYKR040C PAA1Q12447 191 aaKnown RBP9.12□□□□□ -0.95
YKR040CYKR040C YBL071CP38185 102 aa9.11□□□□□ -0.95
YKR040CYKR040C YNL194CP40169 301 aa9.11□□□□□ -0.95
YKR040CYKR040C SYG1P40528 902 aa9.11□□□□□ -0.95
YKR040CYKR040C HXT14P42833 540 aa9.11□□□□□ -0.95
YKR040CYKR040C RXT3Q07458 294 aa9.11□□□□□ -0.95
YKR040CYKR040C YHR213W-AQ8TGT4 77 aa9.11□□□□□ -0.95
YKR040CYKR040C RRT1P38192 103 aa9.1□□□□□ -0.95
YKR040CYKR040C AGX1P43567 385 aa9.1□□□□□ -0.95
YKR040CYKR040C USV1Q12132 391 aa9.1□□□□□ -0.95
YKR040CYKR040C RPS25BP0C0T4 108 aaKnown RBP9.09□□□□□ -0.95
YKR040CYKR040C IMD2P38697 523 aaKnown RBP9.09□□□□□ -0.95
YKR040CYKR040C YER137CP40083 148 aaKnown RBP9.09□□□□□ -0.95
YKR040CYKR040C COX18P53239 316 aa9.09□□□□□ -0.95
YKR040CYKR040C YAP1802P53309 568 aa9.09□□□□□ -0.95
YKR040CYKR040C YMR082CQ04276 118 aa9.09□□□□□ -0.95
YKR040CYKR040C AGC1Q12482 902 aa9.09□□□□□ -0.95
YKR040CYKR040C RPS25AQ3E792 108 aaPredicted RBP9.09□□□□□ -0.95
YKR040CYKR040C MAG1P22134 296 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 154.5 ms