RNA–Protein interactions for RNA: YKR029C

SET3, Transcript of Defining member of the SET3 histone deacetylase complex, yeast

Gene SET3, Length 2,256 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SET3	YKR029C	MRPS17	Q03246	237 aa	Predicted RBP	0.75	□□□□□ -2.29
SET3	YKR029C	ARR2	Q06597	130 aa		0.75	□□□□□ -2.29
SET3	YKR029C	PSF1	Q12488	208 aa		0.75	□□□□□ -2.29
SET3	YKR029C	TDA8	Q6B2U8	126 aa		0.75	□□□□□ -2.29
SET3	YKR029C	YPL229W	Q99395	206 aa		0.75	□□□□□ -2.29
SET3	YKR029C	MSB2	P32334	1306 aa		0.75	□□□□□ -2.29
SET3	YKR029C	YHR139C-A	O13536	103 aa		0.75	□□□□□ -2.29
SET3	YKR029C	RPL25	P04456	142 aa	Known RBP	0.75	□□□□□ -2.29
SET3	YKR029C	ARG80	P07249	177 aa		0.75	□□□□□ -2.29
SET3	YKR029C	MDH2	P22133	377 aa		0.75	□□□□□ -2.29
SET3	YKR029C	PTM1	P32857	523 aa		0.75	□□□□□ -2.29
SET3	YKR029C	SRY1	P36007	326 aa		0.75	□□□□□ -2.29
SET3	YKR029C	SIP3	P38717	1229 aa		0.75	□□□□□ -2.29
SET3	YKR029C	CTR2	P38865	189 aa		0.75	□□□□□ -2.29
SET3	YKR029C	IKI1	P38874	309 aa		0.75	□□□□□ -2.29
SET3	YKR029C	IRC22	P40006	225 aa		0.75	□□□□□ -2.29
SET3	YKR029C	PEP8	P40335	379 aa		0.75	□□□□□ -2.29
SET3	YKR029C	MOB1	P40484	314 aa		0.75	□□□□□ -2.29
SET3	YKR029C	ICE2	P40499	491 aa		0.75	□□□□□ -2.29
SET3	YKR029C	YFH7	P43591	353 aa		0.75	□□□□□ -2.29
SET3	YKR029C	CYT2	Q00873	224 aa		0.75	□□□□□ -2.29
SET3	YKR029C	YMR321C	Q04898	105 aa		0.75	□□□□□ -2.29
SET3	YKR029C	YHR086W-A	Q3E746	53 aa		0.75	□□□□□ -2.29
SET3	YKR029C	IKI3	Q06706	1349 aa	Known RBP	0.74	□□□□□ -2.29
SET3	YKR029C	YDR157W	A0A023PZE8	133 aa		0.74	□□□□□ -2.29
SET3	YKR029C	HTB1	P02293	131 aa	Known RBP	0.74	□□□□□ -2.29
SET3	YKR029C	HTB2	P02294	131 aa		0.74	□□□□□ -2.29
SET3	YKR029C	REP2	P03872	296 aa		0.74	□□□□□ -2.29
SET3	YKR029C	YLR156W	P0CE96	114 aa		0.74	□□□□□ -2.29
SET3	YKR029C	YLR159W	P0CE97	114 aa		0.74	□□□□□ -2.29
SET3	YKR029C	YLR161W	P0CE98	114 aa		0.74	□□□□□ -2.29
SET3	YKR029C	YHR022C	P38763	256 aa		0.74	□□□□□ -2.29
SET3	YKR029C	SVP26	P38869	228 aa		0.74	□□□□□ -2.29
SET3	YKR029C	AYR1	P40471	297 aa		0.74	□□□□□ -2.29
SET3	YKR029C	PRM10	P42946	383 aa		0.74	□□□□□ -2.29
SET3	YKR029C	GET1	P53192	235 aa		0.74	□□□□□ -2.29
SET3	YKR029C	CUS2	P53830	285 aa	Predicted RBP	0.74	□□□□□ -2.29
SET3	YKR029C	GAS3	Q03655	524 aa		0.74	□□□□□ -2.29
SET3	YKR029C	GET4	Q12125	312 aa		0.74	□□□□□ -2.29
SET3	YKR029C	ADF1	Q2V2Q1	113 aa		0.74	□□□□□ -2.29
SET3	YKR029C	TSC3	Q3E790	80 aa		0.74	□□□□□ -2.29
SET3	YKR029C	ECM29	P38737	1868 aa		0.74	□□□□□ -2.29
SET3	YKR029C	RPL27A	P0C2H6	136 aa	Known RBP	0.73	□□□□□ -2.29
SET3	YKR029C	RPL27B	P0C2H7	136 aa	Known RBP	0.73	□□□□□ -2.29
SET3	YKR029C	URA5	P13298	226 aa	Known RBP	0.73	□□□□□ -2.29
SET3	YKR029C	CBF1	P17106	351 aa		0.73	□□□□□ -2.29
SET3	YKR029C	PET9	P18239	318 aa	Known RBP	0.73	□□□□□ -2.29
SET3	YKR029C	MAG1	P22134	296 aa	Known RBP	0.73	□□□□□ -2.29
SET3	YKR029C	MEI4	P29467	408 aa		0.73	□□□□□ -2.29
SET3	YKR029C	TCA17	P32613	152 aa		0.73	□□□□□ -2.29
SET3	YKR029C	SNC2	P33328	115 aa		0.73	□□□□□ -2.29
SET3	YKR029C	YET1	P35723	206 aa		0.73	□□□□□ -2.29
SET3	YKR029C	YCR087C-A	P37263	153 aa		0.73	□□□□□ -2.29
SET3	YKR029C	DSE2	P38844	325 aa		0.73	□□□□□ -2.29
SET3	YKR029C	BMT5	P40493	336 aa		0.73	□□□□□ -2.29
SET3	YKR029C	YNR062C	P53748	327 aa		0.73	□□□□□ -2.29
SET3	YKR029C	SWP1	Q02795	286 aa		0.73	□□□□□ -2.29
SET3	YKR029C	TRM12	Q04235	462 aa		0.73	□□□□□ -2.29
SET3	YKR029C	CDC7	P06243	507 aa		0.73	□□□□□ -2.29
SET3	YKR029C	MATALPHA2	P0CY08	210 aa		0.73	□□□□□ -2.29
SET3	YKR029C	HMLALPHA2	P0CY09	210 aa		0.73	□□□□□ -2.29
SET3	YKR029C	KSS1	P14681	368 aa		0.73	□□□□□ -2.29
SET3	YKR029C	CKS1	P20486	150 aa	Known RBP	0.73	□□□□□ -2.29
SET3	YKR029C	BET1	P22804	142 aa		0.73	□□□□□ -2.29
SET3	YKR029C	SPS18	P32572	300 aa		0.73	□□□□□ -2.29
SET3	YKR029C	UMP1	P38293	148 aa		0.73	□□□□□ -2.29
SET3	YKR029C	FCY21	P40039	528 aa		0.73	□□□□□ -2.29
SET3	YKR029C	YNL217W	P40152	326 aa		0.73	□□□□□ -2.29
SET3	YKR029C	AGE2	P40529	298 aa		0.73	□□□□□ -2.29
SET3	YKR029C	TIR3	P40552	269 aa		0.73	□□□□□ -2.29
SET3	YKR029C	LSM7	P53905	115 aa	Known RBP	0.73	□□□□□ -2.29
SET3	YKR029C	BUD25	P85052	153 aa		0.73	□□□□□ -2.29
SET3	YKR029C	ABP140	Q08641	628 aa	Known RBP	0.73	□□□□□ -2.29
SET3	YKR029C	YPL162C	Q12042	273 aa		0.73	□□□□□ -2.29
SET3	YKR029C	TIM9	O74700	87 aa		0.72	□□□□□ -2.29
SET3	YKR029C	SEC4	P07560	215 aa	Known RBP	0.72	□□□□□ -2.29
SET3	YKR029C	RPL43A	P0CX25	92 aa	Known RBP	0.72	□□□□□ -2.29
SET3	YKR029C	RPL43B	P0CX26	92 aa		0.72	□□□□□ -2.29
SET3	YKR029C	MER1	P16523	270 aa		0.72	□□□□□ -2.29
SET3	YKR029C	YCL042W	P25572	119 aa		0.72	□□□□□ -2.29
SET3	YKR029C	PEX34	P25584	144 aa		0.72	□□□□□ -2.29
SET3	YKR029C	RFA3	P26755	122 aa	Known RBP	0.72	□□□□□ -2.29
SET3	YKR029C	SEC17	P32602	292 aa		0.72	□□□□□ -2.29
SET3	YKR029C	TAF14	P35189	244 aa		0.72	□□□□□ -2.29
SET3	YKR029C	MRPL17	P36528	281 aa		0.72	□□□□□ -2.29
SET3	YKR029C	HMF1	P40037	129 aa	Known RBP	0.72	□□□□□ -2.29
SET3	YKR029C	YFR054C	P43622	192 aa		0.72	□□□□□ -2.29
SET3	YKR029C	BAT2	P47176	376 aa	Known RBP	0.72	□□□□□ -2.29
SET3	YKR029C	SAY1	P53324	424 aa		0.72	□□□□□ -2.29
SET3	YKR029C	MEC1	P38111	2368 aa		0.72	□□□□□ -2.29
SET3	YKR029C	DDI2	P0CH63	225 aa		0.72	□□□□□ -2.29
SET3	YKR029C	DDI3	P0CH64	225 aa		0.72	□□□□□ -2.29
SET3	YKR029C	FZF1	P32805	299 aa		0.72	□□□□□ -2.29
SET3	YKR029C	UTP30	P36144	274 aa	Known RBP	0.72	□□□□□ -2.29
SET3	YKR029C	AIM2	P39721	246 aa		0.72	□□□□□ -2.29
SET3	YKR029C	AVT2	P39981	480 aa		0.72	□□□□□ -2.29
SET3	YKR029C	YRB2	P40517	327 aa		0.72	□□□□□ -2.29
SET3	YKR029C	GVP36	P40531	326 aa	Known RBP	0.72	□□□□□ -2.29
SET3	YKR029C	YGR050C	P53231	118 aa		0.72	□□□□□ -2.29
SET3	YKR029C	COG5	P53951	403 aa		0.72	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms