RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C ODC2Q99297 307 aa1.6□□□□□ -2.15
YPT52YKR014C YCF1P39109 1515 aaKnown RBP1.6□□□□□ -2.15
YPT52YKR014C SCC2Q04002 1493 aa1.59□□□□□ -2.15
YPT52YKR014C MDH2P22133 377 aa1.59□□□□□ -2.15
YPT52YKR014C YER034WP40022 185 aaKnown RBP1.59□□□□□ -2.15
YPT52YKR014C SER2P42941 309 aa1.59□□□□□ -2.15
YPT52YKR014C TMA22P47089 198 aaPredicted RBP1.59□□□□□ -2.15
YPT52YKR014C YJR111CP47148 283 aaKnown RBP1.59□□□□□ -2.15
YPT52YKR014C NUP49Q02199 472 aa1.59□□□□□ -2.15
YPT52YKR014C CMC2Q3E7A4 109 aa1.59□□□□□ -2.15
YPT52YKR014C ATG40Q99325 256 aa1.59□□□□□ -2.15
YPT52YKR014C CPA1P07258 411 aaKnown RBP1.58□□□□□ -2.16
YPT52YKR014C RPS24AP0CX31 135 aaKnown RBP1.58□□□□□ -2.16
YPT52YKR014C RPS24BP0CX32 135 aaKnown RBP1.58□□□□□ -2.16
YPT52YKR014C KDX1P36005 433 aa1.58□□□□□ -2.16
YPT52YKR014C SHE2P36068 246 aaKnown RBP RIP-Chip data1.58□□□□□ -2.16not detected
YPT52YKR014C SRP14P38985 146 aa1.58□□□□□ -2.16
YPT52YKR014C AVT2P39981 480 aa1.58□□□□□ -2.16
YPT52YKR014C YEA4P40004 342 aa1.58□□□□□ -2.16
YPT52YKR014C YER134CP40081 178 aa1.58□□□□□ -2.16
YPT52YKR014C AIM34Q03673 198 aa1.58□□□□□ -2.16
YPT52YKR014C GIM5Q04493 163 aa1.58□□□□□ -2.16
YPT52YKR014C DYN3Q04949 312 aa1.58□□□□□ -2.16
YPT52YKR014C SML1Q04964 104 aa1.58□□□□□ -2.16
YPT52YKR014C BRX1Q08235 291 aaKnown RBP1.58□□□□□ -2.16
YPT52YKR014C YPR014CQ6B0W2 109 aa1.58□□□□□ -2.16
YPT52YKR014C CDC25P04821 1589 aa1.58□□□□□ -2.16
YPT52YKR014C NTE1Q04958 1679 aa1.58□□□□□ -2.16
YPT52YKR014C RPO31P04051 1460 aa1.57□□□□□ -2.16
YPT52YKR014C RPL35AP0CX84 120 aaKnown RBP1.57□□□□□ -2.16
YPT52YKR014C RPL35BP0CX85 120 aaKnown RBP1.57□□□□□ -2.16
YPT52YKR014C VPS51P36116 164 aa1.57□□□□□ -2.16
YPT52YKR014C FMP23P38231 175 aa1.57□□□□□ -2.16
YPT52YKR014C FMP32P43557 207 aa1.57□□□□□ -2.16
YPT52YKR014C SAY1P53324 424 aa1.57□□□□□ -2.16
YPT52YKR014C YIP3P53633 176 aa1.57□□□□□ -2.16
YPT52YKR014C YLR460CP54007 376 aa1.57□□□□□ -2.16
YPT52YKR014C BUD25P85052 153 aa1.57□□□□□ -2.16
YPT52YKR014C YOL014WQ08110 124 aa1.57□□□□□ -2.16
YPT52YKR014C YML100W-AQ8TGT0 57 aa1.57□□□□□ -2.16
YPT52YKR014C ESC1Q03661 1658 aaKnown RBP1.57□□□□□ -2.16
YPT52YKR014C SKI3P17883 1432 aaKnown RBP1.57□□□□□ -2.16
YPT52YKR014C POL1P13382 1468 aa1.56□□□□□ -2.16
YPT52YKR014C RKR1Q04781 1562 aa1.56□□□□□ -2.16
YPT52YKR014C YAR023CD6VPM8 179 aa1.56□□□□□ -2.16
YPT52YKR014C POR1P04840 283 aaKnown RBP1.56□□□□□ -2.16
YPT52YKR014C YOL162WP0CF19 215 aa1.56□□□□□ -2.16
YPT52YKR014C MGT1P26188 188 aa1.56□□□□□ -2.16
YPT52YKR014C YKR041WP36134 250 aa1.56□□□□□ -2.16
YPT52YKR014C YBR209WP38311 105 aa1.56□□□□□ -2.16
YPT52YKR014C NVJ1P38881 321 aa1.56□□□□□ -2.16
YPT52YKR014C GAA1P39012 614 aa1.56□□□□□ -2.16
YPT52YKR014C MTW1P39731 289 aa1.56□□□□□ -2.16
YPT52YKR014C YER076CP40049 302 aa1.56□□□□□ -2.16
YPT52YKR014C TDA4P47153 279 aa1.56□□□□□ -2.16
YPT52YKR014C SHH4Q06236 168 aa1.56□□□□□ -2.16
YPT52YKR014C YOR342CQ12182 319 aa1.56□□□□□ -2.16
YPT52YKR014C TY2B-LR1P0C2J3 1770 aa1.56□□□□□ -2.16
YPT52YKR014C TY2B-FP0CX63 1770 aa1.56□□□□□ -2.16
YPT52YKR014C TY2B-GR2P0CX64 1770 aa1.56□□□□□ -2.16
YPT52YKR014C TY2B-CP25384 1770 aa1.56□□□□□ -2.16
YPT52YKR014C TY2B-DR2Q03494 1770 aa1.56□□□□□ -2.16
YPT52YKR014C TY1B-DR1Q03855 1755 aa1.56□□□□□ -2.16
YPT52YKR014C TY2B-DR3Q07791 1770 aaKnown RBP1.56□□□□□ -2.16
YPT52YKR014C TY2B-OR1Q12113 1770 aa1.56□□□□□ -2.16
YPT52YKR014C TY2B-DR1Q12472 1770 aa1.56□□□□□ -2.16
YPT52YKR014C TY2B-OR2Q12501 1770 aa1.56□□□□□ -2.16
YPT52YKR014C MYO4P32492 1471 aa1.56□□□□□ -2.16
YPT52YKR014C UFD4P33202 1483 aa1.56□□□□□ -2.16
YPT52YKR014C YOR1P53049 1477 aa1.56□□□□□ -2.16
YPT52YKR014C YLR236CA0A023PZG4 107 aa1.55□□□□□ -2.16
YPT52YKR014C SEC14P24280 304 aaKnown RBP1.55□□□□□ -2.16
YPT52YKR014C AHC2P25649 128 aa1.55□□□□□ -2.16
YPT52YKR014C TFC1P32367 649 aa1.55□□□□□ -2.16
YPT52YKR014C CLG1P35190 452 aa1.55□□□□□ -2.16
YPT52YKR014C MAK5P38112 773 aaPredicted RBP1.55□□□□□ -2.16
YPT52YKR014C TVP23P38962 199 aa1.55□□□□□ -2.16
YPT52YKR014C MPC3P53311 146 aa1.55□□□□□ -2.16
YPT52YKR014C YNL247WP53852 767 aaKnown RBP1.55□□□□□ -2.16
YPT52YKR014C PGA1P53896 198 aa1.55□□□□□ -2.16
YPT52YKR014C YMR099CQ03161 297 aaKnown RBP1.55□□□□□ -2.16
YPT52YKR014C YMR295CQ03559 197 aa1.55□□□□□ -2.16
YPT52YKR014C CUE4Q04201 117 aaPredicted RBP1.55□□□□□ -2.16
YPT52YKR014C YMR315WQ04869 349 aaKnown RBP1.55□□□□□ -2.16
YPT52YKR014C ANT1Q06497 328 aa1.55□□□□□ -2.16
YPT52YKR014C FLO9P39712 1322 aa1.55□□□□□ -2.16
YPT52YKR014C TOP2P06786 1428 aaKnown RBP1.55□□□□□ -2.16
YPT52YKR014C DNF1P32660 1571 aa1.55□□□□□ -2.16
YPT52YKR014C TY2B-BQ12491 1770 aa1.54□□□□□ -2.16
YPT52YKR014C TY1B-DR3Q99231 1755 aa1.54□□□□□ -2.16
YPT52YKR014C SPO13P23624 291 aa1.54□□□□□ -2.16
YPT52YKR014C RAD51P25454 400 aa1.54□□□□□ -2.16
YPT52YKR014C ARO7P32178 256 aa1.54□□□□□ -2.16
YPT52YKR014C ERJ5P43613 295 aaPredicted RBP1.54□□□□□ -2.16
YPT52YKR014C JAC1P53193 184 aa1.54□□□□□ -2.16
YPT52YKR014C HPT1Q04178 221 aaKnown RBP1.54□□□□□ -2.16
YPT52YKR014C MPD1Q12404 318 aaKnown RBP1.54□□□□□ -2.16
YPT52YKR014C PEX11Q12462 236 aa1.54□□□□□ -2.16
YPT52YKR014C SMC4Q12267 1418 aa1.54□□□□□ -2.16
YPT52YKR014C VTH1P40438 1549 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms