RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	CDC7	P06243	507 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	CNB1	P25296	175 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	VMA11	P32842	164 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	YJL027C	P47063	138 aa	Predicted RBP	3.14	□□□□□ -1.91
LOS1	YKL205W	RIB4	P50861	169 aa	Predicted RBP	3.14	□□□□□ -1.91
LOS1	YKL205W	RIM9	Q04734	239 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	YDR215C	Q12240	137 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	FMP16	Q12497	93 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	DDI2	P0CH63	225 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	DDI3	P0CH64	225 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	YCR022C	P25620	114 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	PAU15	P40585	124 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	YFL015C	P43578	164 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	RPL9B	P51401	191 aa	Known RBP	3.14	□□□□□ -1.91
LOS1	YKL205W	ISU1	Q03020	165 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	LPP1	Q04396	274 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	YOL118C	Q08259	102 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	FEX1	Q08913	375 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	FEX2	Q08991	375 aa		3.14	□□□□□ -1.91
LOS1	YKL205W	GCN1	P33892	2672 aa	Known RBP	3.14	□□□□□ -1.91
LOS1	YKL205W	MRPS9	P38120	278 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	ECM14	P38836	430 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	HSP10	P38910	106 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	YNR064C	P53750	290 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	PDR17	P53844	350 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	INN1	P53901	409 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	TMA23	Q03525	211 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	CYC3	P06182	269 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	SPS100	P13130	326 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	CDC39	P25655	2108 aa	Known RBP	3.13	□□□□□ -1.91
LOS1	YKL205W	DOG2	P38773	246 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	DOG1	P38774	246 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	NOP16	P40007	231 aa	Known RBP	3.13	□□□□□ -1.91
LOS1	YKL205W	PIC2	P40035	300 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	CYB5	P40312	120 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	TAX4	P47030	604 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	YOP1	Q12402	180 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	YOR192C-C	Q3E736	78 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	RPL39	P04650	51 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	PHO85	P17157	305 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	SAR1	P20606	190 aa	Known RBP	3.13	□□□□□ -1.91
LOS1	YKL205W	RPB9	P27999	122 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	PDC2	P32896	925 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	YBL059W	P34224	193 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	TRS20	P38334	175 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	GPI2	P46961	280 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	ATP19	P81451	68 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	YCL048W-A	Q2V2Q2	79 aa		3.13	□□□□□ -1.91
LOS1	YKL205W	COX2	P00410	251 aa		3.12	□□□□□ -1.91
LOS1	YKL205W	PEX7	P39108	375 aa		3.12	□□□□□ -1.91
LOS1	YKL205W	TAD2	P47058	250 aa		3.12	□□□□□ -1.91
LOS1	YKL205W	PHO23	P50947	330 aa		3.12	□□□□□ -1.91
LOS1	YKL205W	COX18	P53239	316 aa		3.12	□□□□□ -1.91
LOS1	YKL205W	YNR066C	P53752	436 aa		3.12	□□□□□ -1.91
LOS1	YKL205W	FSH2	Q05015	223 aa		3.12	□□□□□ -1.91
LOS1	YKL205W	MRPL23	Q12487	163 aa	Predicted RBP	3.12	□□□□□ -1.91
LOS1	YKL205W	TFB5	Q3E7C1	72 aa	Predicted RBP	3.12	□□□□□ -1.91
LOS1	YKL205W	HTB1	P02293	131 aa	Known RBP	3.12	□□□□□ -1.91
LOS1	YKL205W	PRS4	P38063	326 aa	Predicted RBP	3.12	□□□□□ -1.91
LOS1	YKL205W	TIM21	P53220	239 aa		3.12	□□□□□ -1.91
LOS1	YKL205W	WSC2	P53832	503 aa		3.12	□□□□□ -1.91
LOS1	YKL205W	MRX11	Q03079	207 aa		3.12	□□□□□ -1.91
LOS1	YKL205W	EAF3	Q12432	401 aa		3.12	□□□□□ -1.91
LOS1	YKL205W	LSM12	P38828	187 aa	Known RBP	3.11	□□□□□ -1.91
LOS1	YKL205W	SUR2	P38992	349 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	GLE2	P40066	365 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	DFG10	P40526	253 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	LST8	P41318	303 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	QRI1	P43123	477 aa	Known RBP	3.11	□□□□□ -1.91
LOS1	YKL205W	YGR045C	P53229	120 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	VPS28	Q02767	242 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	ADE8	P04161	214 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	GRX2	P17695	143 aa	Known RBP	3.11	□□□□□ -1.91
LOS1	YKL205W	ZRC1	P20107	442 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	YNK1	P36010	153 aa	Known RBP	3.11	□□□□□ -1.91
LOS1	YKL205W	YBL071C	P38185	102 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	ALG14	P38242	237 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	HST4	P53688	370 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	YPL077C	Q02831	240 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	YMR166C	Q03829	368 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	YDL242W	Q07746	117 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	CCW12	Q12127	133 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	MRS1	P07266	363 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	YHR213W	P0CI67	198 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	LAC1	P28496	418 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	NNK1	P36003	928 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	GLY1	P37303	387 aa	Known RBP	3.11	□□□□□ -1.91
LOS1	YKL205W	PET100	P38958	111 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	VMA7	P39111	118 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	YHC3	P47040	408 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	GNP1	P48813	663 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	TIM18	Q08749	192 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	YLR125W	Q12138	136 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	Q0142	Q9ZZW4	58 aa		3.11	□□□□□ -1.91
LOS1	YKL205W	SBA1	P28707	216 aa	Known RBP	3.1	□□□□□ -1.91
LOS1	YKL205W	ATP3	P38077	311 aa	Known RBP	3.1	□□□□□ -1.91
LOS1	YKL205W	YIR035C	P40579	254 aa		3.1	□□□□□ -1.91
LOS1	YKL205W	RTS2	P40962	232 aa		3.1	□□□□□ -1.91
LOS1	YKL205W	UBP8	P50102	471 aa		3.1	□□□□□ -1.91
LOS1	YKL205W	PAU4	P53427	120 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms