RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W KDX1P36005 433 aa3.2□□□□□ -1.9
SPC42YKL042W NRG2P38082 220 aa3.2□□□□□ -1.9
SPC42YKL042W AVT2P39981 480 aa3.2□□□□□ -1.9
SPC42YKL042W YER134CP40081 178 aa3.2□□□□□ -1.9
SPC42YKL042W AGE2P40529 298 aa3.2□□□□□ -1.9
SPC42YKL042W SMD2Q06217 110 aaKnown RBP3.2□□□□□ -1.9
SPC42YKL042W YML100W-AQ8TGT0 57 aa3.2□□□□□ -1.9
SPC42YKL042W DDI2P0CH63 225 aa3.19□□□□□ -1.9
SPC42YKL042W DDI3P0CH64 225 aa3.19□□□□□ -1.9
SPC42YKL042W ARO7P32178 256 aa3.19□□□□□ -1.9
SPC42YKL042W FCY21P40039 528 aa3.19□□□□□ -1.9
SPC42YKL042W TDA4P47153 279 aa3.19□□□□□ -1.9
SPC42YKL042W PGA1P53896 198 aa3.19□□□□□ -1.9
SPC42YKL042W YLR050CQ12155 161 aaKnown RBP3.19□□□□□ -1.9
SPC42YKL042W PEX11Q12462 236 aa3.19□□□□□ -1.9
SPC42YKL042W YHR086W-AQ3E746 53 aa3.19□□□□□ -1.9
SPC42YKL042W SHE2P36068 246 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
SPC42YKL042W YER121WP40076 114 aa3.18□□□□□ -1.9
SPC42YKL042W HPT1Q04178 221 aaKnown RBP3.18□□□□□ -1.9
SPC42YKL042W MPD1Q12404 318 aaKnown RBP3.18□□□□□ -1.9
SPC42YKL042W ATG40Q99325 256 aa3.18□□□□□ -1.9
SPC42YKL042W YAR023CD6VPM8 179 aa3.17□□□□□ -1.9
SPC42YKL042W POR1P04840 283 aaKnown RBP3.17□□□□□ -1.9
SPC42YKL042W DSE2P38844 325 aa3.17□□□□□ -1.9
SPC42YKL042W GPI17Q04080 534 aa3.17□□□□□ -1.9
SPC42YKL042W FZF1P32805 299 aa3.16□□□□□ -1.9
SPC42YKL042W YKL102CP34249 101 aa3.16□□□□□ -1.9
SPC42YKL042W FES1P38260 290 aa3.16□□□□□ -1.9
SPC42YKL042W MTW1P39731 289 aa3.16□□□□□ -1.9
SPC42YKL042W YMR099CQ03161 297 aaKnown RBP3.16□□□□□ -1.9
SPC42YKL042W YOR342CQ12182 319 aa3.16□□□□□ -1.9
SPC42YKL042W VTC1P40046 129 aaRIP-Chip data3.15□□□□□ -1.91not detected
SPC42YKL042W MPC3P53311 146 aa3.15□□□□□ -1.91
SPC42YKL042W BOL1Q3E793 110 aa3.15□□□□□ -1.91
SPC42YKL042W MET5P47169 1442 aa3.15□□□□□ -1.91
SPC42YKL042W TVP38P36164 337 aa3.14□□□□□ -1.91
SPC42YKL042W YBR209WP38311 105 aa3.14□□□□□ -1.91
SPC42YKL042W NSG1P38837 291 aa3.14□□□□□ -1.91
SPC42YKL042W GPI14P47088 403 aaKnown RBP3.14□□□□□ -1.91
SPC42YKL042W IGO1P53897 168 aa3.14□□□□□ -1.91
SPC42YKL042W NAT3Q06504 195 aa3.14□□□□□ -1.91
SPC42YKL042W QCR2P07257 368 aa3.13□□□□□ -1.91
SPC42YKL042W MDH2P22133 377 aa3.13□□□□□ -1.91
SPC42YKL042W GAA1P39012 614 aa3.13□□□□□ -1.91
SPC42YKL042W YFL019CP43576 117 aa3.13□□□□□ -1.91
SPC42YKL042W YMR295CQ03559 197 aa3.13□□□□□ -1.91
SPC42YKL042W PLP1Q04004 230 aa3.13□□□□□ -1.91
SPC42YKL042W SML1Q04964 104 aa3.13□□□□□ -1.91
SPC42YKL042W YLR236CA0A023PZG4 107 aa3.12□□□□□ -1.91
SPC42YKL042W PEP8P40335 379 aa3.12□□□□□ -1.91
SPC42YKL042W AYR1P40471 297 aa3.12□□□□□ -1.91
SPC42YKL042W SAY1P53324 424 aa3.12□□□□□ -1.91
SPC42YKL042W CMD1P06787 147 aaKnown RBP3.11□□□□□ -1.91
SPC42YKL042W SPO13P23624 291 aa3.11□□□□□ -1.91
SPC42YKL042W AME1P38313 324 aa3.11□□□□□ -1.91
SPC42YKL042W TVP23P38962 199 aa3.11□□□□□ -1.91
SPC42YKL042W VPS71Q03433 280 aa3.11□□□□□ -1.91
SPC42YKL042W YLR412C-AQ3E742 68 aa3.11□□□□□ -1.91
SPC42YKL042W RFC2P40348 353 aa3.1□□□□□ -1.91
SPC42YKL042W BUD25P85052 153 aa3.1□□□□□ -1.91
SPC42YKL042W CUE4Q04201 117 aaPredicted RBP3.1□□□□□ -1.91
SPC42YKL042W DGK1Q12382 290 aa3.1□□□□□ -1.91
SPC42YKL042W NSP1P14907 823 aaKnown RBP3.09□□□□□ -1.91
SPC42YKL042W TFC1P32367 649 aa3.09□□□□□ -1.91
SPC42YKL042W ERJ5P43613 295 aaPredicted RBP3.09□□□□□ -1.91
SPC42YKL042W YFR054CP43622 192 aa3.09□□□□□ -1.91
SPC42YKL042W TIR1P10863 254 aa3.07□□□□□ -1.92
SPC42YKL042W CUP9P41817 306 aa3.07□□□□□ -1.92
SPC42YKL042W KNH1P50112 268 aa3.07□□□□□ -1.92
SPC42YKL042W EFM5P53200 248 aaKnown RBP3.07□□□□□ -1.92
SPC42YKL042W POP3P53833 195 aaPredicted RBP3.07□□□□□ -1.92
SPC42YKL042W SHH3Q04487 196 aa3.07□□□□□ -1.92
SPC42YKL042W RAD28Q12021 506 aa3.07□□□□□ -1.92
SPC42YKL042W YLR053CQ12026 108 aa3.07□□□□□ -1.92
SPC42YKL042W SOL1P50278 321 aa3.06□□□□□ -1.92
SPC42YKL042W HSK3P69852 69 aa3.06□□□□□ -1.92
SPC42YKL042W ANT1Q06497 328 aa3.06□□□□□ -1.92
SPC42YKL042W IRC23Q08416 157 aa3.06□□□□□ -1.92
SPC42YKL042W FLO9P39712 1322 aa3.05□□□□□ -1.92
SPC42YKL042W YGL235WP53071 178 aa3.05□□□□□ -1.92
SPC42YKL042W YMR253CQ04835 414 aa3.05□□□□□ -1.92
SPC42YKL042W YDL180WQ12301 547 aa3.05□□□□□ -1.92
SPC42YKL042W RDI1Q12434 202 aa3.05□□□□□ -1.92
SPC42YKL042W SEC11P15367 167 aa3.04□□□□□ -1.92
SPC42YKL042W PAM17P36147 197 aa3.04□□□□□ -1.92
SPC42YKL042W VMA22P38784 181 aa3.04□□□□□ -1.92
SPC42YKL042W SPC25P40014 221 aa3.04□□□□□ -1.92
SPC42YKL042W YFH7P43591 353 aa3.04□□□□□ -1.92
SPC42YKL042W TTI2P47168 421 aa3.04□□□□□ -1.92
SPC42YKL042W MPA43P53583 542 aaPredicted RBP3.04□□□□□ -1.92
SPC42YKL042W DIG2Q03373 323 aaKnown RBP3.04□□□□□ -1.92
SPC42YKL042W UBC6P33296 250 aaPredicted RBP3.03□□□□□ -1.92
SPC42YKL042W TMA19P35691 167 aaKnown RBP3.03□□□□□ -1.92
SPC42YKL042W TMA20P89886 181 aaPredicted RBP3.03□□□□□ -1.92
SPC42YKL042W MAK3Q03503 176 aa3.03□□□□□ -1.92
SPC42YKL042W IDP1P21954 428 aaKnown RBP3.02□□□□□ -1.93
SPC42YKL042W NSA2P40078 261 aaKnown RBP3.02□□□□□ -1.93
SPC42YKL042W XPT1P47165 209 aa3.02□□□□□ -1.93
SPC42YKL042W SBH1P52870 82 aa3.02□□□□□ -1.93
SPC42YKL042W FYV12Q08559 129 aa3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 131.6 ms