RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W UTP15Q04305 513 aaKnown RBP3□□□□□ -1.93
PTM1YKL039W ATG41Q12048 136 aa3□□□□□ -1.93
PTM1YKL039W YDL211CQ12121 372 aa3□□□□□ -1.93
PTM1YKL039W YPR011CQ12251 326 aa3□□□□□ -1.93
PTM1YKL039W SRY1P36007 326 aa2.99□□□□□ -1.93
PTM1YKL039W CAT5P41735 233 aa2.99□□□□□ -1.93
PTM1YKL039W NSE4P43124 402 aa2.99□□□□□ -1.93
PTM1YKL039W GNA1P43577 159 aaPredicted RBP2.99□□□□□ -1.93
PTM1YKL039W YJR141WP47172 347 aaPredicted RBP2.99□□□□□ -1.93
PTM1YKL039W YJR149WP47177 404 aa2.99□□□□□ -1.93
PTM1YKL039W YGL159WP53110 370 aa2.99□□□□□ -1.93
PTM1YKL039W YGL114WP53134 725 aa2.99□□□□□ -1.93
PTM1YKL039W YMR244WQ04018 355 aa2.99□□□□□ -1.93
PTM1YKL039W RNH202Q05635 350 aa2.99□□□□□ -1.93
PTM1YKL039W NOC4Q06512 552 aaPredicted RBP2.99□□□□□ -1.93
PTM1YKL039W FCF2Q12035 217 aaPredicted RBP2.99□□□□□ -1.93
PTM1YKL039W SPC3Q12133 184 aa2.99□□□□□ -1.93
PTM1YKL039W DFM1Q12743 341 aaKnown RBP2.99□□□□□ -1.93
PTM1YKL039W VMA9Q3E7B6 73 aa2.99□□□□□ -1.93
PTM1YKL039W YIL002W-AQ3E7Z5 69 aa2.99□□□□□ -1.93
PTM1YKL039W CAR2P07991 424 aaKnown RBP2.98□□□□□ -1.93
PTM1YKL039W YFR010W-AP0C5N0 62 aa2.98□□□□□ -1.93
PTM1YKL039W YOL163WP0CF20 169 aa2.98□□□□□ -1.93
PTM1YKL039W MRPL44P19956 98 aa2.98□□□□□ -1.93
PTM1YKL039W IFM1P25038 676 aa2.98□□□□□ -1.93
PTM1YKL039W SUA5P32579 426 aa2.98□□□□□ -1.93
PTM1YKL039W PAU2P32612 120 aa2.98□□□□□ -1.93
PTM1YKL039W EMP24P32803 203 aaKnown RBP2.98□□□□□ -1.93
PTM1YKL039W SSS1P35179 80 aa2.98□□□□□ -1.93
PTM1YKL039W GIM4P40005 111 aaKnown RBP2.98□□□□□ -1.93
PTM1YKL039W SLM1P40485 686 aa2.98□□□□□ -1.93
PTM1YKL039W BAT2P47176 376 aaKnown RBP2.98□□□□□ -1.93
PTM1YKL039W NUP57P48837 541 aa2.98□□□□□ -1.93
PTM1YKL039W TRM9P49957 279 aa2.98□□□□□ -1.93
PTM1YKL039W YGL101WP53144 215 aa2.98□□□□□ -1.93
PTM1YKL039W ERV14P53173 138 aa2.98□□□□□ -1.93
PTM1YKL039W INP1Q03694 420 aa2.98□□□□□ -1.93
PTM1YKL039W OST6Q03723 332 aa2.98□□□□□ -1.93
PTM1YKL039W ELP6Q04868 273 aa2.98□□□□□ -1.93
PTM1YKL039W ECM19Q06011 112 aa2.98□□□□□ -1.93
PTM1YKL039W PEX30Q06169 523 aa2.98□□□□□ -1.93
PTM1YKL039W YPR127WQ06494 345 aa2.98□□□□□ -1.93
PTM1YKL039W ARR2Q06597 130 aa2.98□□□□□ -1.93
PTM1YKL039W SDO1Q07953 250 aaKnown RBP2.98□□□□□ -1.93
PTM1YKL039W SCP1Q08873 200 aa2.98□□□□□ -1.93
PTM1YKL039W AKR2Q12013 749 aa2.98□□□□□ -1.93
PTM1YKL039W GAL7P08431 366 aa2.97□□□□□ -1.93
PTM1YKL039W PUT1P09368 476 aa2.97□□□□□ -1.93
PTM1YKL039W SEC59P20048 519 aa2.97□□□□□ -1.93
PTM1YKL039W PBN1P25580 416 aa2.97□□□□□ -1.93
PTM1YKL039W SFK1P35735 353 aa2.97□□□□□ -1.93
PTM1YKL039W ATG8P38182 117 aaRIP-Chip data2.97□□□□□ -1.93not detected
PTM1YKL039W EMC5P40540 141 aa2.97□□□□□ -1.93
PTM1YKL039W RPL10P41805 221 aaKnown RBP2.97□□□□□ -1.93
PTM1YKL039W HIT1P46973 164 aa2.97□□□□□ -1.93
PTM1YKL039W DOC1P53068 250 aa2.97□□□□□ -1.93
PTM1YKL039W RSM27P53305 110 aa2.97□□□□□ -1.93
PTM1YKL039W YNR062CP53748 327 aa2.97□□□□□ -1.93
PTM1YKL039W HCH1P53834 153 aa2.97□□□□□ -1.93
PTM1YKL039W FMP41P53889 259 aaKnown RBP2.97□□□□□ -1.93
PTM1YKL039W SMD1Q02260 146 aaPredicted RBP2.97□□□□□ -1.93
PTM1YKL039W MRPS17Q03246 237 aaPredicted RBP2.97□□□□□ -1.93
PTM1YKL039W FIT1Q04433 528 aa2.97□□□□□ -1.93
PTM1YKL039W KEI1Q06346 221 aa2.97□□□□□ -1.93
PTM1YKL039W YCL001W-BQ96VH2 84 aa2.97□□□□□ -1.93
PTM1YKL039W RPL25P04456 142 aaKnown RBP2.96□□□□□ -1.94
PTM1YKL039W ADH3P07246 375 aaKnown RBP2.96□□□□□ -1.94
PTM1YKL039W COX9P07255 59 aa2.96□□□□□ -1.94
PTM1YKL039W UBI4P0CG63 381 aaKnown RBP2.96□□□□□ -1.94
PTM1YKL039W MRP1P10662 321 aaKnown RBP2.96□□□□□ -1.94
PTM1YKL039W TRX3P25372 127 aa2.96□□□□□ -1.94
PTM1YKL039W POF1P25576 258 aa2.96□□□□□ -1.94
PTM1YKL039W RPB9P27999 122 aa2.96□□□□□ -1.94
PTM1YKL039W YMR262WP38430 313 aa2.96□□□□□ -1.94
PTM1YKL039W SMB1P40018 196 aaKnown RBP2.96□□□□□ -1.94
PTM1YKL039W TIM21P53220 239 aa2.96□□□□□ -1.94
PTM1YKL039W GMC1Q04399 608 aa2.96□□□□□ -1.94
PTM1YKL039W BOP2Q06150 570 aa2.96□□□□□ -1.94
PTM1YKL039W MIM1Q08176 113 aa2.96□□□□□ -1.94
PTM1YKL039W TPO4Q12256 659 aa2.96□□□□□ -1.94
PTM1YKL039W PST1Q12355 444 aa2.96□□□□□ -1.94
PTM1YKL039W COA6Q3E846 104 aa2.96□□□□□ -1.94
PTM1YKL039W TDH2P00358 332 aaKnown RBP2.95□□□□□ -1.94
PTM1YKL039W CDC28P00546 298 aaKnown RBP2.95□□□□□ -1.94
PTM1YKL039W SPS100P13130 326 aa2.95□□□□□ -1.94
PTM1YKL039W DPM1P14020 267 aaKnown RBP2.95□□□□□ -1.94
PTM1YKL039W CTA1P15202 515 aa2.95□□□□□ -1.94
PTM1YKL039W YKL187CP34231 750 aa2.95□□□□□ -1.94
PTM1YKL039W KTI12P34253 313 aaKnown RBP2.95□□□□□ -1.94
PTM1YKL039W YPT31P38555 223 aaKnown RBP2.95□□□□□ -1.94
PTM1YKL039W ICE2P40499 491 aa2.95□□□□□ -1.94
PTM1YKL039W VMA21P41806 77 aa2.95□□□□□ -1.94
PTM1YKL039W YJR111CP47148 283 aaKnown RBP2.95□□□□□ -1.94
PTM1YKL039W SDS23P53172 527 aa2.95□□□□□ -1.94
PTM1YKL039W PNC1P53184 216 aaKnown RBP2.95□□□□□ -1.94
PTM1YKL039W PGA1P53896 198 aa2.95□□□□□ -1.94
PTM1YKL039W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
PTM1YKL039W SNO1Q03144 224 aa2.95□□□□□ -1.94
PTM1YKL039W BRX1Q08235 291 aaKnown RBP2.95□□□□□ -1.94
PTM1YKL039W RDL2Q08742 149 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms