RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W REP2P03872 296 aa3.36□□□□□ -1.87
TFA1YKL028W CBP6P07253 162 aaPredicted RBP3.36□□□□□ -1.87
TFA1YKL028W CCA1P21269 546 aa3.36□□□□□ -1.87
TFA1YKL028W MRPL27P36526 146 aaPredicted RBP3.36□□□□□ -1.87
TFA1YKL028W KRE9P39005 276 aa3.36□□□□□ -1.87
TFA1YKL028W OST2P46964 130 aa3.36□□□□□ -1.87
TFA1YKL028W CAB4P53332 305 aa3.36□□□□□ -1.87
TFA1YKL028W APJ1P53940 528 aa3.36□□□□□ -1.87
TFA1YKL028W ATG39Q06159 398 aa3.36□□□□□ -1.87
TFA1YKL028W PSF1Q12488 208 aa3.36□□□□□ -1.87
TFA1YKL028W FLO11P08640 1367 aa3.36□□□□□ -1.87
TFA1YKL028W TIM13P53299 105 aa3.36□□□□□ -1.87
TFA1YKL028W YDR366CP87287 132 aa3.36□□□□□ -1.87
TFA1YKL028W CNL1Q06333 122 aa3.36□□□□□ -1.87
TFA1YKL028W YLR412C-AQ3E742 68 aa3.36□□□□□ -1.87
TFA1YKL028W MDS3P53094 1487 aa3.35□□□□□ -1.87
TFA1YKL028W ATP15P21306 62 aa3.35□□□□□ -1.87
TFA1YKL028W HSP30P25619 332 aa3.35□□□□□ -1.87
TFA1YKL028W SHE2P36068 246 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
TFA1YKL028W RPS20P38701 121 aaKnown RBP3.35□□□□□ -1.87
TFA1YKL028W HPM1P40481 377 aa3.35□□□□□ -1.87
TFA1YKL028W YFR054CP43622 192 aa3.35□□□□□ -1.87
TFA1YKL028W RSM10Q03201 203 aa3.35□□□□□ -1.87
TFA1YKL028W DIG2Q03373 323 aaKnown RBP3.35□□□□□ -1.87
TFA1YKL028W NKP2Q06162 153 aa3.35□□□□□ -1.87
TFA1YKL028W YOL014WQ08110 124 aa3.35□□□□□ -1.87
TFA1YKL028W YML100W-AQ8TGT0 57 aa3.35□□□□□ -1.87
TFA1YKL028W YOR304C-AO14468 76 aa3.34□□□□□ -1.88
TFA1YKL028W RPL9AP05738 191 aaKnown RBP3.34□□□□□ -1.88
TFA1YKL028W OPY1P38271 328 aa3.34□□□□□ -1.88
TFA1YKL028W YFL019CP43576 117 aa3.34□□□□□ -1.88
TFA1YKL028W FIP1P45976 327 aa3.34□□□□□ -1.88
TFA1YKL028W RPL9BP51401 191 aaKnown RBP3.34□□□□□ -1.88
TFA1YKL028W YGR039WP53225 103 aa3.34□□□□□ -1.88
TFA1YKL028W HHO1P53551 258 aa3.34□□□□□ -1.88
TFA1YKL028W ALG9P53868 555 aaKnown RBP3.34□□□□□ -1.88
TFA1YKL028W ARL3Q02804 198 aa3.34□□□□□ -1.88
TFA1YKL028W PRP11Q07350 266 aaPredicted RBP3.34□□□□□ -1.88
TFA1YKL028W KIN28P06242 306 aa3.33□□□□□ -1.88
TFA1YKL028W RSA4P25382 515 aaKnown RBP3.33□□□□□ -1.88
TFA1YKL028W MRP49P32388 137 aa3.33□□□□□ -1.88
TFA1YKL028W VMA11P32842 164 aa3.33□□□□□ -1.88
TFA1YKL028W VMA7P39111 118 aa3.33□□□□□ -1.88
TFA1YKL028W ERJ5P43613 295 aaPredicted RBP3.33□□□□□ -1.88
TFA1YKL028W ALB1P47019 175 aaPredicted RBP3.33□□□□□ -1.88
TFA1YKL028W SLM2P53955 656 aa3.33□□□□□ -1.88
TFA1YKL028W NAT3Q06504 195 aa3.33□□□□□ -1.88
TFA1YKL028W ATP5P09457 212 aa3.32□□□□□ -1.88
TFA1YKL028W RPS1BP23248 255 aaKnown RBP3.32□□□□□ -1.88
TFA1YKL028W UGX2P32772 223 aa3.32□□□□□ -1.88
TFA1YKL028W PAN3P36102 679 aaPredicted RBP3.32□□□□□ -1.88
TFA1YKL028W MRPL24P36525 258 aaPredicted RBP3.32□□□□□ -1.88
TFA1YKL028W YHR125WP38831 101 aa3.32□□□□□ -1.88
TFA1YKL028W YER134CP40081 178 aa3.32□□□□□ -1.88
TFA1YKL028W PRE5P40302 234 aaKnown RBP3.32□□□□□ -1.88
TFA1YKL028W MRPS16Q02608 121 aa3.32□□□□□ -1.88
TFA1YKL028W FCF1Q05498 189 aaPredicted RBP3.32□□□□□ -1.88
TFA1YKL028W SKI3P17883 1432 aaKnown RBP3.31□□□□□ -1.88
TFA1YKL028W TIR1P10863 254 aa3.31□□□□□ -1.88
TFA1YKL028W TFC1P32367 649 aa3.31□□□□□ -1.88
TFA1YKL028W FMP46P36141 133 aaKnown RBP3.31□□□□□ -1.88
TFA1YKL028W FCY21P40039 528 aa3.31□□□□□ -1.88
TFA1YKL028W YER181CP40097 107 aa3.31□□□□□ -1.88
TFA1YKL028W YNL200CP40165 246 aaKnown RBP3.31□□□□□ -1.88
TFA1YKL028W ARC15P40518 154 aaRIP-Chip data3.31□□□□□ -1.88not detected
TFA1YKL028W GLR1P41921 483 aaKnown RBP3.31□□□□□ -1.88
TFA1YKL028W YGR219WP53307 113 aa3.31□□□□□ -1.88
TFA1YKL028W SMD1Q02260 146 aaPredicted RBP3.31□□□□□ -1.88
TFA1YKL028W VPS71Q03433 280 aa3.31□□□□□ -1.88
TFA1YKL028W RUB1Q03919 77 aa3.31□□□□□ -1.88
TFA1YKL028W SPG3Q04398 127 aaPredicted RBP3.31□□□□□ -1.88
TFA1YKL028W AUS1Q08409 1394 aa3.3□□□□□ -1.88
TFA1YKL028W TIM9O74700 87 aa3.3□□□□□ -1.88
TFA1YKL028W PHO85P17157 305 aa3.3□□□□□ -1.88
TFA1YKL028W PGD1P40356 397 aa3.3□□□□□ -1.88
TFA1YKL028W CGI121Q03705 181 aaKnown RBP3.3□□□□□ -1.88
TFA1YKL028W YIR021W-AQ3E739 70 aa3.3□□□□□ -1.88
TFA1YKL028W YMR230W-AQ3E7B5 62 aa3.3□□□□□ -1.88
TFA1YKL028W YAR023CD6VPM8 179 aa3.29□□□□□ -1.88
TFA1YKL028W RAD10P06838 210 aa3.29□□□□□ -1.88
TFA1YKL028W CPA1P07258 411 aaKnown RBP3.29□□□□□ -1.88
TFA1YKL028W UTP11P34247 250 aaPredicted RBP3.29□□□□□ -1.88
TFA1YKL028W PTC1P35182 281 aa3.29□□□□□ -1.88
TFA1YKL028W VTC1P40046 129 aaRIP-Chip data3.29□□□□□ -1.88not detected
TFA1YKL028W DSK2P48510 373 aa3.29□□□□□ -1.88
TFA1YKL028W YOR214CQ12282 236 aa3.29□□□□□ -1.88
TFA1YKL028W IES3Q12345 250 aa3.29□□□□□ -1.88
TFA1YKL028W ODC2Q99297 307 aa3.29□□□□□ -1.88
TFA1YKL028W SNT2P53127 1403 aa3.29□□□□□ -1.88
TFA1YKL028W MRPL17P36528 281 aa3.28□□□□□ -1.88
TFA1YKL028W AYR1P40471 297 aa3.28□□□□□ -1.88
TFA1YKL028W YPI1P43587 155 aa3.28□□□□□ -1.88
TFA1YKL028W GPI2P46961 280 aa3.28□□□□□ -1.88
TFA1YKL028W APS2Q00381 147 aa3.28□□□□□ -1.88
TFA1YKL028W MCH1Q07376 486 aa3.28□□□□□ -1.88
TFA1YKL028W FCY1Q12178 158 aa3.28□□□□□ -1.88
TFA1YKL028W FMP49A0A023PZB3 126 aa3.27□□□□□ -1.89
TFA1YKL028W SPT14P32363 452 aa3.27□□□□□ -1.89
TFA1YKL028W TRS20P38334 175 aa3.27□□□□□ -1.89
TFA1YKL028W FYV4P38783 130 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms