RNA–Protein interactions for RNA: YJR140C

HIR3, Transcript of Subunit of the HIR complex, yeastyeast

Gene HIR3, Length 4,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIR3YJR140C YIP3P53633 176 aa1.22□□□□□ -2.21
HIR3YJR140C BUD25P85052 153 aa1.22□□□□□ -2.21
HIR3YJR140C LSM1P47017 172 aaKnown RBP1.22□□□□□ -2.21
HIR3YJR140C YNR062CP53748 327 aa1.22□□□□□ -2.21
HIR3YJR140C CGI121Q03705 181 aaKnown RBP1.22□□□□□ -2.21
HIR3YJR140C SHH3Q04487 196 aa1.22□□□□□ -2.21
HIR3YJR140C EFG1Q3E705 233 aaKnown RBP1.22□□□□□ -2.21
HIR3YJR140C YHR032W-AP0C5N6 59 aa1.21□□□□□ -2.22
HIR3YJR140C BUB2P26448 306 aaPredicted RBP1.21□□□□□ -2.22
HIR3YJR140C ARO7P32178 256 aa1.21□□□□□ -2.22
HIR3YJR140C UTP30P36144 274 aaKnown RBP1.21□□□□□ -2.22
HIR3YJR140C PHO88P38264 188 aaPredicted RBP1.21□□□□□ -2.22
HIR3YJR140C YHR180WP38868 163 aa1.21□□□□□ -2.22
HIR3YJR140C SLM2P53955 656 aa1.21□□□□□ -2.22
HIR3YJR140C AME1P38313 324 aa1.21□□□□□ -2.22
HIR3YJR140C NSA2P40078 261 aaKnown RBP1.21□□□□□ -2.22
HIR3YJR140C TIR3P40552 269 aa1.21□□□□□ -2.22
HIR3YJR140C MOG1P47123 218 aa1.21□□□□□ -2.22
HIR3YJR140C YPL229WQ99395 206 aa1.21□□□□□ -2.22
HIR3YJR140C SPO13P23624 291 aa1.21□□□□□ -2.22
HIR3YJR140C YKL102CP34249 101 aa1.21□□□□□ -2.22
HIR3YJR140C CUP9P41817 306 aa1.21□□□□□ -2.22
HIR3YJR140C ARP3P47117 449 aaKnown RBP1.21□□□□□ -2.22
HIR3YJR140C PKR1Q03880 122 aaKnown RBP1.21□□□□□ -2.22
HIR3YJR140C RAV2Q03956 351 aa1.21□□□□□ -2.22
HIR3YJR140C RDI1Q12434 202 aa1.21□□□□□ -2.22
HIR3YJR140C YAR023CD6VPM8 179 aa1.21□□□□□ -2.22
HIR3YJR140C DER1P38307 211 aa1.21□□□□□ -2.22
HIR3YJR140C PRM10P42946 383 aa1.21□□□□□ -2.22
HIR3YJR140C YDL012CQ12489 107 aa1.21□□□□□ -2.22
HIR3YJR140C YHR214C-EQ8TGK0 99 aa1.21□□□□□ -2.22
HIR3YJR140C APA2P22108 325 aa1.2□□□□□ -2.22
HIR3YJR140C OPY1P38271 328 aa1.2□□□□□ -2.22
HIR3YJR140C DSE2P38844 325 aa1.2□□□□□ -2.22
HIR3YJR140C RFC2P40348 353 aa1.2□□□□□ -2.22
HIR3YJR140C YDL180WQ12301 547 aa1.2□□□□□ -2.22
HIR3YJR140C YFH7P43591 353 aa1.2□□□□□ -2.22
HIR3YJR140C YDR391CQ04170 232 aa1.2□□□□□ -2.22
HIR3YJR140C VPS68Q12016 184 aa1.2□□□□□ -2.22
HIR3YJR140C DGK1Q12382 290 aa1.2□□□□□ -2.22
HIR3YJR140C RPS28BP0C0X0 67 aaKnown RBP1.2□□□□□ -2.22
HIR3YJR140C TMA19P35691 167 aaKnown RBP1.2□□□□□ -2.22
HIR3YJR140C FMP23P38231 175 aa1.2□□□□□ -2.22
HIR3YJR140C PET191Q02772 108 aa1.2□□□□□ -2.22
HIR3YJR140C RPS28AQ3E7X9 67 aaPredicted RBP1.2□□□□□ -2.22
HIR3YJR140C SFK1P35735 353 aa1.2□□□□□ -2.22
HIR3YJR140C EDC3P39998 551 aaKnown RBP1.2□□□□□ -2.22
HIR3YJR140C PEP8P40335 379 aa1.2□□□□□ -2.22
HIR3YJR140C VPS28Q02767 242 aa1.2□□□□□ -2.22
HIR3YJR140C ANT1Q06497 328 aa1.2□□□□□ -2.22
HIR3YJR140C YOL160WQ08321 113 aa1.2□□□□□ -2.22
HIR3YJR140C FCY21P40039 528 aa1.19□□□□□ -2.22
HIR3YJR140C SBH2P52871 88 aa1.19□□□□□ -2.22
HIR3YJR140C YFR032C-BQ8TGU2 87 aa1.19□□□□□ -2.22
HIR3YJR140C ATP15P21306 62 aa1.19□□□□□ -2.22
HIR3YJR140C FZF1P32805 299 aa1.19□□□□□ -2.22
HIR3YJR140C HHT1P61830 136 aa1.19□□□□□ -2.22
HIR3YJR140C YOR015WQ12169 119 aa1.19□□□□□ -2.22
HIR3YJR140C SCL1P21243 252 aaKnown RBP1.19□□□□□ -2.22
HIR3YJR140C YAP3P38749 330 aa1.19□□□□□ -2.22
HIR3YJR140C YER076CP40049 302 aa1.19□□□□□ -2.22
HIR3YJR140C ERJ5P43613 295 aaPredicted RBP1.19□□□□□ -2.22
HIR3YJR140C YRA2P36036 203 aaKnown RBP RIP-Chip data1.19□□□□□ -2.22not detected
HIR3YJR140C YHR022CP38763 256 aa1.19□□□□□ -2.22
HIR3YJR140C DLS1P40366 167 aa1.19□□□□□ -2.22
HIR3YJR140C HRT1Q08273 121 aa1.19□□□□□ -2.22
HIR3YJR140C YOR214CQ12282 236 aa1.19□□□□□ -2.22
HIR3YJR140C YHR139C-AO13536 103 aa1.18□□□□□ -2.22
HIR3YJR140C PIR5P46999 287 aa1.18□□□□□ -2.22
HIR3YJR140C TTI2P47168 421 aa1.18□□□□□ -2.22
HIR3YJR140C SMD2Q06217 110 aaKnown RBP1.18□□□□□ -2.22
HIR3YJR140C ATP14Q12349 124 aa1.18□□□□□ -2.22
HIR3YJR140C YJR111CP47148 283 aaKnown RBP1.18□□□□□ -2.22
HIR3YJR140C CCC1P47818 322 aa1.18□□□□□ -2.22
HIR3YJR140C NQM1P53228 333 aaPredicted RBP1.18□□□□□ -2.22
HIR3YJR140C POP3P53833 195 aaPredicted RBP1.18□□□□□ -2.22
HIR3YJR140C LSM3P57743 89 aaKnown RBP1.18□□□□□ -2.22
HIR3YJR140C YHR007C-AQ07074 71 aa1.18□□□□□ -2.22
HIR3YJR140C YML100W-AQ8TGT0 57 aa1.18□□□□□ -2.22
HIR3YJR140C POP7P38291 140 aa1.18□□□□□ -2.22
HIR3YJR140C SOK1P40317 901 aa1.18□□□□□ -2.22
HIR3YJR140C SMD3P43321 101 aaKnown RBP1.18□□□□□ -2.22
HIR3YJR140C RAD6P06104 172 aa1.18□□□□□ -2.22
HIR3YJR140C HSP30P25619 332 aa1.18□□□□□ -2.22
HIR3YJR140C AGE2P40529 298 aa1.18□□□□□ -2.22
HIR3YJR140C YGL101WP53144 215 aa1.18□□□□□ -2.22
HIR3YJR140C ATP19P81451 68 aa1.18□□□□□ -2.22
HIR3YJR140C CYT2Q00873 224 aa1.18□□□□□ -2.22
HIR3YJR140C MIX17Q03667 156 aa1.18□□□□□ -2.22
HIR3YJR140C RDS3Q06835 107 aaPredicted RBP1.18□□□□□ -2.22
HIR3YJR140C DAS2Q12084 232 aa1.18□□□□□ -2.22
HIR3YJR140C IDP1P21954 428 aaKnown RBP1.17□□□□□ -2.22
HIR3YJR140C YER084WP40057 128 aa1.17□□□□□ -2.22
HIR3YJR140C AYR1P40471 297 aa1.17□□□□□ -2.22
HIR3YJR140C RBL2P48606 106 aaKnown RBP1.17□□□□□ -2.22
HIR3YJR140C YDR274CP87283 123 aa1.17□□□□□ -2.22
HIR3YJR140C NSP1P14907 823 aaKnown RBP1.17□□□□□ -2.22
HIR3YJR140C SPC25P40014 221 aa1.17□□□□□ -2.22
HIR3YJR140C GPI14P47088 403 aaKnown RBP1.17□□□□□ -2.22
HIR3YJR140C HRD1Q08109 551 aa1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 171.5 ms