RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeastyeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD5YJR132W VFA1P40080 203 aa5.86□□□□□ -1.47
NMD5YJR132W HRT1Q08273 121 aa5.86□□□□□ -1.47
NMD5YJR132W DIF1O13577 133 aa5.86□□□□□ -1.47
NMD5YJR132W SEC4P07560 215 aaKnown RBP5.86□□□□□ -1.47
NMD5YJR132W TMA19P35691 167 aaKnown RBP5.86□□□□□ -1.47
NMD5YJR132W CCS1P40202 249 aaKnown RBP5.86□□□□□ -1.47
NMD5YJR132W PUS2P53167 370 aa5.86□□□□□ -1.47
NMD5YJR132W HST4P53688 370 aa5.86□□□□□ -1.47
NMD5YJR132W ACM1Q08981 209 aa5.86□□□□□ -1.47
NMD5YJR132W YNL277W-AQ3E7Z0 62 aa5.86□□□□□ -1.47
NMD5YJR132W DUR1,2P32528 1835 aaKnown RBP5.86□□□□□ -1.47
NMD5YJR132W GAR1P28007 205 aaKnown RBP5.85□□□□□ -1.47
NMD5YJR132W QRI5P32344 111 aa5.85□□□□□ -1.47
NMD5YJR132W COX13P32799 129 aa5.85□□□□□ -1.47
NMD5YJR132W SDH4P37298 181 aa5.85□□□□□ -1.47
NMD5YJR132W BUD13P46947 266 aaPredicted RBP5.85□□□□□ -1.47
NMD5YJR132W YDL218WQ07629 317 aa5.85□□□□□ -1.47
NMD5YJR132W YLR049CQ12110 428 aa5.85□□□□□ -1.47
NMD5YJR132W YLR126CQ12288 251 aa5.85□□□□□ -1.47
NMD5YJR132W KTI11Q3E840 82 aa5.85□□□□□ -1.47
NMD5YJR132W SNF4P12904 322 aa5.85□□□□□ -1.47
NMD5YJR132W YCK3P39962 524 aa5.85□□□□□ -1.47
NMD5YJR132W HXT10P43581 546 aa5.85□□□□□ -1.47
NMD5YJR132W SIR2P06700 562 aa5.85□□□□□ -1.47
NMD5YJR132W SOR1P35497 357 aaKnown RBP5.85□□□□□ -1.47
NMD5YJR132W SWD2P36104 329 aaPredicted RBP5.85□□□□□ -1.47
NMD5YJR132W SWM2P40342 146 aa5.85□□□□□ -1.47
NMD5YJR132W PRM5P40476 318 aa5.85□□□□□ -1.47
NMD5YJR132W PAM16P42949 149 aa5.85□□□□□ -1.47
NMD5YJR132W TOS2P50078 622 aa5.85□□□□□ -1.47
NMD5YJR132W YGR039WP53225 103 aa5.85□□□□□ -1.47
NMD5YJR132W SOR2Q07786 357 aa5.85□□□□□ -1.47
NMD5YJR132W VMR1P38735 1592 aa5.84□□□□□ -1.47
NMD5YJR132W RPS2P25443 254 aaKnown RBP5.84□□□□□ -1.47
NMD5YJR132W CLB6P32943 380 aa5.84□□□□□ -1.47
NMD5YJR132W YPL073CP40323 161 aa5.84□□□□□ -1.47
NMD5YJR132W MOB2P43563 287 aa5.84□□□□□ -1.47
NMD5YJR132W DUG3P53871 357 aa5.84□□□□□ -1.47
NMD5YJR132W UPS1Q05776 175 aa5.84□□□□□ -1.47
NMD5YJR132W SNX3Q08826 162 aaKnown RBP5.84□□□□□ -1.47
NMD5YJR132W YPS3Q12303 508 aa5.84□□□□□ -1.47
NMD5YJR132W ADH1P00330 348 aaKnown RBP5.84□□□□□ -1.47
NMD5YJR132W CDC43P18898 376 aa5.84□□□□□ -1.47
NMD5YJR132W NUD1P32336 851 aa5.84□□□□□ -1.47
NMD5YJR132W GPX2P38143 162 aa5.84□□□□□ -1.47
NMD5YJR132W YDR344CQ05510 147 aa5.84□□□□□ -1.47
NMD5YJR132W LOA1Q06508 300 aa5.84□□□□□ -1.47
NMD5YJR132W RNH203Q12338 110 aa5.84□□□□□ -1.47
NMD5YJR132W IZH2Q12442 317 aa5.84□□□□□ -1.47
NMD5YJR132W COX5AP00424 153 aa5.83□□□□□ -1.48
NMD5YJR132W HSP26P15992 214 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
NMD5YJR132W UTR5P32630 166 aa5.83□□□□□ -1.48
NMD5YJR132W VMA21P41806 77 aa5.83□□□□□ -1.48
NMD5YJR132W SMM1P53720 384 aaKnown RBP5.83□□□□□ -1.48
NMD5YJR132W PRM3Q08931 133 aa5.83□□□□□ -1.48
NMD5YJR132W UBR1P19812 1950 aa5.83□□□□□ -1.48
NMD5YJR132W MBF1O14467 151 aaKnown RBP5.83□□□□□ -1.48
NMD5YJR132W MRPL20P22354 195 aaPredicted RBP5.83□□□□□ -1.48
NMD5YJR132W GLC7P32598 312 aaKnown RBP5.83□□□□□ -1.48
NMD5YJR132W YSC84P32793 468 aa5.83□□□□□ -1.48
NMD5YJR132W NMA2P53204 395 aa5.83□□□□□ -1.48
NMD5YJR132W YGK3Q12222 375 aaPredicted RBP5.83□□□□□ -1.48
NMD5YJR132W YLR412C-AQ3E742 68 aa5.83□□□□□ -1.48
NMD5YJR132W YPL229WQ99395 206 aa5.83□□□□□ -1.48
NMD5YJR132W TOM40P23644 387 aaKnown RBP5.83□□□□□ -1.48
NMD5YJR132W SMD3P43321 101 aaKnown RBP5.83□□□□□ -1.48
NMD5YJR132W RRT5P43607 289 aa5.83□□□□□ -1.48
NMD5YJR132W MSY1P48527 492 aa5.83□□□□□ -1.48
NMD5YJR132W CPD1P53314 239 aa5.83□□□□□ -1.48
NMD5YJR132W YMR082CQ04276 118 aa5.83□□□□□ -1.48
NMD5YJR132W OPI3P05375 206 aa5.82□□□□□ -1.48
NMD5YJR132W RIP1P08067 215 aa5.82□□□□□ -1.48
NMD5YJR132W RPL11AP0C0W9 174 aaKnown RBP5.82□□□□□ -1.48
NMD5YJR132W ATS1P31386 333 aa5.82□□□□□ -1.48
NMD5YJR132W ERG24P32462 438 aaKnown RBP5.82□□□□□ -1.48
NMD5YJR132W LSM3P57743 89 aaKnown RBP5.82□□□□□ -1.48
NMD5YJR132W RPL11BQ3E757 174 aaPredicted RBP5.82□□□□□ -1.48
NMD5YJR132W BNI1P41832 1953 aa5.82□□□□□ -1.48
NMD5YJR132W YIL029CP40538 142 aa5.82□□□□□ -1.48
NMD5YJR132W YFR045WP43617 309 aa5.82□□□□□ -1.48
NMD5YJR132W SLG1P54867 378 aa5.82□□□□□ -1.48
NMD5YJR132W GAS3Q03655 524 aa5.82□□□□□ -1.48
NMD5YJR132W YMR103CQ04436 120 aa5.82□□□□□ -1.48
NMD5YJR132W YDR029WQ12111 104 aa5.82□□□□□ -1.48
NMD5YJR132W RPS25BP0C0T4 108 aaKnown RBP5.81□□□□□ -1.48
NMD5YJR132W KAR4P25583 335 aa5.81□□□□□ -1.48
NMD5YJR132W YBR144CP34215 104 aa5.81□□□□□ -1.48
NMD5YJR132W YBL081WP38180 368 aaKnown RBP5.81□□□□□ -1.48
NMD5YJR132W INM1P38710 295 aa5.81□□□□□ -1.48
NMD5YJR132W ARP3P47117 449 aaKnown RBP5.81□□□□□ -1.48
NMD5YJR132W TOS8P53147 276 aa5.81□□□□□ -1.48
NMD5YJR132W IES4Q08561 116 aa5.81□□□□□ -1.48
NMD5YJR132W RPS25AQ3E792 108 aaPredicted RBP5.81□□□□□ -1.48
NMD5YJR132W RPL7AP05737 244 aaKnown RBP5.81□□□□□ -1.48
NMD5YJR132W YMC1P32331 307 aa5.81□□□□□ -1.48
NMD5YJR132W PIN3Q06449 215 aa5.81□□□□□ -1.48
NMD5YJR132W PAU23Q07987 124 aa5.81□□□□□ -1.48
NMD5YJR132W PAU17Q12370 124 aa5.81□□□□□ -1.48
NMD5YJR132W ZRT1P32804 376 aa5.81□□□□□ -1.48
NMD5YJR132W YFR054CP43622 192 aa5.81□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms