RNA–Protein interactions for RNA: YJL089W

SIP4, Transcript of C6 zinc cluster transcriptional activator, yeast

Gene SIP4, Length 2,490 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP4	YJL089W	PCL7	P40186	285 aa		0.91	□□□□□ -2.26
SIP4	YJL089W	YIL060W	P40519	144 aa		0.91	□□□□□ -2.26
SIP4	YJL089W	OTU1	P43558	301 aa		0.91	□□□□□ -2.26
SIP4	YJL089W	YFL015C	P43578	164 aa		0.91	□□□□□ -2.26
SIP4	YJL089W	TOS8	P53147	276 aa		0.91	□□□□□ -2.26
SIP4	YJL089W	DUO1	P53168	247 aa	Known RBP	0.91	□□□□□ -2.26
SIP4	YJL089W	YGR151C	P53287	111 aa		0.91	□□□□□ -2.26
SIP4	YJL089W	ERV29	P53337	310 aa		0.91	□□□□□ -2.26
SIP4	YJL089W	CPR8	P53728	308 aa		0.91	□□□□□ -2.26
SIP4	YJL089W	YNL234W	P53857	426 aa		0.91	□□□□□ -2.26
SIP4	YJL089W	YDR274C	P87283	123 aa		0.91	□□□□□ -2.26
SIP4	YJL089W	YML018C	Q03730	393 aa		0.91	□□□□□ -2.26
SIP4	YJL089W	NDE2	Q07500	545 aa		0.91	□□□□□ -2.26
SIP4	YJL089W	PAM18	Q07914	168 aa		0.91	□□□□□ -2.26
SIP4	YJL089W	YOR283W	Q12040	230 aa	Known RBP	0.91	□□□□□ -2.26
SIP4	YJL089W	INP53	Q12271	1107 aa		0.91	□□□□□ -2.26
SIP4	YJL089W	YOR192C-C	Q3E736	78 aa		0.91	□□□□□ -2.26
SIP4	YJL089W	YOS1	Q3E834	85 aa		0.91	□□□□□ -2.26
SIP4	YJL089W	URA2	P07259	2214 aa	Known RBP	0.91	□□□□□ -2.26
SIP4	YJL089W	HTB1	P02293	131 aa	Known RBP	0.9	□□□□□ -2.27
SIP4	YJL089W	ARG80	P07249	177 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	QCR2	P07257	368 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	SEN2	P16658	377 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	STF2	P16965	84 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	ERV1	P27882	189 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	ACP1	P32463	125 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	MRPL38	P35996	138 aa	Predicted RBP	0.9	□□□□□ -2.27
SIP4	YJL089W	MRPL3	P36516	390 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	ERV15	P38312	142 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	HTD2	P38790	280 aa	Known RBP	0.9	□□□□□ -2.27
SIP4	YJL089W	LSM12	P38828	187 aa	Known RBP	0.9	□□□□□ -2.27
SIP4	YJL089W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	0.9	□□□□□ -2.27	not detected
SIP4	YJL089W	SSO2	P39926	295 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	PAM16	P42949	149 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	YFR035C	P43608	114 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	AIM25	P47140	327 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	UBP8	P50102	471 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	CWC23	P52868	283 aa	Predicted RBP	0.9	□□□□□ -2.27
SIP4	YJL089W	ARO8	P53090	500 aa	Known RBP	0.9	□□□□□ -2.27
SIP4	YJL089W	TPN1	P53099	579 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	GPG1	P53130	126 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	YAP1802	P53309	568 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	ACT1	P60010	375 aa	Known RBP	0.9	□□□□□ -2.27
SIP4	YJL089W	BUD25	P85052	153 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	THI74	Q04083	370 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	GRH1	Q04410	372 aa	Known RBP	0.9	□□□□□ -2.27
SIP4	YJL089W	RTT103	Q05543	409 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	PEX10	Q05568	337 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	MCH1	Q07376	486 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	YLR031W	Q07978	186 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	GEP3	Q08622	556 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	YPL199C	Q08954	240 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	YPL162C	Q12042	273 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	FCY1	Q12178	158 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	YPS3	Q12303	508 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	ISN1	Q99312	450 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	YLL053C	P0CD98	152 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	POP5	P28005	173 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	MRP17	P28778	131 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	UTP11	P34247	250 aa	Predicted RBP	0.9	□□□□□ -2.27
SIP4	YJL089W	RRT1	P38192	103 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	CDS1	P38221	457 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	YBR184W	P38299	523 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	DOG2	P38773	246 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	DOG1	P38774	246 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	GET2	P40056	285 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	LST8	P41318	303 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	AGX1	P43567	385 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	CAF16	P43569	289 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	IRC18	P47056	224 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	NIF3	P53081	288 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	ALG13	P53178	202 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	LSM7	P53905	115 aa	Known RBP	0.9	□□□□□ -2.27
SIP4	YJL089W	FYV6	P53913	173 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	MGR3	Q04472	501 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	RRG8	Q06109	277 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	YFH1	Q07540	174 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	LDS2	Q08218	356 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	YOL118C	Q08259	102 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	AEP3	Q12089	606 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	YCT1	Q12235	531 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	AGC1	Q12482	902 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	PRM4	Q12498	284 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	HUG1	Q6Q5K6	68 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	TRA1	P38811	3744 aa		0.9	□□□□□ -2.27
SIP4	YJL089W	CYC3	P06182	269 aa		0.89	□□□□□ -2.27
SIP4	YJL089W	NHP6B	P11633	99 aa	Known RBP	0.89	□□□□□ -2.27
SIP4	YJL089W	CAP2	P13517	287 aa		0.89	□□□□□ -2.27
SIP4	YJL089W	CDC43	P18898	376 aa		0.89	□□□□□ -2.27
SIP4	YJL089W	YCR016W	P25617	290 aa	Known RBP	0.89	□□□□□ -2.27
SIP4	YJL089W	SPT14	P32363	452 aa		0.89	□□□□□ -2.27
SIP4	YJL089W	AGA2	P32781	87 aa		0.89	□□□□□ -2.27
SIP4	YJL089W	YKR045C	P36138	183 aa		0.89	□□□□□ -2.27
SIP4	YJL089W	ATP3	P38077	311 aa	Known RBP	0.89	□□□□□ -2.27
SIP4	YJL089W	YBL071C	P38185	102 aa		0.89	□□□□□ -2.27
SIP4	YJL089W	SNF11	P38956	169 aa		0.89	□□□□□ -2.27
SIP4	YJL089W	NSA2	P40078	261 aa	Known RBP	0.89	□□□□□ -2.27
SIP4	YJL089W	POR2	P40478	281 aa		0.89	□□□□□ -2.27
SIP4	YJL089W	CAT5	P41735	233 aa		0.89	□□□□□ -2.27
SIP4	YJL089W	SER2	P42941	309 aa		0.89	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 40.7 ms