RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W MRS4P23500 304 aa11.45□□□□□ -0.58
RPN10YHR200W SRB6P32570 121 aa11.45□□□□□ -0.58
RPN10YHR200W UPS2P35200 230 aa11.45□□□□□ -0.58
RPN10YHR200W BNA1P47096 177 aa11.45□□□□□ -0.58
RPN10YHR200W SNN1P48232 102 aa11.45□□□□□ -0.58
RPN10YHR200W YPS3Q12303 508 aa11.45□□□□□ -0.58
RPN10YHR200W YPR071WQ12346 211 aa11.45□□□□□ -0.58
RPN10YHR200W Q0297Q9ZZV8 51 aa11.45□□□□□ -0.58
RPN10YHR200W ATP3P38077 311 aaKnown RBP11.44□□□□□ -0.58
RPN10YHR200W ALG14P38242 237 aa11.44□□□□□ -0.58
RPN10YHR200W SPC25P40014 221 aa11.44□□□□□ -0.58
RPN10YHR200W COX15P40086 486 aa11.44□□□□□ -0.58
RPN10YHR200W PRR2Q12310 699 aa11.44□□□□□ -0.58
RPN10YHR200W URA5P13298 226 aaKnown RBP11.43□□□□□ -0.58
RPN10YHR200W LDS1P31379 325 aa11.43□□□□□ -0.58
RPN10YHR200W CAF16P43569 289 aa11.43□□□□□ -0.58
RPN10YHR200W YFL015CP43578 164 aa11.43□□□□□ -0.58
RPN10YHR200W YJR056CP47115 236 aa11.43□□□□□ -0.58
RPN10YHR200W SUT1P53032 299 aaKnown RBP11.43□□□□□ -0.58
RPN10YHR200W YAP1802P53309 568 aa11.43□□□□□ -0.58
RPN10YHR200W FMP41P53889 259 aaKnown RBP11.43□□□□□ -0.58
RPN10YHR200W MIX17Q03667 156 aa11.43□□□□□ -0.58
RPN10YHR200W PHO85P17157 305 aa11.42□□□□□ -0.58
RPN10YHR200W MSK1P32048 576 aa11.42□□□□□ -0.58
RPN10YHR200W RAD23P32628 398 aaKnown RBP11.42□□□□□ -0.58
RPN10YHR200W YBR184WP38299 523 aa11.42□□□□□ -0.58
RPN10YHR200W PSD1P39006 500 aa11.42□□□□□ -0.58
RPN10YHR200W GZF3P42944 551 aaKnown RBP11.42□□□□□ -0.58
RPN10YHR200W ODC1Q03028 310 aa11.42□□□□□ -0.58
RPN10YHR200W RAX2Q12465 1220 aa11.42□□□□□ -0.58
RPN10YHR200W FCY2P17064 533 aa11.41□□□□□ -0.58
RPN10YHR200W NSA2P40078 261 aaKnown RBP11.41□□□□□ -0.58
RPN10YHR200W CAF40P53829 373 aa11.41□□□□□ -0.58
RPN10YHR200W SDO1Q07953 250 aaKnown RBP11.41□□□□□ -0.58
RPN10YHR200W HTB1P02293 131 aaKnown RBP11.4□□□□□ -0.58
RPN10YHR200W SIP1P32578 815 aa11.4□□□□□ -0.58
RPN10YHR200W STD1Q02794 444 aa11.4□□□□□ -0.58
RPN10YHR200W TMA23Q03525 211 aa11.4□□□□□ -0.58
RPN10YHR200W YDL242WQ07746 117 aa11.4□□□□□ -0.58
RPN10YHR200W COX19Q3E731 98 aa11.4□□□□□ -0.58
RPN10YHR200W NOP1P15646 327 aaKnown RBP11.39□□□□□ -0.59
RPN10YHR200W PRE3P38624 215 aa11.39□□□□□ -0.59
RPN10YHR200W DFG10P40526 253 aa11.39□□□□□ -0.59
RPN10YHR200W HXT14P42833 540 aa11.39□□□□□ -0.59
RPN10YHR200W HCH1P53834 153 aa11.39□□□□□ -0.59
RPN10YHR200W RPS25BP0C0T4 108 aaKnown RBP11.38□□□□□ -0.59
RPN10YHR200W QCR9P22289 66 aa11.38□□□□□ -0.59
RPN10YHR200W SHB17P36136 271 aaKnown RBP11.38□□□□□ -0.59
RPN10YHR200W YFL054CP43549 646 aa11.38□□□□□ -0.59
RPN10YHR200W MCM22P47167 239 aa11.38□□□□□ -0.59
RPN10YHR200W ADD37Q03233 198 aa11.38□□□□□ -0.59
RPN10YHR200W FRQ1Q06389 190 aa11.38□□□□□ -0.59
RPN10YHR200W TDA6Q06466 467 aa11.38□□□□□ -0.59
RPN10YHR200W RPS25AQ3E792 108 aaPredicted RBP11.38□□□□□ -0.59
RPN10YHR200W VMA9Q3E7B6 73 aa11.38□□□□□ -0.59
RPN10YHR200W ADE8P04161 214 aa11.37□□□□□ -0.59
RPN10YHR200W SMD3P43321 101 aaKnown RBP11.37□□□□□ -0.59
RPN10YHR200W ERV25P54837 211 aaKnown RBP11.37□□□□□ -0.59
RPN10YHR200W DYN2Q02647 92 aa11.37□□□□□ -0.59
RPN10YHR200W RAD28Q12021 506 aa11.37□□□□□ -0.59
RPN10YHR200W YOR015WQ12169 119 aa11.37□□□□□ -0.59
RPN10YHR200W RIB5P38145 238 aa11.36□□□□□ -0.59
RPN10YHR200W WSS1P38838 269 aa11.36□□□□□ -0.59
RPN10YHR200W DAL4Q04895 635 aa11.36□□□□□ -0.59
RPN10YHR200W YCR025CP25352 136 aa11.35□□□□□ -0.59
RPN10YHR200W VMA11P32842 164 aa11.35□□□□□ -0.59
RPN10YHR200W RIB4P50861 169 aaPredicted RBP11.35□□□□□ -0.59
RPN10YHR200W SPO13P23624 291 aa11.34□□□□□ -0.59
RPN10YHR200W SUA7P29055 345 aaPredicted RBP11.34□□□□□ -0.59
RPN10YHR200W FPR2P32472 135 aa11.34□□□□□ -0.59
RPN10YHR200W YGR269WP40326 108 aa11.34□□□□□ -0.59
RPN10YHR200W GNP1P48813 663 aa11.34□□□□□ -0.59
RPN10YHR200W JID1Q12350 301 aa11.34□□□□□ -0.59
RPN10YHR200W POC4Q12245 148 aaPredicted RBP11.33□□□□□ -0.6
RPN10YHR200W AHT1P29589 182 aa11.32□□□□□ -0.6
RPN10YHR200W YGR151CP53287 111 aa11.32□□□□□ -0.6
RPN10YHR200W NDE2Q07500 545 aa11.32□□□□□ -0.6
RPN10YHR200W ATO3Q12359 275 aa11.32□□□□□ -0.6
RPN10YHR200W ILV5P06168 395 aaKnown RBP11.31□□□□□ -0.6
RPN10YHR200W TOM40P23644 387 aaKnown RBP11.31□□□□□ -0.6
RPN10YHR200W BOR1P53838 576 aa11.31□□□□□ -0.6
RPN10YHR200W RKI1Q12189 258 aa11.31□□□□□ -0.6
RPN10YHR200W CDC50P25656 391 aa11.3□□□□□ -0.6
RPN10YHR200W POG1P40473 351 aa11.3□□□□□ -0.6
RPN10YHR200W LST8P41318 303 aa11.3□□□□□ -0.6
RPN10YHR200W YJL163CP46996 555 aa11.3□□□□□ -0.6
RPN10YHR200W MIC27P50945 234 aa11.3□□□□□ -0.6
RPN10YHR200W CRH1P53301 507 aa11.3□□□□□ -0.6
RPN10YHR200W SME1Q12330 94 aaPredicted RBP11.3□□□□□ -0.6
RPN10YHR200W YCL042WP25572 119 aa11.29□□□□□ -0.6
RPN10YHR200W YBL071CP38185 102 aa11.29□□□□□ -0.6
RPN10YHR200W YJR015WP47090 510 aa11.29□□□□□ -0.6
RPN10YHR200W PAU4P53427 120 aa11.29□□□□□ -0.6
RPN10YHR200W YMR317WQ04893 1140 aa11.29□□□□□ -0.6
RPN10YHR200W PAA1Q12447 191 aaKnown RBP11.29□□□□□ -0.6
RPN10YHR200W TDH1P00360 332 aaKnown RBP11.28□□□□□ -0.6
RPN10YHR200W YBL059WP34224 193 aa11.28□□□□□ -0.6
RPN10YHR200W RPL15AP05748 204 aaKnown RBP11.27□□□□□ -0.61
RPN10YHR200W MRS3P10566 314 aa11.27□□□□□ -0.61
RPN10YHR200W ELO2P25358 347 aa11.27□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 77.9 ms