RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC97YHR172W OCA6Q12454 224 aa4.37□□□□□ -1.71
SPC97YHR172W SAS5Q99314 248 aa4.37□□□□□ -1.71
SPC97YHR172W HSL1P34244 1518 aa4.37□□□□□ -1.71
SPC97YHR172W BNR1P40450 1375 aa4.37□□□□□ -1.71
SPC97YHR172W TY1B-HO13535 1793 aa4.37□□□□□ -1.71
SPC97YHR172W YIL177CP40434 1758 aa4.37□□□□□ -1.71
SPC97YHR172W YJL225CP40889 1758 aa4.37□□□□□ -1.71
SPC97YHR172W ERG2P32352 222 aa4.37□□□□□ -1.71
SPC97YHR172W ETR1P38071 380 aa4.37□□□□□ -1.71
SPC97YHR172W CLD1P53264 445 aa4.37□□□□□ -1.71
SPC97YHR172W YLR412C-AQ3E742 68 aa4.37□□□□□ -1.71
SPC97YHR172W TRM3Q07527 1436 aa4.36□□□□□ -1.71
SPC97YHR172W PUB1P32588 453 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
SPC97YHR172W NSG1P38837 291 aa4.36□□□□□ -1.71
SPC97YHR172W AVT2P39981 480 aa4.36□□□□□ -1.71
SPC97YHR172W YGL230CP53074 147 aa4.36□□□□□ -1.71
SPC97YHR172W YDR415CQ04033 374 aaPredicted RBP4.36□□□□□ -1.71
SPC97YHR172W RNH202Q05635 350 aa4.36□□□□□ -1.71
SPC97YHR172W URE2P23202 354 aaKnown RBP4.36□□□□□ -1.71
SPC97YHR172W SPT14P32363 452 aa4.36□□□□□ -1.71
SPC97YHR172W YLR462WO13556 202 aa4.35□□□□□ -1.71
SPC97YHR172W RPL14AP36105 138 aaKnown RBP4.35□□□□□ -1.71
SPC97YHR172W UTP30P36144 274 aaKnown RBP4.35□□□□□ -1.71
SPC97YHR172W RPL14BP38754 138 aaKnown RBP4.35□□□□□ -1.71
SPC97YHR172W SWT21P53873 357 aaPredicted RBP4.35□□□□□ -1.71
SPC97YHR172W SCW10Q04951 389 aa4.35□□□□□ -1.71
SPC97YHR172W YLR042CQ07990 161 aa4.35□□□□□ -1.71
SPC97YHR172W YDL211CQ12121 372 aa4.35□□□□□ -1.71
SPC97YHR172W HUT1Q12520 339 aa4.35□□□□□ -1.71
SPC97YHR172W ATR1P13090 542 aa4.35□□□□□ -1.71
SPC97YHR172W CDC43P18898 376 aa4.35□□□□□ -1.71
SPC97YHR172W YEA6P39953 335 aa4.35□□□□□ -1.71
SPC97YHR172W BUD25P85052 153 aa4.35□□□□□ -1.71
SPC97YHR172W YLR179CQ06252 201 aaKnown RBP4.35□□□□□ -1.71
SPC97YHR172W MEU1Q07938 337 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
SPC97YHR172W NIP7Q08962 181 aaKnown RBP4.35□□□□□ -1.71
SPC97YHR172W YAL063C-AQ3E791 96 aa4.35□□□□□ -1.71
SPC97YHR172W YOR020W-AQ3E824 90 aa4.35□□□□□ -1.71
SPC97YHR172W MYO2P19524 1574 aaKnown RBP4.35□□□□□ -1.71
SPC97YHR172W TRP1P00912 224 aa4.34□□□□□ -1.71
SPC97YHR172W RFS1P38234 210 aaKnown RBP4.34□□□□□ -1.71
SPC97YHR172W SBH1P52870 82 aa4.34□□□□□ -1.71
SPC97YHR172W YGL262WP53054 175 aa4.34□□□□□ -1.71
SPC97YHR172W BGL2P15703 313 aaKnown RBP4.34□□□□□ -1.72
SPC97YHR172W SRL3P36167 246 aa4.34□□□□□ -1.72
SPC97YHR172W RPB11P38902 120 aa4.34□□□□□ -1.72
SPC97YHR172W PTI1P39927 425 aaPredicted RBP4.34□□□□□ -1.72
SPC97YHR172W YNL208WP40159 199 aaKnown RBP4.34□□□□□ -1.72
SPC97YHR172W NCA3P46955 337 aa4.34□□□□□ -1.72
SPC97YHR172W DIE2P50076 525 aa4.34□□□□□ -1.72
SPC97YHR172W YGR015CP53208 328 aa4.34□□□□□ -1.72
SPC97YHR172W EMI1Q04406 187 aa4.34□□□□□ -1.72
SPC97YHR172W RPB3P16370 318 aaKnown RBP4.33□□□□□ -1.72
SPC97YHR172W PRE1P22141 198 aaKnown RBP4.33□□□□□ -1.72
SPC97YHR172W CSE2P33308 149 aa4.33□□□□□ -1.72
SPC97YHR172W YRA2P36036 203 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
SPC97YHR172W YBR090CP38253 122 aa4.33□□□□□ -1.72
SPC97YHR172W AVT6P40074 448 aa4.33□□□□□ -1.72
SPC97YHR172W RPE1P46969 238 aa4.33□□□□□ -1.72
SPC97YHR172W TIM22Q12328 207 aa4.33□□□□□ -1.72
SPC97YHR172W YPR053CQ6Q5F3 151 aa4.33□□□□□ -1.72
SPC97YHR172W YPR170W-BP0C5R9 85 aa4.33□□□□□ -1.72
SPC97YHR172W RPB5P20434 215 aa4.33□□□□□ -1.72
SPC97YHR172W YGL193CP53097 103 aa4.33□□□□□ -1.72
SPC97YHR172W IZH2Q12442 317 aa4.33□□□□□ -1.72
SPC97YHR172W TAD3Q9URQ3 322 aa4.33□□□□□ -1.72
SPC97YHR172W ZRT3P34240 503 aa4.32□□□□□ -1.72
SPC97YHR172W HOT13P36078 116 aa4.32□□□□□ -1.72
SPC97YHR172W SKG1P36169 355 aa4.32□□□□□ -1.72
SPC97YHR172W YJL218WP40892 196 aaKnown RBP4.32□□□□□ -1.72
SPC97YHR172W YJR085CP47131 105 aaKnown RBP4.32□□□□□ -1.72
SPC97YHR172W FMP42Q04991 504 aa4.32□□□□□ -1.72
SPC97YHR172W BET1P22804 142 aa4.32□□□□□ -1.72
SPC97YHR172W SHE1P38200 338 aa4.32□□□□□ -1.72
SPC97YHR172W GON7P46984 123 aa4.32□□□□□ -1.72
SPC97YHR172W RPL42AP0CX27 106 aaKnown RBP4.31□□□□□ -1.72
SPC97YHR172W RPL42BP0CX28 106 aaKnown RBP4.31□□□□□ -1.72
SPC97YHR172W AHT1P29589 182 aa4.31□□□□□ -1.72
SPC97YHR172W DIM1P41819 318 aaKnown RBP4.31□□□□□ -1.72
SPC97YHR172W YJL028WP47062 111 aa4.31□□□□□ -1.72
SPC97YHR172W YMR254CQ04838 102 aa4.31□□□□□ -1.72
SPC97YHR172W SCP1Q08873 200 aa4.31□□□□□ -1.72
SPC97YHR172W YML100W-AQ8TGT0 57 aa4.31□□□□□ -1.72
SPC97YHR172W HYP2P23301 157 aaKnown RBP4.31□□□□□ -1.72
SPC97YHR172W OM14P38325 134 aa4.31□□□□□ -1.72
SPC97YHR172W PFS2P42841 465 aaKnown RBP4.3□□□□□ -1.72
SPC97YHR172W YOL014WQ08110 124 aa4.3□□□□□ -1.72
SPC97YHR172W KRE5P22023 1365 aa4.3□□□□□ -1.72
SPC97YHR172W URA5P13298 226 aaKnown RBP4.3□□□□□ -1.72
SPC97YHR172W PEX4P29340 183 aa4.3□□□□□ -1.72
SPC97YHR172W MSA2P36157 363 aa4.3□□□□□ -1.72
SPC97YHR172W YNL200CP40165 246 aaKnown RBP4.3□□□□□ -1.72
SPC97YHR172W STB1P42845 420 aa4.3□□□□□ -1.72
SPC97YHR172W YFL019CP43576 117 aa4.3□□□□□ -1.72
SPC97YHR172W RSM27P53305 110 aa4.3□□□□□ -1.72
SPC97YHR172W ELC1Q03071 99 aa4.3□□□□□ -1.72
SPC97YHR172W YPL264CQ08980 353 aa4.3□□□□□ -1.72
SPC97YHR172W GTT2Q12390 233 aa4.3□□□□□ -1.72
SPC97YHR172W YCR075W-AQ3E830 75 aa4.3□□□□□ -1.72
SPC97YHR172W SNO3P43544 222 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms