RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W CUE4Q04201 117 aaPredicted RBP6.42□□□□□ -1.38
PEX28YHR150W DPB4Q04603 196 aaKnown RBP6.42□□□□□ -1.38
PEX28YHR150W YLR179CQ06252 201 aaKnown RBP6.42□□□□□ -1.38
PEX28YHR150W YDR157WA0A023PZE8 133 aa6.41□□□□□ -1.38
PEX28YHR150W RPL35AP0CX84 120 aaKnown RBP6.41□□□□□ -1.38
PEX28YHR150W RPL35BP0CX85 120 aaKnown RBP6.41□□□□□ -1.38
PEX28YHR150W COQ3P27680 312 aa6.41□□□□□ -1.38
PEX28YHR150W IMP1P28627 190 aa6.41□□□□□ -1.38
PEX28YHR150W MRPL19P53875 158 aa6.41□□□□□ -1.38
PEX28YHR150W CYT2Q00873 224 aa6.41□□□□□ -1.38
PEX28YHR150W RIM9Q04734 239 aa6.41□□□□□ -1.38
PEX28YHR150W YOR292CQ08743 309 aa6.41□□□□□ -1.38
PEX28YHR150W ATG40Q99325 256 aa6.41□□□□□ -1.38
PEX28YHR150W IRA2P19158 3079 aa6.4□□□□□ -1.38
PEX28YHR150W PAU19P0CE85 124 aa6.4□□□□□ -1.38
PEX28YHR150W PAU21P0CE86 164 aa6.4□□□□□ -1.38
PEX28YHR150W PAU22P0CE87 164 aa6.4□□□□□ -1.38
PEX28YHR150W BGL2P15703 313 aaKnown RBP6.4□□□□□ -1.38
PEX28YHR150W PAU3P25610 124 aa6.4□□□□□ -1.38
PEX28YHR150W SCM4P32564 187 aa6.4□□□□□ -1.38
PEX28YHR150W NTC20P38302 140 aaPredicted RBP6.4□□□□□ -1.38
PEX28YHR150W PCL7P40186 285 aa6.4□□□□□ -1.38
PEX28YHR150W PAU5P43575 122 aa6.4□□□□□ -1.38
PEX28YHR150W GEP7P53171 287 aa6.4□□□□□ -1.38
PEX28YHR150W OCA2P53949 197 aa6.4□□□□□ -1.38
PEX28YHR150W ACS1Q01574 713 aa6.4□□□□□ -1.38
PEX28YHR150W RCE1Q03530 315 aa6.4□□□□□ -1.38
PEX28YHR150W YMR254CQ04838 102 aa6.4□□□□□ -1.38
PEX28YHR150W DAL4Q04895 635 aa6.4□□□□□ -1.38
PEX28YHR150W USV1Q12132 391 aa6.4□□□□□ -1.38
PEX28YHR150W LAS17Q12446 633 aa6.4□□□□□ -1.38
PEX28YHR150W MOH1P38191 138 aa6.39□□□□□ -1.39
PEX28YHR150W YEL057CP39983 233 aa6.39□□□□□ -1.39
PEX28YHR150W YIL029CP40538 142 aa6.39□□□□□ -1.39
PEX28YHR150W OST1P41543 476 aaKnown RBP6.39□□□□□ -1.39
PEX28YHR150W ATG27P46989 271 aa6.39□□□□□ -1.39
PEX28YHR150W TTI2P47168 421 aa6.39□□□□□ -1.39
PEX28YHR150W PIN3Q06449 215 aa6.39□□□□□ -1.39
PEX28YHR150W ERF2Q06551 359 aa6.39□□□□□ -1.39
PEX28YHR150W RAF1Q06891 181 aa6.39□□□□□ -1.39
PEX28YHR150W DCN1Q12395 269 aa6.39□□□□□ -1.39
PEX28YHR150W NHP6AP11632 93 aaKnown RBP6.39□□□□□ -1.39
PEX28YHR150W FCY2P17064 533 aa6.39□□□□□ -1.39
PEX28YHR150W MRPS5P33759 307 aa6.39□□□□□ -1.39
PEX28YHR150W YKL107WP34251 309 aa6.39□□□□□ -1.39
PEX28YHR150W SHB17P36136 271 aaKnown RBP6.39□□□□□ -1.39
PEX28YHR150W MTC6P38849 526 aa6.39□□□□□ -1.39
PEX28YHR150W HSP10P38910 106 aa6.39□□□□□ -1.39
PEX28YHR150W SUR2P38992 349 aa6.39□□□□□ -1.39
PEX28YHR150W YGR269WP40326 108 aa6.39□□□□□ -1.39
PEX28YHR150W XPT1P47165 209 aa6.39□□□□□ -1.39
PEX28YHR150W RIB4P50861 169 aaPredicted RBP6.39□□□□□ -1.39
PEX28YHR150W YGR050CP53231 118 aa6.39□□□□□ -1.39
PEX28YHR150W TMA17Q12513 150 aa6.39□□□□□ -1.39
PEX28YHR150W SEN1Q00416 2231 aaKnown RBP6.38□□□□□ -1.39
PEX28YHR150W RPL7AP05737 244 aaKnown RBP6.38□□□□□ -1.39
PEX28YHR150W URA5P13298 226 aaKnown RBP6.38□□□□□ -1.39
PEX28YHR150W PIG2P40187 538 aa6.38□□□□□ -1.39
PEX28YHR150W HIT1P46973 164 aa6.38□□□□□ -1.39
PEX28YHR150W YGR149WP48236 432 aa6.38□□□□□ -1.39
PEX28YHR150W TAF4P50105 388 aa6.38□□□□□ -1.39
PEX28YHR150W DAD3P69850 94 aa6.38□□□□□ -1.39
PEX28YHR150W YPL077CQ02831 240 aa6.38□□□□□ -1.39
PEX28YHR150W FRQ1Q06389 190 aa6.38□□□□□ -1.39
PEX28YHR150W ARR3Q06598 404 aa6.38□□□□□ -1.39
PEX28YHR150W RPL7BQ12213 244 aaKnown RBP6.38□□□□□ -1.39
PEX28YHR150W YIL134C-AQ45U18 67 aa6.38□□□□□ -1.39
PEX28YHR150W RPS25BP0C0T4 108 aaKnown RBP6.37□□□□□ -1.39
PEX28YHR150W MRPL44P19956 98 aa6.37□□□□□ -1.39
PEX28YHR150W QCR9P22289 66 aa6.37□□□□□ -1.39
PEX28YHR150W QDR3P38227 689 aa6.37□□□□□ -1.39
PEX28YHR150W YER084WP40057 128 aa6.37□□□□□ -1.39
PEX28YHR150W NSA2P40078 261 aaKnown RBP6.37□□□□□ -1.39
PEX28YHR150W LOC1P43586 204 aaPredicted RBP6.37□□□□□ -1.39
PEX28YHR150W LST7P53237 242 aa6.37□□□□□ -1.39
PEX28YHR150W WSC2P53832 503 aa6.37□□□□□ -1.39
PEX28YHR150W YOR352WQ08816 343 aa6.37□□□□□ -1.39
PEX28YHR150W FIT3Q08907 204 aa6.37□□□□□ -1.39
PEX28YHR150W RNH203Q12338 110 aa6.37□□□□□ -1.39
PEX28YHR150W YOP1Q12402 180 aa6.37□□□□□ -1.39
PEX28YHR150W RPS25AQ3E792 108 aaPredicted RBP6.37□□□□□ -1.39
PEX28YHR150W DAL3P32459 195 aa6.36□□□□□ -1.39
PEX28YHR150W PRM5P40476 318 aa6.36□□□□□ -1.39
PEX28YHR150W HCH1P53834 153 aa6.36□□□□□ -1.39
PEX28YHR150W YMR007WQ03675 126 aa6.36□□□□□ -1.39
PEX28YHR150W ARR2Q06597 130 aa6.36□□□□□ -1.39
PEX28YHR150W YOL024WQ08172 172 aa6.36□□□□□ -1.39
PEX28YHR150W MSL5Q12186 476 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
PEX28YHR150W YNR034W-AQ3E841 98 aa6.36□□□□□ -1.39
PEX28YHR150W YBL059WP34224 193 aa6.36□□□□□ -1.39
PEX28YHR150W IRC22P40006 225 aa6.36□□□□□ -1.39
PEX28YHR150W UPS1Q05776 175 aa6.36□□□□□ -1.39
PEX28YHR150W YPR098CQ06089 161 aa6.36□□□□□ -1.39
PEX28YHR150W FOL3Q12676 427 aaPredicted RBP6.36□□□□□ -1.39
PEX28YHR150W FUN14P18411 198 aa6.35□□□□□ -1.39
PEX28YHR150W PRE9P23638 258 aaKnown RBP6.35□□□□□ -1.39
PEX28YHR150W MRPL11P36521 249 aaPredicted RBP6.35□□□□□ -1.39
PEX28YHR150W CUE1P38428 203 aa6.35□□□□□ -1.39
PEX28YHR150W YMR262WP38430 313 aa6.35□□□□□ -1.39
PEX28YHR150W ARP3P47117 449 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 77.6 ms