RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C YPI1P43587 155 aa5.55□□□□□ -1.52
PUP2YGR253C CPR8P53728 308 aa5.55□□□□□ -1.52
PUP2YGR253C SWT21P53873 357 aaPredicted RBP5.55□□□□□ -1.52
PUP2YGR253C ERV25P54837 211 aaKnown RBP5.55□□□□□ -1.52
PUP2YGR253C NRG1Q03125 231 aa5.55□□□□□ -1.52
PUP2YGR253C AGX1P43567 385 aa5.54□□□□□ -1.52
PUP2YGR253C TY1A-MR1Q04215 440 aa5.54□□□□□ -1.52
PUP2YGR253C FSH2Q05015 223 aa5.54□□□□□ -1.52
PUP2YGR253C RRG8Q06109 277 aa5.54□□□□□ -1.52
PUP2YGR253C SYM1Q06563 197 aa5.54□□□□□ -1.52
PUP2YGR253C SCP1Q08873 200 aa5.54□□□□□ -1.52
PUP2YGR253C ATG31Q12421 196 aa5.54□□□□□ -1.52
PUP2YGR253C COS8P38723 381 aa5.53□□□□□ -1.52
PUP2YGR253C YHR122WP38829 231 aa5.53□□□□□ -1.52
PUP2YGR253C YAR068WP39564 161 aa5.53□□□□□ -1.52
PUP2YGR253C AIM20P40451 204 aa5.53□□□□□ -1.52
PUP2YGR253C DFG10P40526 253 aa5.53□□□□□ -1.52
PUP2YGR253C ARP3P47117 449 aaKnown RBP5.53□□□□□ -1.52
PUP2YGR253C SSU72P53538 206 aaPredicted RBP5.53□□□□□ -1.52
PUP2YGR253C TY1A-DR2Q03964 440 aaKnown RBP5.53□□□□□ -1.52
PUP2YGR253C THI74Q04083 370 aa5.53□□□□□ -1.52
PUP2YGR253C YPR013CQ12145 317 aa5.53□□□□□ -1.52
PUP2YGR253C CAP2P13517 287 aa5.52□□□□□ -1.53
PUP2YGR253C POP8P38208 133 aa5.52□□□□□ -1.53
PUP2YGR253C DOG2P38773 246 aa5.52□□□□□ -1.53
PUP2YGR253C DOG1P38774 246 aa5.52□□□□□ -1.53
PUP2YGR253C LSM12P38828 187 aaKnown RBP5.52□□□□□ -1.53
PUP2YGR253C HPA3P39979 161 aa5.52□□□□□ -1.53
PUP2YGR253C JLP2P40206 208 aa5.52□□□□□ -1.53
PUP2YGR253C ALG13P53178 202 aa5.52□□□□□ -1.53
PUP2YGR253C RAD28Q12021 506 aa5.52□□□□□ -1.53
PUP2YGR253C MSH5Q12175 901 aa5.52□□□□□ -1.53
PUP2YGR253C CPR4P25334 318 aa5.51□□□□□ -1.53
PUP2YGR253C LAG1P38703 411 aa5.51□□□□□ -1.53
PUP2YGR253C MIT1P40002 666 aa5.51□□□□□ -1.53
PUP2YGR253C IRC24P40580 263 aa5.51□□□□□ -1.53
PUP2YGR253C RTT103Q05543 409 aa5.51□□□□□ -1.53
PUP2YGR253C RDS3Q06835 107 aaPredicted RBP5.51□□□□□ -1.53
PUP2YGR253C PAM18Q07914 168 aa5.51□□□□□ -1.53
PUP2YGR253C ATG5Q12380 294 aa5.51□□□□□ -1.53
PUP2YGR253C YGL258W-AQ3E740 77 aa5.51□□□□□ -1.53
PUP2YGR253C CYC3P06182 269 aa5.5□□□□□ -1.53
PUP2YGR253C PUP1P25043 261 aa5.5□□□□□ -1.53
PUP2YGR253C YCP4P25349 247 aaKnown RBP5.5□□□□□ -1.53
PUP2YGR253C PAN3P36102 679 aaPredicted RBP5.5□□□□□ -1.53
PUP2YGR253C CDS1P38221 457 aa5.5□□□□□ -1.53
PUP2YGR253C MBA1P38300 278 aa5.5□□□□□ -1.53
PUP2YGR253C SIM1P40472 476 aa5.5□□□□□ -1.53
PUP2YGR253C ARO8P53090 500 aaKnown RBP5.5□□□□□ -1.53
PUP2YGR253C ATG39Q06159 398 aa5.5□□□□□ -1.53
PUP2YGR253C PRM4Q12498 284 aa5.5□□□□□ -1.53
PUP2YGR253C DCP1Q12517 231 aaPredicted RBP5.5□□□□□ -1.53
PUP2YGR253C YBR255C-AQ3E776 120 aa5.5□□□□□ -1.53
PUP2YGR253C MST28P39552 234 aa5.49□□□□□ -1.53
PUP2YGR253C LSM1P47017 172 aaKnown RBP5.49□□□□□ -1.53
PUP2YGR253C AIM25P47140 327 aa5.49□□□□□ -1.53
PUP2YGR253C TDA4P47153 279 aa5.49□□□□□ -1.53
PUP2YGR253C MST27P53176 234 aa5.49□□□□□ -1.53
PUP2YGR253C RXT3Q07458 294 aa5.49□□□□□ -1.53
PUP2YGR253C YOR385WQ08909 290 aa5.49□□□□□ -1.53
PUP2YGR253C HTZ1Q12692 134 aaKnown RBP5.49□□□□□ -1.53
PUP2YGR253C MLF3P32047 452 aa5.48□□□□□ -1.53
PUP2YGR253C RRT1P38192 103 aa5.48□□□□□ -1.53
PUP2YGR253C BFR1P38934 470 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
PUP2YGR253C IES5P40060 125 aa5.48□□□□□ -1.53
PUP2YGR253C YFR035CP43608 114 aa5.48□□□□□ -1.53
PUP2YGR253C IRC18P47056 224 aa5.48□□□□□ -1.53
PUP2YGR253C RPA14P50106 137 aa5.48□□□□□ -1.53
PUP2YGR253C FYV6P53913 173 aa5.48□□□□□ -1.53
PUP2YGR253C COX12Q01519 83 aa5.48□□□□□ -1.53
PUP2YGR253C EST3Q03096 181 aa5.48□□□□□ -1.53
PUP2YGR253C FEX1Q08913 375 aa5.48□□□□□ -1.53
PUP2YGR253C FEX2Q08991 375 aa5.48□□□□□ -1.53
PUP2YGR253C NKP1Q12493 238 aa5.48□□□□□ -1.53
PUP2YGR253C MRS3P10566 314 aa5.47□□□□□ -1.53
PUP2YGR253C URA5P13298 226 aaKnown RBP5.47□□□□□ -1.53
PUP2YGR253C SNU13P39990 126 aaKnown RBP5.47□□□□□ -1.53
PUP2YGR253C GTF1P53260 183 aaPredicted RBP5.47□□□□□ -1.53
PUP2YGR253C OCA2P53949 197 aa5.47□□□□□ -1.53
PUP2YGR253C DYN2Q02647 92 aa5.47□□□□□ -1.53
PUP2YGR253C SPO19Q03029 223 aa5.47□□□□□ -1.53
PUP2YGR253C MCM21Q06675 368 aa5.47□□□□□ -1.53
PUP2YGR253C TIM18Q08749 192 aa5.47□□□□□ -1.53
PUP2YGR253C YOR352WQ08816 343 aa5.47□□□□□ -1.53
PUP2YGR253C AGC1Q12482 902 aa5.47□□□□□ -1.53
PUP2YGR253C POR2P40478 281 aa5.46□□□□□ -1.54
PUP2YGR253C SER2P42941 309 aa5.46□□□□□ -1.54
PUP2YGR253C IES3Q12345 250 aa5.46□□□□□ -1.54
PUP2YGR253C PAA1Q12447 191 aaKnown RBP5.46□□□□□ -1.54
PUP2YGR253C QCR2P07257 368 aa5.45□□□□□ -1.54
PUP2YGR253C YBL071CP38185 102 aa5.45□□□□□ -1.54
PUP2YGR253C ERV15P38312 142 aa5.45□□□□□ -1.54
PUP2YGR253C NSA2P40078 261 aaKnown RBP5.45□□□□□ -1.54
PUP2YGR253C MIC26P50087 233 aa5.45□□□□□ -1.54
PUP2YGR253C CAF16P43569 289 aa5.44□□□□□ -1.54
PUP2YGR253C YGR050CP53231 118 aa5.44□□□□□ -1.54
PUP2YGR253C YAP1802P53309 568 aa5.44□□□□□ -1.54
PUP2YGR253C SMX3P54999 86 aaPredicted RBP5.44□□□□□ -1.54
PUP2YGR253C FMP42Q04991 504 aa5.44□□□□□ -1.54
PUP2YGR253C RTC3P38804 111 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms