RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W SFK1P35735 353 aa1.71□□□□□ -2.14
CBF2YGR140W OPY1P38271 328 aa1.71□□□□□ -2.14
CBF2YGR140W TDA4P47153 279 aa1.71□□□□□ -2.14
CBF2YGR140W CCC1P47818 322 aa1.71□□□□□ -2.14
CBF2YGR140W VMA10P48836 114 aaKnown RBP1.71□□□□□ -2.14
CBF2YGR140W AIF1P52923 378 aa1.71□□□□□ -2.14
CBF2YGR140W THI74Q04083 370 aa1.71□□□□□ -2.14
CBF2YGR140W SPC24Q04477 213 aa1.71□□□□□ -2.14
CBF2YGR140W MCP1Q12106 302 aa1.71□□□□□ -2.14
CBF2YGR140W UBI4P0CG63 381 aaKnown RBP1.71□□□□□ -2.14
CBF2YGR140W NSP1P14907 823 aaKnown RBP1.71□□□□□ -2.14
CBF2YGR140W HSP26P15992 214 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
CBF2YGR140W TKL2P33315 681 aa1.71□□□□□ -2.14
CBF2YGR140W PRE5P40302 234 aaKnown RBP1.71□□□□□ -2.14
CBF2YGR140W DLS1P40366 167 aa1.71□□□□□ -2.14
CBF2YGR140W GON7P46984 123 aa1.71□□□□□ -2.14
CBF2YGR140W SOL1P50278 321 aa1.71□□□□□ -2.14
CBF2YGR140W YDL180WQ12301 547 aa1.71□□□□□ -2.14
CBF2YGR140W YLR412C-AQ3E742 68 aa1.71□□□□□ -2.14
CBF2YGR140W FKS1P38631 1876 aaKnown RBP1.7□□□□□ -2.14
CBF2YGR140W TIM9O74700 87 aa1.7□□□□□ -2.14
CBF2YGR140W MSW1P04803 379 aa1.7□□□□□ -2.14
CBF2YGR140W SGA1P08019 549 aa1.7□□□□□ -2.14
CBF2YGR140W GLR1P41921 483 aaKnown RBP1.7□□□□□ -2.14
CBF2YGR140W YGL193CP53097 103 aa1.7□□□□□ -2.14
CBF2YGR140W YDR391CQ04170 232 aa1.7□□□□□ -2.14
CBF2YGR140W TRM12Q04235 462 aa1.7□□□□□ -2.14
CBF2YGR140W SPG3Q04398 127 aaPredicted RBP1.7□□□□□ -2.14
CBF2YGR140W DAS2Q12084 232 aa1.7□□□□□ -2.14
CBF2YGR140W ATP14Q12349 124 aa1.7□□□□□ -2.14
CBF2YGR140W PSF1Q12488 208 aa1.7□□□□□ -2.14
CBF2YGR140W YHR032W-AP0C5N6 59 aa1.7□□□□□ -2.14
CBF2YGR140W YPL073CP40323 161 aa1.7□□□□□ -2.14
CBF2YGR140W VPS28Q02767 242 aa1.7□□□□□ -2.14
CBF2YGR140W YPD1Q07688 167 aa1.7□□□□□ -2.14
CBF2YGR140W YPR063CQ12160 140 aa1.7□□□□□ -2.14
CBF2YGR140W TRM3Q07527 1436 aa1.69□□□□□ -2.14
CBF2YGR140W RPC19P28000 142 aaKnown RBP1.69□□□□□ -2.14
CBF2YGR140W PTC1P35182 281 aa1.69□□□□□ -2.14
CBF2YGR140W PRS3P38689 320 aaKnown RBP1.69□□□□□ -2.14
CBF2YGR140W YIR035CP40579 254 aa1.69□□□□□ -2.14
CBF2YGR140W TTI2P47168 421 aa1.69□□□□□ -2.14
CBF2YGR140W GRX5Q02784 150 aa1.69□□□□□ -2.14
CBF2YGR140W VPS71Q03433 280 aa1.69□□□□□ -2.14
CBF2YGR140W YMR295CQ03559 197 aa1.69□□□□□ -2.14
CBF2YGR140W MRPS8Q03799 155 aa1.69□□□□□ -2.14
CBF2YGR140W YAR023CD6VPM8 179 aa1.69□□□□□ -2.14
CBF2YGR140W REP2P03872 296 aa1.69□□□□□ -2.14
CBF2YGR140W CPR5P35176 225 aa1.69□□□□□ -2.14
CBF2YGR140W SHE2P36068 246 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
CBF2YGR140W UTH1P36135 365 aa1.69□□□□□ -2.14
CBF2YGR140W SBH1P52870 82 aa1.69□□□□□ -2.14
CBF2YGR140W APJ1P53940 528 aa1.69□□□□□ -2.14
CBF2YGR140W YDR366CP87287 132 aa1.69□□□□□ -2.14
CBF2YGR140W COF1Q03048 143 aaKnown RBP1.69□□□□□ -2.14
CBF2YGR140W AKR2Q12013 749 aa1.69□□□□□ -2.14
CBF2YGR140W FCY1Q12178 158 aa1.69□□□□□ -2.14
CBF2YGR140W YOL085CQ99345 113 aa1.69□□□□□ -2.14
CBF2YGR140W RAD50P12753 1312 aa1.69□□□□□ -2.14
CBF2YGR140W ADH1P00330 348 aaKnown RBP1.69□□□□□ -2.14
CBF2YGR140W TIR1P10863 254 aa1.69□□□□□ -2.14
CBF2YGR140W SNC2P33328 115 aa1.69□□□□□ -2.14
CBF2YGR140W FMP23P38231 175 aa1.69□□□□□ -2.14
CBF2YGR140W YMR099CQ03161 297 aaKnown RBP1.69□□□□□ -2.14
CBF2YGR140W FMN1Q03778 218 aa1.69□□□□□ -2.14
CBF2YGR140W TMC1Q08422 150 aaPredicted RBP1.69□□□□□ -2.14
CBF2YGR140W RIB3Q99258 208 aa1.69□□□□□ -2.14
CBF2YGR140W ATP5P09457 212 aa1.68□□□□□ -2.14
CBF2YGR140W ATP15P21306 62 aa1.68□□□□□ -2.14
CBF2YGR140W TOM40P23644 387 aaKnown RBP1.68□□□□□ -2.14
CBF2YGR140W YHL026CP38740 315 aa1.68□□□□□ -2.14
CBF2YGR140W YIL059CP40520 121 aa1.68□□□□□ -2.14
CBF2YGR140W YFR054CP43622 192 aa1.68□□□□□ -2.14
CBF2YGR140W YGR039WP53225 103 aa1.68□□□□□ -2.14
CBF2YGR140W YDR274CP87283 123 aa1.68□□□□□ -2.14
CBF2YGR140W FRQ1Q06389 190 aa1.68□□□□□ -2.14
CBF2YGR140W PRP11Q07350 266 aaPredicted RBP1.68□□□□□ -2.14
CBF2YGR140W SRP21P32342 167 aa1.68□□□□□ -2.14
CBF2YGR140W MRPL17P36528 281 aa1.68□□□□□ -2.14
CBF2YGR140W PGD1P40356 397 aa1.68□□□□□ -2.14
CBF2YGR140W CUP9P41817 306 aa1.68□□□□□ -2.14
CBF2YGR140W YFL019CP43576 117 aa1.68□□□□□ -2.14
CBF2YGR140W ORM1P53224 222 aa1.68□□□□□ -2.14
CBF2YGR140W FCF1Q05498 189 aaPredicted RBP1.68□□□□□ -2.14
CBF2YGR140W YOR214CQ12282 236 aa1.68□□□□□ -2.14
CBF2YGR140W BOL1Q3E793 110 aa1.68□□□□□ -2.14
CBF2YGR140W ODC2Q99297 307 aa1.68□□□□□ -2.14
CBF2YGR140W Q0144Q9ZZW2 109 aa1.68□□□□□ -2.14
CBF2YGR140W RAD6P06104 172 aa1.67□□□□□ -2.14
CBF2YGR140W GVP36P40531 326 aaKnown RBP1.67□□□□□ -2.14
CBF2YGR140W YFR045WP43617 309 aa1.67□□□□□ -2.14
CBF2YGR140W GPI2P46961 280 aa1.67□□□□□ -2.14
CBF2YGR140W SNX4P47057 423 aa1.67□□□□□ -2.14
CBF2YGR140W APS3P47064 194 aa1.67□□□□□ -2.14
CBF2YGR140W EAF6P47128 113 aa1.67□□□□□ -2.14
CBF2YGR140W RSM10Q03201 203 aa1.67□□□□□ -2.14
CBF2YGR140W CNL1Q06333 122 aa1.67□□□□□ -2.14
CBF2YGR140W SPA2P23201 1466 aaKnown RBP1.67□□□□□ -2.14
CBF2YGR140W SCL1P21243 252 aaKnown RBP1.67□□□□□ -2.14
CBF2YGR140W MRPL24P36525 258 aaPredicted RBP1.67□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms