RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W YOR289WQ12012 251 aaPredicted RBP2.27□□□□□ -2.05
PRP18YGR006W WIP1Q2V2P8 89 aa2.27□□□□□ -2.05
PRP18YGR006W YDL085C-AQ3E7B7 68 aaKnown RBP2.27□□□□□ -2.05
PRP18YGR006W YHR214C-EQ8TGK0 99 aa2.27□□□□□ -2.05
PRP18YGR006W RIB3Q99258 208 aa2.27□□□□□ -2.05
PRP18YGR006W TY1B-HO13535 1793 aa2.27□□□□□ -2.05
PRP18YGR006W RPL25P04456 142 aaKnown RBP2.26□□□□□ -2.05
PRP18YGR006W OCH1P31755 480 aa2.26□□□□□ -2.05
PRP18YGR006W FAR7P43592 221 aa2.26□□□□□ -2.05
PRP18YGR006W ERV29P53337 310 aa2.26□□□□□ -2.05
PRP18YGR006W UBC7Q02159 165 aa2.26□□□□□ -2.05
PRP18YGR006W YMD8Q03697 442 aa2.26□□□□□ -2.05
PRP18YGR006W CSN9Q03981 162 aa2.26□□□□□ -2.05
PRP18YGR006W PLP1Q04004 230 aa2.26□□□□□ -2.05
PRP18YGR006W HPT1Q04178 221 aaKnown RBP2.26□□□□□ -2.05
PRP18YGR006W SHH4Q06236 168 aa2.26□□□□□ -2.05
PRP18YGR006W YLR046CQ12253 270 aa2.26□□□□□ -2.05
PRP18YGR006W MSW1P04803 379 aa2.25□□□□□ -2.05
PRP18YGR006W SNF4P12904 322 aa2.25□□□□□ -2.05
PRP18YGR006W AHC2P25649 128 aa2.25□□□□□ -2.05
PRP18YGR006W HMF1P40037 129 aaKnown RBP2.25□□□□□ -2.05
PRP18YGR006W ALB1P47019 175 aaPredicted RBP2.25□□□□□ -2.05
PRP18YGR006W RBL2P48606 106 aaKnown RBP2.25□□□□□ -2.05
PRP18YGR006W YGR219WP53307 113 aa2.25□□□□□ -2.05
PRP18YGR006W FRQ1Q06389 190 aa2.25□□□□□ -2.05
PRP18YGR006W ATO3Q12359 275 aa2.25□□□□□ -2.05
PRP18YGR006W PDR18P53756 1333 aa2.24□□□□□ -2.05
PRP18YGR006W YHR139C-AO13536 103 aa2.24□□□□□ -2.05
PRP18YGR006W RPL2AP0CX45 254 aaKnown RBP2.24□□□□□ -2.05
PRP18YGR006W RPL2BP0CX46 254 aaKnown RBP2.24□□□□□ -2.05
PRP18YGR006W RPS1AP33442 255 aaKnown RBP2.24□□□□□ -2.05
PRP18YGR006W YJL027CP47063 138 aaPredicted RBP2.24□□□□□ -2.05
PRP18YGR006W SOL1P50278 321 aa2.24□□□□□ -2.05
PRP18YGR006W TIM8P57744 87 aa2.24□□□□□ -2.05
PRP18YGR006W FMN1Q03778 218 aa2.24□□□□□ -2.05
PRP18YGR006W NEJ1Q06148 342 aa2.24□□□□□ -2.05
PRP18YGR006W DGA1Q08650 418 aa2.24□□□□□ -2.05
PRP18YGR006W PST2Q12335 198 aaKnown RBP2.24□□□□□ -2.05
PRP18YGR006W SLO1Q3E784 85 aa2.24□□□□□ -2.05
PRP18YGR006W SSN2P38931 1420 aa2.24□□□□□ -2.05
PRP18YGR006W MBF1O14467 151 aaKnown RBP2.23□□□□□ -2.05
PRP18YGR006W PBI2P0CT04 75 aaKnown RBP2.23□□□□□ -2.05
PRP18YGR006W PEX4P29340 183 aa2.23□□□□□ -2.05
PRP18YGR006W YKL102CP34249 101 aa2.23□□□□□ -2.05
PRP18YGR006W FMP23P38231 175 aa2.23□□□□□ -2.05
PRP18YGR006W HPM1P40481 377 aa2.23□□□□□ -2.05
PRP18YGR006W GLC8P41818 229 aa2.23□□□□□ -2.05
PRP18YGR006W MRPS8Q03799 155 aa2.23□□□□□ -2.05
PRP18YGR006W GPI17Q04080 534 aa2.23□□□□□ -2.05
PRP18YGR006W YIR021W-AQ3E739 70 aa2.23□□□□□ -2.05
PRP18YGR006W BUD4P47136 1447 aa2.23□□□□□ -2.05
PRP18YGR006W KIN28P06242 306 aa2.22□□□□□ -2.05
PRP18YGR006W CDC7P06243 507 aa2.22□□□□□ -2.05
PRP18YGR006W MAG1P22134 296 aaKnown RBP2.22□□□□□ -2.05
PRP18YGR006W YCR101CP25607 182 aa2.22□□□□□ -2.05
PRP18YGR006W TFC1P32367 649 aa2.22□□□□□ -2.05
PRP18YGR006W GSP1P32835 219 aaKnown RBP2.22□□□□□ -2.05
PRP18YGR006W GSP2P32836 220 aaKnown RBP2.22□□□□□ -2.05
PRP18YGR006W TVP38P36164 337 aa2.22□□□□□ -2.05
PRP18YGR006W OPY1P38271 328 aa2.22□□□□□ -2.05
PRP18YGR006W AST2P39945 430 aaKnown RBP2.22□□□□□ -2.05
PRP18YGR006W YEA4P40004 342 aa2.22□□□□□ -2.05
PRP18YGR006W FCY21P40039 528 aa2.22□□□□□ -2.05
PRP18YGR006W ERJ5P43613 295 aaPredicted RBP2.22□□□□□ -2.05
PRP18YGR006W CIS3P47001 227 aa2.22□□□□□ -2.05
PRP18YGR006W ARO8P53090 500 aaKnown RBP2.22□□□□□ -2.05
PRP18YGR006W YGR050CP53231 118 aa2.22□□□□□ -2.05
PRP18YGR006W YNL010WP53981 241 aaKnown RBP2.22□□□□□ -2.05
PRP18YGR006W LSM3P57743 89 aaKnown RBP2.22□□□□□ -2.05
PRP18YGR006W HHT1P61830 136 aa2.22□□□□□ -2.05
PRP18YGR006W ARL3Q02804 198 aa2.22□□□□□ -2.05
PRP18YGR006W SDH7Q04401 133 aa2.22□□□□□ -2.05
PRP18YGR006W YDR278CQ05612 105 aa2.22□□□□□ -2.05
PRP18YGR006W PRP11Q07350 266 aaPredicted RBP2.22□□□□□ -2.05
PRP18YGR006W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
PRP18YGR006W YHR086W-AQ3E746 53 aa2.22□□□□□ -2.05
PRP18YGR006W TSC3Q3E790 80 aa2.22□□□□□ -2.05
PRP18YGR006W BOL1Q3E793 110 aa2.22□□□□□ -2.05
PRP18YGR006W HSL1P34244 1518 aa2.22□□□□□ -2.05
PRP18YGR006W UBI4P0CG63 381 aaKnown RBP2.21□□□□□ -2.06
PRP18YGR006W SCL1P21243 252 aaKnown RBP2.21□□□□□ -2.06
PRP18YGR006W POP4P38336 279 aa2.21□□□□□ -2.06
PRP18YGR006W APQ12P40532 138 aa2.21□□□□□ -2.06
PRP18YGR006W GPI14P47088 403 aaKnown RBP2.21□□□□□ -2.06
PRP18YGR006W YGL101WP53144 215 aa2.21□□□□□ -2.06
PRP18YGR006W RUB1Q03919 77 aa2.21□□□□□ -2.06
PRP18YGR006W TRM12Q04235 462 aa2.21□□□□□ -2.06
PRP18YGR006W YMR320WQ04897 101 aa2.21□□□□□ -2.06
PRP18YGR006W HRD1Q08109 551 aa2.21□□□□□ -2.06
PRP18YGR006W DAS2Q12084 232 aa2.21□□□□□ -2.06
PRP18YGR006W YOR342CQ12182 319 aa2.21□□□□□ -2.06
PRP18YGR006W YPR014CQ6B0W2 109 aa2.21□□□□□ -2.06
PRP18YGR006W YPR170W-BP0C5R9 85 aa2.2□□□□□ -2.06
PRP18YGR006W RPL30P14120 105 aaKnown RBP2.2□□□□□ -2.06
PRP18YGR006W PHO88P38264 188 aaPredicted RBP2.2□□□□□ -2.06
PRP18YGR006W ERV15P38312 142 aa2.2□□□□□ -2.06
PRP18YGR006W IRC22P40006 225 aa2.2□□□□□ -2.06
PRP18YGR006W RGI1P40043 161 aaPredicted RBP2.2□□□□□ -2.06
PRP18YGR006W ARP3P47117 449 aaKnown RBP2.2□□□□□ -2.06
PRP18YGR006W ERG25P53045 309 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 80.2 ms