RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS52	YDR484W	YMR007W	Q03675	126 aa		0.89	□□□□□ -2.27
VPS52	YDR484W	MRS1	P07266	363 aa		0.89	□□□□□ -2.27
VPS52	YDR484W	MATALPHA2	P0CY08	210 aa		0.89	□□□□□ -2.27
VPS52	YDR484W	HMLALPHA2	P0CY09	210 aa		0.89	□□□□□ -2.27
VPS52	YDR484W	YKT6	P36015	200 aa	Known RBP	0.89	□□□□□ -2.27
VPS52	YDR484W	YEL067C	P39978	195 aa		0.89	□□□□□ -2.27
VPS52	YDR484W	SOK1	P40317	901 aa		0.89	□□□□□ -2.27
VPS52	YDR484W	HYR1	P40581	163 aa	Known RBP	0.89	□□□□□ -2.27
VPS52	YDR484W	CGR1	P53188	120 aa		0.89	□□□□□ -2.27
VPS52	YDR484W	YLR031W	Q07978	186 aa		0.89	□□□□□ -2.27
VPS52	YDR484W	ABP140	Q08641	628 aa	Known RBP	0.89	□□□□□ -2.27
VPS52	YDR484W	YAR023C	D6VPM8	179 aa		0.88	□□□□□ -2.27
VPS52	YDR484W	YFL065C	P43539	102 aa		0.88	□□□□□ -2.27
VPS52	YDR484W	ARP3	P47117	449 aa	Known RBP	0.88	□□□□□ -2.27
VPS52	YDR484W	DAD4	P69851	72 aa		0.88	□□□□□ -2.27
VPS52	YDR484W	CWC21	Q03375	135 aa	Known RBP	0.88	□□□□□ -2.27
VPS52	YDR484W	YLR036C	Q07986	203 aa		0.88	□□□□□ -2.27
VPS52	YDR484W	AQY2	P0CD90	149 aa		0.87	□□□□□ -2.27
VPS52	YDR484W	YFH7	P43591	353 aa		0.87	□□□□□ -2.27
VPS52	YDR484W	UBC12	P52491	188 aa		0.87	□□□□□ -2.27
VPS52	YDR484W	YMR099C	Q03161	297 aa	Known RBP	0.87	□□□□□ -2.27
VPS52	YDR484W	SHH3	Q04487	196 aa		0.87	□□□□□ -2.27
VPS52	YDR484W	PRP11	Q07350	266 aa	Predicted RBP	0.87	□□□□□ -2.27
VPS52	YDR484W	IRC23	Q08416	157 aa		0.87	□□□□□ -2.27
VPS52	YDR484W	YCL012C	Q8J0M4	134 aa		0.87	□□□□□ -2.27
VPS52	YDR484W	MTW1	P39731	289 aa		0.87	□□□□□ -2.27
VPS52	YDR484W	GET4	Q12125	312 aa		0.87	□□□□□ -2.27
VPS52	YDR484W	HPA3	P39979	161 aa		0.86	□□□□□ -2.27
VPS52	YDR484W	YOL014W	Q08110	124 aa		0.86	□□□□□ -2.27
VPS52	YDR484W	IGO2	Q9P305	131 aa		0.86	□□□□□ -2.27
VPS52	YDR484W	QCR7	P00128	127 aa		0.85	□□□□□ -2.27
VPS52	YDR484W	SNF4	P12904	322 aa		0.85	□□□□□ -2.27
VPS52	YDR484W	PHO85	P17157	305 aa		0.85	□□□□□ -2.27
VPS52	YDR484W	YHL018W	P38744	120 aa	Predicted RBP	0.85	□□□□□ -2.27
VPS52	YDR484W	TDA4	P47153	279 aa		0.85	□□□□□ -2.27
VPS52	YDR484W	RPL37A	P49166	88 aa	Known RBP	0.85	□□□□□ -2.27
VPS52	YDR484W	NOP19	P53317	196 aa	Predicted RBP	0.85	□□□□□ -2.27
VPS52	YDR484W	YMR252C	Q04814	134 aa		0.85	□□□□□ -2.27
VPS52	YDR484W	YMR315W	Q04869	349 aa	Known RBP	0.85	□□□□□ -2.27
VPS52	YDR484W	YPR013C	Q12145	317 aa		0.85	□□□□□ -2.27
VPS52	YDR484W	YML100W-A	Q8TGT0	57 aa		0.85	□□□□□ -2.27
VPS52	YDR484W	COX8	P04039	78 aa		0.85	□□□□□ -2.27
VPS52	YDR484W	YHR212W-A	P0CX91	67 aa		0.85	□□□□□ -2.27
VPS52	YDR484W	NSP1	P14907	823 aa	Known RBP	0.85	□□□□□ -2.27
VPS52	YDR484W	MGT1	P26188	188 aa		0.85	□□□□□ -2.27
VPS52	YDR484W	SFK1	P35735	353 aa		0.85	□□□□□ -2.27
VPS52	YDR484W	PDS1	P40316	373 aa	Predicted RBP	0.85	□□□□□ -2.27
VPS52	YDR484W	CUP9	P41817	306 aa		0.85	□□□□□ -2.27
VPS52	YDR484W	TMA22	P47089	198 aa	Predicted RBP	0.85	□□□□□ -2.27
VPS52	YDR484W	RTC4	P53850	401 aa		0.85	□□□□□ -2.27
VPS52	YDR484W	YNL184C	P53876	108 aa		0.85	□□□□□ -2.27
VPS52	YDR484W	ADF1	Q2V2Q1	113 aa		0.85	□□□□□ -2.27
VPS52	YDR484W	JIP3	O13555	125 aa		0.84	□□□□□ -2.27
VPS52	YDR484W	ARO7	P32178	256 aa		0.84	□□□□□ -2.27
VPS52	YDR484W	RPB7	P34087	171 aa		0.84	□□□□□ -2.27
VPS52	YDR484W	YJR111C	P47148	283 aa	Known RBP	0.84	□□□□□ -2.27
VPS52	YDR484W	RNH202	Q05635	350 aa		0.84	□□□□□ -2.27
VPS52	YDR484W	RPS24A	P0CX31	135 aa	Known RBP	0.83	□□□□□ -2.28
VPS52	YDR484W	RPS24B	P0CX32	135 aa	Known RBP	0.83	□□□□□ -2.28
VPS52	YDR484W	TIR1	P10863	254 aa		0.83	□□□□□ -2.28
VPS52	YDR484W	PAM17	P36147	197 aa		0.83	□□□□□ -2.28
VPS52	YDR484W	THG1	P53215	237 aa	Known RBP	0.83	□□□□□ -2.28
VPS52	YDR484W	UPS3	Q04006	179 aa		0.83	□□□□□ -2.28
VPS52	YDR484W	ARO80	Q04052	950 aa		0.83	□□□□□ -2.28
VPS52	YDR484W	SLH1	P53327	1967 aa	Known RBP	0.83	□□□□□ -2.28
VPS52	YDR484W	GSP2	P32836	220 aa	Known RBP	0.83	□□□□□ -2.28
VPS52	YDR484W	HUA1	P40325	198 aa		0.83	□□□□□ -2.28
VPS52	YDR484W	ALB1	P47019	175 aa	Predicted RBP	0.83	□□□□□ -2.28
VPS52	YDR484W	YNL033W	P53964	284 aa		0.83	□□□□□ -2.28
VPS52	YDR484W	VPS71	Q03433	280 aa		0.83	□□□□□ -2.28
VPS52	YDR484W	NAT3	Q06504	195 aa		0.83	□□□□□ -2.28
VPS52	YDR484W	YOL024W	Q08172	172 aa		0.83	□□□□□ -2.28
VPS52	YDR484W	FIT2	Q08906	153 aa		0.83	□□□□□ -2.28
VPS52	YDR484W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.83	□□□□□ -2.28
VPS52	YDR484W	YMR253C	Q04835	414 aa		0.82	□□□□□ -2.28
VPS52	YDR484W	YPR014C	Q6B0W2	109 aa		0.82	□□□□□ -2.28
VPS52	YDR484W	IDP1	P21954	428 aa	Known RBP	0.81	□□□□□ -2.28
VPS52	YDR484W	CAF4	P36130	643 aa		0.81	□□□□□ -2.28
VPS52	YDR484W	FMP23	P38231	175 aa		0.81	□□□□□ -2.28
VPS52	YDR484W	YEL008W	P40001	126 aa		0.81	□□□□□ -2.28
VPS52	YDR484W	SPC25	P40014	221 aa		0.81	□□□□□ -2.28
VPS52	YDR484W	YCL042W	P25572	119 aa		0.81	□□□□□ -2.28
VPS52	YDR484W	YFL019C	P43576	117 aa		0.81	□□□□□ -2.28
VPS52	YDR484W	TAH1	P25638	111 aa	Predicted RBP	0.8	□□□□□ -2.28
VPS52	YDR484W	NSG1	P38837	291 aa		0.8	□□□□□ -2.28
VPS52	YDR484W	YLR412C-A	Q3E742	68 aa		0.8	□□□□□ -2.28
VPS52	YDR484W	COA3	Q3E7B2	85 aa		0.8	□□□□□ -2.28
VPS52	YDR484W	RAD9	P14737	1309 aa		0.8	□□□□□ -2.28
VPS52	YDR484W	YCR023C	P25351	611 aa		0.79	□□□□□ -2.28
VPS52	YDR484W	TRX3	P25372	127 aa		0.79	□□□□□ -2.28
VPS52	YDR484W	STP22	P25604	385 aa		0.79	□□□□□ -2.28
VPS52	YDR484W	RPL37B	P51402	88 aa	Known RBP	0.79	□□□□□ -2.28
VPS52	YDR484W	PGA1	P53896	198 aa		0.79	□□□□□ -2.28
VPS52	YDR484W	YLR460C	P54007	376 aa		0.79	□□□□□ -2.28
VPS52	YDR484W	GRX5	Q02784	150 aa		0.79	□□□□□ -2.28
VPS52	YDR484W	NOC4	Q06512	552 aa	Predicted RBP	0.79	□□□□□ -2.28
VPS52	YDR484W	YOR015W	Q12169	119 aa		0.79	□□□□□ -2.28
VPS52	YDR484W	YOR342C	Q12182	319 aa		0.79	□□□□□ -2.28
VPS52	YDR484W	ADE1	P27616	306 aa		0.79	□□□□□ -2.28
VPS52	YDR484W	NSA2	P40078	261 aa	Known RBP	0.79	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms