RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W TDH3P00359 332 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
SNX41YDR425W GEX1P25596 615 aa2.07□□□□□ -2.08
SNX41YDR425W ADK2P26364 225 aa2.07□□□□□ -2.08
SNX41YDR425W CWP1P28319 239 aa2.07□□□□□ -2.08
SNX41YDR425W PRY2P36110 329 aa2.07□□□□□ -2.08
SNX41YDR425W ECM34P38728 170 aa2.07□□□□□ -2.08
SNX41YDR425W YHR127WP38833 243 aaKnown RBP2.07□□□□□ -2.08
SNX41YDR425W WSS1P38838 269 aa2.07□□□□□ -2.08
SNX41YDR425W MNL1P38888 796 aa2.07□□□□□ -2.08
SNX41YDR425W YEA6P39953 335 aa2.07□□□□□ -2.08
SNX41YDR425W YEA4P40004 342 aa2.07□□□□□ -2.08
SNX41YDR425W SMB1P40018 196 aaKnown RBP2.07□□□□□ -2.08
SNX41YDR425W SAS2P40963 338 aa2.07□□□□□ -2.08
SNX41YDR425W WWM1P43582 211 aaKnown RBP2.07□□□□□ -2.08
SNX41YDR425W YGL204CP53089 101 aa2.07□□□□□ -2.08
SNX41YDR425W CDH1P53197 566 aa2.07□□□□□ -2.08
SNX41YDR425W MTM1P53320 366 aa2.07□□□□□ -2.08
SNX41YDR425W YNR066CP53752 436 aa2.07□□□□□ -2.08
SNX41YDR425W ALG9P53868 555 aaKnown RBP2.07□□□□□ -2.08
SNX41YDR425W CCE1Q03702 353 aa2.07□□□□□ -2.08
SNX41YDR425W YML018CQ03730 393 aa2.07□□□□□ -2.08
SNX41YDR425W HNT1Q04344 158 aaKnown RBP2.07□□□□□ -2.08
SNX41YDR425W MSC3Q05812 728 aa2.07□□□□□ -2.08
SNX41YDR425W YLR012CQ07927 99 aa2.07□□□□□ -2.08
SNX41YDR425W COQ10Q08058 207 aa2.07□□□□□ -2.08
SNX41YDR425W YOP1Q12402 180 aa2.07□□□□□ -2.08
SNX41YDR425W PET20Q99373 253 aa2.07□□□□□ -2.08
SNX41YDR425W YPR170W-BP0C5R9 85 aa2.06□□□□□ -2.08
SNX41YDR425W RPS8AP0CX39 200 aaKnown RBP2.06□□□□□ -2.08
SNX41YDR425W RPS8BP0CX40 200 aaKnown RBP2.06□□□□□ -2.08
SNX41YDR425W NHP6AP11632 93 aaKnown RBP2.06□□□□□ -2.08
SNX41YDR425W DAL80P26343 269 aa2.06□□□□□ -2.08
SNX41YDR425W TRR1P29509 319 aaKnown RBP2.06□□□□□ -2.08
SNX41YDR425W RRN10P38204 145 aa2.06□□□□□ -2.08
SNX41YDR425W RPF1P38805 295 aaKnown RBP2.06□□□□□ -2.08
SNX41YDR425W HEM14P40012 539 aa2.06□□□□□ -2.08
SNX41YDR425W AVT7P40501 490 aa2.06□□□□□ -2.08
SNX41YDR425W CDC40P40968 455 aaPredicted RBP2.06□□□□□ -2.08
SNX41YDR425W EAF6P47128 113 aa2.06□□□□□ -2.08
SNX41YDR425W BXI1P48558 297 aa2.06□□□□□ -2.08
SNX41YDR425W THG1P53215 237 aaKnown RBP2.06□□□□□ -2.08
SNX41YDR425W PDR16P53860 351 aaKnown RBP2.06□□□□□ -2.08
SNX41YDR425W YNL134CP53912 376 aaKnown RBP2.06□□□□□ -2.08
SNX41YDR425W RCE1Q03530 315 aa2.06□□□□□ -2.08
SNX41YDR425W YDR248CQ03786 193 aa2.06□□□□□ -2.08
SNX41YDR425W CAB5Q03941 241 aa2.06□□□□□ -2.08
SNX41YDR425W NAT4Q04751 285 aa2.06□□□□□ -2.08
SNX41YDR425W FSH2Q05015 223 aa2.06□□□□□ -2.08
SNX41YDR425W MCH1Q07376 486 aa2.06□□□□□ -2.08
SNX41YDR425W YCT1Q12235 531 aa2.06□□□□□ -2.08
SNX41YDR425W SAL1D6W196 494 aa2.05□□□□□ -2.08
SNX41YDR425W MSW1P04803 379 aa2.05□□□□□ -2.08
SNX41YDR425W POR1P04840 283 aaKnown RBP2.05□□□□□ -2.08
SNX41YDR425W POX1P13711 748 aa2.05□□□□□ -2.08
SNX41YDR425W RPB5P20434 215 aa2.05□□□□□ -2.08
SNX41YDR425W CPR2P23285 205 aa2.05□□□□□ -2.08
SNX41YDR425W UTR5P32630 166 aa2.05□□□□□ -2.08
SNX41YDR425W IML3P38265 245 aa2.05□□□□□ -2.08
SNX41YDR425W SLM6P38343 150 aa2.05□□□□□ -2.08
SNX41YDR425W YBR292CP38357 123 aa2.05□□□□□ -2.08
SNX41YDR425W YHL026CP38740 315 aa2.05□□□□□ -2.08
SNX41YDR425W GIM4P40005 111 aaKnown RBP2.05□□□□□ -2.08
SNX41YDR425W APQ12P40532 138 aa2.05□□□□□ -2.08
SNX41YDR425W NCA3P46955 337 aa2.05□□□□□ -2.08
SNX41YDR425W TRM9P49957 279 aa2.05□□□□□ -2.08
SNX41YDR425W RIB4P50861 169 aaPredicted RBP2.05□□□□□ -2.08
SNX41YDR425W SSU72P53538 206 aaPredicted RBP2.05□□□□□ -2.08
SNX41YDR425W RHO3Q00245 231 aaKnown RBP2.05□□□□□ -2.08
SNX41YDR425W DIG2Q03373 323 aaKnown RBP2.05□□□□□ -2.08
SNX41YDR425W TSA2Q04120 196 aa2.05□□□□□ -2.08
SNX41YDR425W ROY1Q04847 553 aa2.05□□□□□ -2.08
SNX41YDR425W YPR114WQ06107 315 aa2.05□□□□□ -2.08
SNX41YDR425W ATG39Q06159 398 aa2.05□□□□□ -2.08
SNX41YDR425W ATG10Q07879 167 aa2.05□□□□□ -2.08
SNX41YDR425W YLR030WQ07967 263 aa2.05□□□□□ -2.08
SNX41YDR425W PAU23Q07987 124 aa2.05□□□□□ -2.08
SNX41YDR425W TPT1Q12272 230 aaKnown RBP2.05□□□□□ -2.08
SNX41YDR425W SME1Q12330 94 aaPredicted RBP2.05□□□□□ -2.08
SNX41YDR425W PAU17Q12370 124 aa2.05□□□□□ -2.08
SNX41YDR425W ORT1Q12375 292 aa2.05□□□□□ -2.08
SNX41YDR425W YPR064WQ12492 139 aa2.05□□□□□ -2.08
SNX41YDR425W QCR2P07257 368 aa2.05□□□□□ -2.08
SNX41YDR425W TCA17P32613 152 aa2.05□□□□□ -2.08
SNX41YDR425W AGA2P32781 87 aa2.05□□□□□ -2.08
SNX41YDR425W MNS1P32906 549 aa2.05□□□□□ -2.08
SNX41YDR425W MDL1P33310 695 aa2.05□□□□□ -2.08
SNX41YDR425W DAD2P36162 133 aa2.05□□□□□ -2.08
SNX41YDR425W HMT1P38074 348 aa2.05□□□□□ -2.08
SNX41YDR425W YBR220CP38318 560 aa2.05□□□□□ -2.08
SNX41YDR425W HSP10P38910 106 aa2.05□□□□□ -2.08
SNX41YDR425W GGC1P38988 300 aa2.05□□□□□ -2.08
SNX41YDR425W LYS1P38998 373 aaRIP-Chip data2.05□□□□□ -2.08not detected
SNX41YDR425W BTT1P40314 149 aaPredicted RBP2.05□□□□□ -2.08
SNX41YDR425W ZIM17P42844 174 aa2.05□□□□□ -2.08
SNX41YDR425W HIT1P46973 164 aa2.05□□□□□ -2.08
SNX41YDR425W EMC4P53073 190 aa2.05□□□□□ -2.08
SNX41YDR425W FLC3P53121 802 aa2.05□□□□□ -2.08
SNX41YDR425W PAU4P53427 120 aa2.05□□□□□ -2.08
SNX41YDR425W HHT1P61830 136 aa2.05□□□□□ -2.08
SNX41YDR425W PIR1Q03178 341 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms