RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W STD1Q02794 444 aa3.18□□□□□ -1.9
SPT3YDR392W MIX17Q03667 156 aa3.18□□□□□ -1.9
SPT3YDR392W YMD8Q03697 442 aa3.18□□□□□ -1.9
SPT3YDR392W YMR130WQ04223 302 aa3.18□□□□□ -1.9
SPT3YDR392W SCP1Q08873 200 aa3.18□□□□□ -1.9
SPT3YDR392W SPC3Q12133 184 aa3.18□□□□□ -1.9
SPT3YDR392W FYV7Q12247 151 aa3.18□□□□□ -1.9
SPT3YDR392W RIB3Q99258 208 aa3.18□□□□□ -1.9
SPT3YDR392W MSW1P04803 379 aa3.17□□□□□ -1.9
SPT3YDR392W CDC7P06243 507 aa3.17□□□□□ -1.9
SPT3YDR392W RPS18AP0CX55 146 aaKnown RBP3.17□□□□□ -1.9
SPT3YDR392W RPS18BP0CX56 146 aaPredicted RBP3.17□□□□□ -1.9
SPT3YDR392W DEG1P31115 442 aaKnown RBP3.17□□□□□ -1.9
SPT3YDR392W LDS1P31379 325 aa3.17□□□□□ -1.9
SPT3YDR392W YBR063CP38083 404 aa3.17□□□□□ -1.9
SPT3YDR392W IKI1P38874 309 aa3.17□□□□□ -1.9
SPT3YDR392W UIP3P39547 235 aa3.17□□□□□ -1.9
SPT3YDR392W YGR201CP42936 225 aa3.17□□□□□ -1.9
SPT3YDR392W CTK2P46962 323 aa3.17□□□□□ -1.9
SPT3YDR392W PHB2P50085 310 aa3.17□□□□□ -1.9
SPT3YDR392W GTR2P53290 341 aa3.17□□□□□ -1.9
SPT3YDR392W HHO1P53551 258 aa3.17□□□□□ -1.9
SPT3YDR392W YLR345WQ06137 509 aa3.17□□□□□ -1.9
SPT3YDR392W YDL121CQ07541 149 aa3.17□□□□□ -1.9
SPT3YDR392W YPR063CQ12160 140 aa3.17□□□□□ -1.9
SPT3YDR392W YLR126CQ12288 251 aa3.17□□□□□ -1.9
SPT3YDR392W SFM1Q12314 213 aa3.17□□□□□ -1.9
SPT3YDR392W RDI1Q12434 202 aa3.17□□□□□ -1.9
SPT3YDR392W PAA1Q12447 191 aaKnown RBP3.17□□□□□ -1.9
SPT3YDR392W DFR1P07807 211 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
SPT3YDR392W RPL30P14120 105 aaKnown RBP3.16□□□□□ -1.9
SPT3YDR392W FUN14P18411 198 aa3.16□□□□□ -1.9
SPT3YDR392W SNC1P31109 117 aa3.16□□□□□ -1.9
SPT3YDR392W MRPL6P32904 214 aa3.16□□□□□ -1.9
SPT3YDR392W RTC2P38279 296 aa3.16□□□□□ -1.9
SPT3YDR392W SHG1P38337 142 aa3.16□□□□□ -1.9
SPT3YDR392W RGI1P40043 161 aaPredicted RBP3.16□□□□□ -1.9
SPT3YDR392W AGX1P43567 385 aa3.16□□□□□ -1.9
SPT3YDR392W LOC1P43586 204 aaPredicted RBP3.16□□□□□ -1.9
SPT3YDR392W LOH1P47055 219 aa3.16□□□□□ -1.9
SPT3YDR392W BAT2P47176 376 aaKnown RBP3.16□□□□□ -1.9
SPT3YDR392W DOC1P53068 250 aa3.16□□□□□ -1.9
SPT3YDR392W ERV14P53173 138 aa3.16□□□□□ -1.9
SPT3YDR392W SPR6Q01684 191 aa3.16□□□□□ -1.9
SPT3YDR392W RRN5Q02983 363 aa3.16□□□□□ -1.9
SPT3YDR392W YLR173WQ06247 608 aa3.16□□□□□ -1.9
SPT3YDR392W UAF30Q08747 228 aa3.16□□□□□ -1.9
SPT3YDR392W MDH1P17505 334 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
SPT3YDR392W ZRC1P20107 442 aa3.15□□□□□ -1.91
SPT3YDR392W RER1P25560 188 aa3.15□□□□□ -1.91
SPT3YDR392W IDH1P28834 360 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
SPT3YDR392W HOM6P31116 359 aaKnown RBP3.15□□□□□ -1.91
SPT3YDR392W SCM4P32564 187 aa3.15□□□□□ -1.91
SPT3YDR392W PMU1P36069 295 aa3.15□□□□□ -1.91
SPT3YDR392W YKL071WP36086 256 aa3.15□□□□□ -1.91
SPT3YDR392W ERV15P38312 142 aa3.15□□□□□ -1.91
SPT3YDR392W NVJ1P38881 321 aa3.15□□□□□ -1.91
SPT3YDR392W FMC1P40491 155 aa3.15□□□□□ -1.91
SPT3YDR392W MRX5P47007 382 aa3.15□□□□□ -1.91
SPT3YDR392W MRPS16Q02608 121 aa3.15□□□□□ -1.91
SPT3YDR392W MRPS17Q03246 237 aaPredicted RBP3.15□□□□□ -1.91
SPT3YDR392W JID1Q12350 301 aa3.15□□□□□ -1.91
SPT3YDR392W PRM4Q12498 284 aa3.15□□□□□ -1.91
SPT3YDR392W TAR1Q8TGM6 124 aa3.15□□□□□ -1.91
SPT3YDR392W COX5BP00425 151 aa3.14□□□□□ -1.91
SPT3YDR392W SEC59P20048 519 aa3.14□□□□□ -1.91
SPT3YDR392W DBR1P24309 405 aaKnown RBP3.14□□□□□ -1.91
SPT3YDR392W RNA15P25299 296 aaPredicted RBP3.14□□□□□ -1.91
SPT3YDR392W RHB1P25378 209 aa3.14□□□□□ -1.91
SPT3YDR392W PHO91P27514 894 aa3.14□□□□□ -1.91
SPT3YDR392W FUN19P28003 413 aaPredicted RBP3.14□□□□□ -1.91
SPT3YDR392W SRY1P36007 326 aa3.14□□□□□ -1.91
SPT3YDR392W ALP1P38971 573 aa3.14□□□□□ -1.91
SPT3YDR392W POG1P40473 351 aa3.14□□□□□ -1.91
SPT3YDR392W NAS2P40555 220 aa3.14□□□□□ -1.91
SPT3YDR392W AIM25P47140 327 aa3.14□□□□□ -1.91
SPT3YDR392W PKP2P53170 491 aa3.14□□□□□ -1.91
SPT3YDR392W PRM8P53174 237 aa3.14□□□□□ -1.91
SPT3YDR392W VOA1P53262 265 aa3.14□□□□□ -1.91
SPT3YDR392W ERV29P53337 310 aa3.14□□□□□ -1.91
SPT3YDR392W SAE3P89114 91 aa3.14□□□□□ -1.91
SPT3YDR392W YHC1Q05900 231 aaKnown RBP3.14□□□□□ -1.91
SPT3YDR392W FCF2Q12035 217 aaPredicted RBP3.14□□□□□ -1.91
SPT3YDR392W YDL199CQ12407 687 aa3.14□□□□□ -1.91
SPT3YDR392W ERG27Q12452 347 aaKnown RBP3.14□□□□□ -1.91
SPT3YDR392W YPR014CQ6B0W2 109 aa3.14□□□□□ -1.91
SPT3YDR392W YEL009C-AA0A023PZF2 135 aa3.13□□□□□ -1.91
SPT3YDR392W ARG80P07249 177 aa3.13□□□□□ -1.91
SPT3YDR392W SNF6P18888 332 aa3.13□□□□□ -1.91
SPT3YDR392W PHO80P20052 293 aa3.13□□□□□ -1.91
SPT3YDR392W PCL1P24867 279 aa3.13□□□□□ -1.91
SPT3YDR392W POF1P25576 258 aa3.13□□□□□ -1.91
SPT3YDR392W ECT1P33412 323 aa3.13□□□□□ -1.91
SPT3YDR392W SHE2P36068 246 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
SPT3YDR392W GEP4P38812 185 aa3.13□□□□□ -1.91
SPT3YDR392W YAE1P47118 141 aaPredicted RBP3.13□□□□□ -1.91
SPT3YDR392W ALG13P53178 202 aa3.13□□□□□ -1.91
SPT3YDR392W YGR017WP53210 297 aa3.13□□□□□ -1.91
SPT3YDR392W SAY1P53324 424 aa3.13□□□□□ -1.91
SPT3YDR392W SSU72P53538 206 aaPredicted RBP3.13□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 192.5 ms