RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A YGL235WP53071 178 aa-0.48□□□□□ -2.49
SDH6YDR379C-A YGL230CP53074 147 aa-0.48□□□□□ -2.49
SDH6YDR379C-A RRP17Q04031 235 aaPredicted RBP-0.48□□□□□ -2.49
SDH6YDR379C-A ROM2P51862 1356 aaKnown RBP-0.48□□□□□ -2.49
SDH6YDR379C-A SNF2P22082 1703 aa-0.49□□□□□ -2.49
SDH6YDR379C-A KIN28P06242 306 aa-0.49□□□□□ -2.49
SDH6YDR379C-A OM45P16547 393 aa-0.49□□□□□ -2.49
SDH6YDR379C-A MAG1P22134 296 aaKnown RBP-0.49□□□□□ -2.49
SDH6YDR379C-A MRPL37P36532 105 aa-0.49□□□□□ -2.49
SDH6YDR379C-A MPM1P40364 252 aa-0.49□□□□□ -2.49
SDH6YDR379C-A LIA1P47120 325 aaKnown RBP-0.49□□□□□ -2.49
SDH6YDR379C-A BXI1P48558 297 aa-0.49□□□□□ -2.49
SDH6YDR379C-A BRR6P53062 197 aa-0.49□□□□□ -2.49
SDH6YDR379C-A MRPL50P53724 139 aa-0.49□□□□□ -2.49
SDH6YDR379C-A FYV6P53913 173 aa-0.49□□□□□ -2.49
SDH6YDR379C-A COG5P53951 403 aa-0.49□□□□□ -2.49
SDH6YDR379C-A YNL033WP53964 284 aa-0.49□□□□□ -2.49
SDH6YDR379C-A HNT1Q04344 158 aaKnown RBP-0.49□□□□□ -2.49
SDH6YDR379C-A SHH3Q04487 196 aa-0.49□□□□□ -2.49
SDH6YDR379C-A DYN3Q04949 312 aa-0.49□□□□□ -2.49
SDH6YDR379C-A GGA1Q06336 557 aa-0.49□□□□□ -2.49
SDH6YDR379C-A YNG1Q08465 219 aa-0.49□□□□□ -2.49
SDH6YDR379C-A YAR023CD6VPM8 179 aa-0.5□□□□□ -2.49
SDH6YDR379C-A RPS22AP0C0W1 130 aaKnown RBP-0.5□□□□□ -2.49
SDH6YDR379C-A YPK2P18961 677 aa-0.5□□□□□ -2.49
SDH6YDR379C-A RPO26P20435 155 aa-0.5□□□□□ -2.49
SDH6YDR379C-A YCR090CP25654 182 aaKnown RBP-0.5□□□□□ -2.49
SDH6YDR379C-A PAM17P36147 197 aa-0.5□□□□□ -2.49
SDH6YDR379C-A ERV25P54837 211 aaKnown RBP-0.5□□□□□ -2.49
SDH6YDR379C-A MGR2Q02889 113 aa-0.5□□□□□ -2.49
SDH6YDR379C-A YOR072WQ08486 104 aa-0.5□□□□□ -2.49
SDH6YDR379C-A FCY1Q12178 158 aa-0.5□□□□□ -2.49
SDH6YDR379C-A ADF1Q2V2Q1 113 aa-0.5□□□□□ -2.49
SDH6YDR379C-A YMR030W-AQ3E760 96 aa-0.5□□□□□ -2.49
SDH6YDR379C-A RPS22BQ3E7Y3 130 aaKnown RBP-0.5□□□□□ -2.49
SDH6YDR379C-A YLR422WQ06409 1932 aa-0.5□□□□□ -2.49
SDH6YDR379C-A SNF4P12904 322 aa-0.51□□□□□ -2.49
SDH6YDR379C-A PRE1P22141 198 aaKnown RBP-0.51□□□□□ -2.49
SDH6YDR379C-A ASF2P32448 525 aaPredicted RBP-0.51□□□□□ -2.49
SDH6YDR379C-A YER134CP40081 178 aa-0.51□□□□□ -2.49
SDH6YDR379C-A PDS1P40316 373 aaPredicted RBP-0.51□□□□□ -2.49
SDH6YDR379C-A POG1P40473 351 aa-0.51□□□□□ -2.49
SDH6YDR379C-A CIN5P40917 295 aa-0.51□□□□□ -2.49
SDH6YDR379C-A ERG10P41338 398 aaKnown RBP-0.51□□□□□ -2.49
SDH6YDR379C-A YMR099CQ03161 297 aaKnown RBP-0.51□□□□□ -2.49
SDH6YDR379C-A PAM18Q07914 168 aa-0.51□□□□□ -2.49
SDH6YDR379C-A RRT8Q08219 342 aa-0.51□□□□□ -2.49
SDH6YDR379C-A YOR015WQ12169 119 aa-0.51□□□□□ -2.49
SDH6YDR379C-A YOR342CQ12182 319 aa-0.51□□□□□ -2.49
SDH6YDR379C-A DGK1Q12382 290 aa-0.51□□□□□ -2.49
SDH6YDR379C-A ATG31Q12421 196 aa-0.51□□□□□ -2.49
SDH6YDR379C-A YHR214C-EQ8TGK0 99 aa-0.51□□□□□ -2.49
SDH6YDR379C-A LAA1P39526 2014 aa-0.52□□□□□ -2.49
SDH6YDR379C-A GSC2P40989 1895 aa-0.52□□□□□ -2.49
SDH6YDR379C-A RPL25P04456 142 aaKnown RBP-0.52□□□□□ -2.49
SDH6YDR379C-A MAK31P23059 88 aa-0.52□□□□□ -2.49
SDH6YDR379C-A ADE1P27616 306 aa-0.52□□□□□ -2.49
SDH6YDR379C-A SSO1P32867 290 aa-0.52□□□□□ -2.49
SDH6YDR379C-A BMH2P34730 273 aaKnown RBP-0.52□□□□□ -2.49
SDH6YDR379C-A HTD2P38790 280 aaKnown RBP-0.52□□□□□ -2.49
SDH6YDR379C-A YHR140WP38842 239 aa-0.52□□□□□ -2.49
SDH6YDR379C-A MTW1P39731 289 aa-0.52□□□□□ -2.49
SDH6YDR379C-A SER2P42941 309 aa-0.52□□□□□ -2.49
SDH6YDR379C-A MIC26P50087 233 aa-0.52□□□□□ -2.49
SDH6YDR379C-A LSM7P53905 115 aaKnown RBP-0.52□□□□□ -2.49
SDH6YDR379C-A MYO1P08964 1928 aa-0.53□□□□□ -2.49
SDH6YDR379C-A HAP2P06774 265 aa-0.53□□□□□ -2.49
SDH6YDR379C-A TIR1P10863 254 aa-0.53□□□□□ -2.49
SDH6YDR379C-A GCN3P14741 305 aa-0.53□□□□□ -2.49
SDH6YDR379C-A IDP1P21954 428 aaKnown RBP-0.53□□□□□ -2.49
SDH6YDR379C-A OPI1P21957 404 aa-0.53□□□□□ -2.49
SDH6YDR379C-A MGT1P26188 188 aa-0.53□□□□□ -2.49
SDH6YDR379C-A UBC6P33296 250 aaPredicted RBP-0.53□□□□□ -2.49
SDH6YDR379C-A RIB7P33312 244 aa-0.53□□□□□ -2.49
SDH6YDR379C-A CLG1P35190 452 aa-0.53□□□□□ -2.49
SDH6YDR379C-A HMF1P40037 129 aaKnown RBP-0.53□□□□□ -2.49
SDH6YDR379C-A CCS1P40202 249 aaKnown RBP-0.53□□□□□ -2.49
SDH6YDR379C-A RFC2P40348 353 aa-0.53□□□□□ -2.49
SDH6YDR379C-A CUP9P41817 306 aa-0.53□□□□□ -2.49
SDH6YDR379C-A SKI6P46948 246 aaPredicted RBP-0.53□□□□□ -2.49
SDH6YDR379C-A YNL122CP53921 115 aaPredicted RBP-0.53□□□□□ -2.49
SDH6YDR379C-A YHP1Q04116 353 aa-0.53□□□□□ -2.49
SDH6YDR379C-A YMR253CQ04835 414 aa-0.53□□□□□ -2.49
SDH6YDR379C-A YOL107WQ12239 342 aa-0.53□□□□□ -2.49
SDH6YDR379C-A YOR034C-AQ3E735 80 aa-0.53□□□□□ -2.49
SDH6YDR379C-A FAS2P19097 1887 aaKnown RBP-0.53□□□□□ -2.49
SDH6YDR379C-A YDR157WA0A023PZE8 133 aa-0.54□□□□□ -2.5
SDH6YDR379C-A AIM2P39721 246 aa-0.54□□□□□ -2.5
SDH6YDR379C-A SPC25P40014 221 aa-0.54□□□□□ -2.5
SDH6YDR379C-A COX15P40086 486 aa-0.54□□□□□ -2.5
SDH6YDR379C-A NSE4P43124 402 aa-0.54□□□□□ -2.5
SDH6YDR379C-A RPC17P47076 161 aa-0.54□□□□□ -2.5
SDH6YDR379C-A GPI14P47088 403 aaKnown RBP-0.54□□□□□ -2.5
SDH6YDR379C-A CCC1P47818 322 aa-0.54□□□□□ -2.5
SDH6YDR379C-A ALG13P53178 202 aa-0.54□□□□□ -2.5
SDH6YDR379C-A HHT1P61830 136 aa-0.54□□□□□ -2.5
SDH6YDR379C-A PIR1Q03178 341 aa-0.54□□□□□ -2.5
SDH6YDR379C-A BNI1P41832 1953 aa-0.54□□□□□ -2.5
SDH6YDR379C-A RHO1P06780 209 aaKnown RBP-0.55□□□□□ -2.5
SDH6YDR379C-A STE18P18852 110 aa-0.55□□□□□ -2.5
Retrieved 100 of 5,963 RNA–protein pairs in 57.9 ms