RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C SNC2P33328 115 aa2.74□□□□□ -1.97
CDC40YDR364C CLG1P35190 452 aa2.74□□□□□ -1.97
CDC40YDR364C SRL3P36167 246 aa2.74□□□□□ -1.97
CDC40YDR364C MRPL39P36533 70 aa2.74□□□□□ -1.97
CDC40YDR364C YBR096WP38256 230 aa2.74□□□□□ -1.97
CDC40YDR364C YPC1P38298 316 aa2.74□□□□□ -1.97
CDC40YDR364C PEX22P39718 180 aa2.74□□□□□ -1.97
CDC40YDR364C PHB1P40961 287 aa2.74□□□□□ -1.97
CDC40YDR364C SYS1P41544 203 aa2.74□□□□□ -1.97
CDC40YDR364C CIN2P46670 268 aa2.74□□□□□ -1.97
CDC40YDR364C YGR042WP53227 271 aa2.74□□□□□ -1.97
CDC40YDR364C MRPS16Q02608 121 aa2.74□□□□□ -1.97
CDC40YDR364C GAS2Q06135 555 aa2.74□□□□□ -1.97
CDC40YDR364C KEI1Q06346 221 aa2.74□□□□□ -1.97
CDC40YDR364C HEM25Q07534 307 aa2.74□□□□□ -1.97
CDC40YDR364C FRE8Q12209 686 aa2.74□□□□□ -1.97
CDC40YDR364C MCT1Q12283 360 aa2.74□□□□□ -1.97
CDC40YDR364C YDL180WQ12301 547 aa2.74□□□□□ -1.97
CDC40YDR364C MEC1P38111 2368 aa2.73□□□□□ -1.97
CDC40YDR364C CYC3P06182 269 aa2.73□□□□□ -1.97
CDC40YDR364C DSF1P0CX08 502 aa2.73□□□□□ -1.97
CDC40YDR364C YNR073CP0CX09 502 aa2.73□□□□□ -1.97
CDC40YDR364C GRX2P17695 143 aaKnown RBP2.73□□□□□ -1.97
CDC40YDR364C PCL1P24867 279 aa2.73□□□□□ -1.97
CDC40YDR364C RNA14P25298 677 aaKnown RBP2.73□□□□□ -1.97
CDC40YDR364C POF1P25576 258 aa2.73□□□□□ -1.97
CDC40YDR364C YBL010CP32788 280 aa2.73□□□□□ -1.97
CDC40YDR364C MCH2P36032 473 aa2.73□□□□□ -1.97
CDC40YDR364C CBT1P36038 271 aaPredicted RBP2.73□□□□□ -1.97
CDC40YDR364C UTP30P36144 274 aaKnown RBP2.73□□□□□ -1.97
CDC40YDR364C YND1P40009 630 aa2.73□□□□□ -1.97
CDC40YDR364C IDP2P41939 412 aa2.73□□□□□ -1.97
CDC40YDR364C YJR012CP47087 207 aa2.73□□□□□ -1.97
CDC40YDR364C GPI14P47088 403 aaKnown RBP2.73□□□□□ -1.97
CDC40YDR364C BXI1P48558 297 aa2.73□□□□□ -1.97
CDC40YDR364C FMP48P53233 369 aa2.73□□□□□ -1.97
CDC40YDR364C BUD25P85052 153 aa2.73□□□□□ -1.97
CDC40YDR364C UTP15Q04305 513 aaKnown RBP2.73□□□□□ -1.97
CDC40YDR364C HNT1Q04344 158 aaKnown RBP2.73□□□□□ -1.97
CDC40YDR364C ERP1Q05359 219 aaKnown RBP2.73□□□□□ -1.97
CDC40YDR364C YLR031WQ07978 186 aa2.73□□□□□ -1.97
CDC40YDR364C RDI1Q12434 202 aa2.73□□□□□ -1.97
CDC40YDR364C ODC2Q99297 307 aa2.73□□□□□ -1.97
CDC40YDR364C SLH1P53327 1967 aaKnown RBP2.72□□□□□ -1.97
CDC40YDR364C SAL1D6W196 494 aa2.72□□□□□ -1.97
CDC40YDR364C RNA15P25299 296 aaPredicted RBP2.72□□□□□ -1.97
CDC40YDR364C CPR4P25334 318 aa2.72□□□□□ -1.97
CDC40YDR364C SPT4P32914 102 aaPredicted RBP2.72□□□□□ -1.97
CDC40YDR364C PRS2P38620 318 aaKnown RBP2.72□□□□□ -1.97
CDC40YDR364C VMA22P38784 181 aa2.72□□□□□ -1.97
CDC40YDR364C PRM5P40476 318 aa2.72□□□□□ -1.97
CDC40YDR364C AVT7P40501 490 aa2.72□□□□□ -1.97
CDC40YDR364C MOB2P43563 287 aa2.72□□□□□ -1.97
CDC40YDR364C UBC13P52490 153 aa2.72□□□□□ -1.97
CDC40YDR364C YGL159WP53110 370 aa2.72□□□□□ -1.97
CDC40YDR364C RNH201P53942 307 aa2.72□□□□□ -1.97
CDC40YDR364C SUR7P54003 302 aa2.72□□□□□ -1.97
CDC40YDR364C IZH2Q12442 317 aa2.72□□□□□ -1.97
CDC40YDR364C COX5BP00425 151 aa2.71□□□□□ -1.98
CDC40YDR364C RPL30P14120 105 aaKnown RBP2.71□□□□□ -1.98
CDC40YDR364C URA6P15700 204 aa2.71□□□□□ -1.98
CDC40YDR364C MIR1P23641 311 aaKnown RBP2.71□□□□□ -1.98
CDC40YDR364C RFA3P26755 122 aaKnown RBP2.71□□□□□ -1.98
CDC40YDR364C MRP17P28778 131 aa2.71□□□□□ -1.98
CDC40YDR364C PAN3P36102 679 aaPredicted RBP2.71□□□□□ -1.98
CDC40YDR364C UMP1P38293 148 aa2.71□□□□□ -1.98
CDC40YDR364C YER137CP40083 148 aaKnown RBP2.71□□□□□ -1.98
CDC40YDR364C YJL213WP40896 331 aa2.71□□□□□ -1.98
CDC40YDR364C LSM1P47017 172 aaKnown RBP2.71□□□□□ -1.98
CDC40YDR364C RSM27P53305 110 aa2.71□□□□□ -1.98
CDC40YDR364C CWC25P53854 179 aaKnown RBP2.71□□□□□ -1.98
CDC40YDR364C RCE1Q03530 315 aa2.71□□□□□ -1.98
CDC40YDR364C FSH2Q05015 223 aa2.71□□□□□ -1.98
CDC40YDR364C RAF1Q06891 181 aa2.71□□□□□ -1.98
CDC40YDR364C MRX9Q07349 420 aaKnown RBP2.71□□□□□ -1.98
CDC40YDR364C USB1Q12208 290 aaKnown RBP2.71□□□□□ -1.98
CDC40YDR364C YMR31P19955 123 aa2.7□□□□□ -1.98
CDC40YDR364C MRPL20P22354 195 aaPredicted RBP2.7□□□□□ -1.98
CDC40YDR364C FMT1P32785 401 aa2.7□□□□□ -1.98
CDC40YDR364C PDC2P32896 925 aa2.7□□□□□ -1.98
CDC40YDR364C YER084WP40057 128 aa2.7□□□□□ -1.98
CDC40YDR364C COX15P40086 486 aa2.7□□□□□ -1.98
CDC40YDR364C GNA1P43577 159 aaPredicted RBP2.7□□□□□ -1.98
CDC40YDR364C YJR085CP47131 105 aaKnown RBP2.7□□□□□ -1.98
CDC40YDR364C NSA1P53136 463 aaPredicted RBP2.7□□□□□ -1.98
CDC40YDR364C ALG9P53868 555 aaKnown RBP2.7□□□□□ -1.98
CDC40YDR364C YML018CQ03730 393 aa2.7□□□□□ -1.98
CDC40YDR364C PLP1Q04004 230 aa2.7□□□□□ -1.98
CDC40YDR364C GMC1Q04399 608 aa2.7□□□□□ -1.98
CDC40YDR364C COA4Q05809 96 aa2.7□□□□□ -1.98
CDC40YDR364C RFU1Q08003 200 aa2.7□□□□□ -1.98
CDC40YDR364C YOR385WQ08909 290 aa2.7□□□□□ -1.98
CDC40YDR364C PRM4Q12498 284 aa2.7□□□□□ -1.98
CDC40YDR364C HUT1Q12520 339 aa2.7□□□□□ -1.98
CDC40YDR364C FOL3Q12676 427 aaPredicted RBP2.7□□□□□ -1.98
CDC40YDR364C PET20Q99373 253 aa2.7□□□□□ -1.98
CDC40YDR364C REP2P03872 296 aa2.69□□□□□ -1.98
CDC40YDR364C YBR121C-AP0C5L4 52 aa2.69□□□□□ -1.98
CDC40YDR364C RPL35AP0CX84 120 aaKnown RBP2.69□□□□□ -1.98
CDC40YDR364C RPL35BP0CX85 120 aaKnown RBP2.69□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 73.7 ms