RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C RNH202Q05635 350 aa0.48□□□□□ -2.33
SNU56YDR240C ARO7P32178 256 aa0.48□□□□□ -2.33
SNU56YDR240C SFK1P35735 353 aa0.48□□□□□ -2.33
SNU56YDR240C YER134CP40081 178 aa0.48□□□□□ -2.33
SNU56YDR240C YMR295CQ03559 197 aa0.48□□□□□ -2.33
SNU56YDR240C YLR422WQ06409 1932 aa0.47□□□□□ -2.33
SNU56YDR240C MER1P16523 270 aa0.47□□□□□ -2.33
SNU56YDR240C ERG28P40030 148 aa0.47□□□□□ -2.33
SNU56YDR240C YIL102CP40488 101 aa0.47□□□□□ -2.33
SNU56YDR240C YPR013CQ12145 317 aa0.47□□□□□ -2.33
SNU56YDR240C BMH2P34730 273 aaKnown RBP0.46□□□□□ -2.34
SNU56YDR240C SKI6P46948 246 aaPredicted RBP0.46□□□□□ -2.34
SNU56YDR240C YAR023CD6VPM8 179 aa0.45□□□□□ -2.34
SNU56YDR240C SEN2P16658 377 aa0.45□□□□□ -2.34
SNU56YDR240C CNB1P25296 175 aa0.45□□□□□ -2.34
SNU56YDR240C AIM2P39721 246 aa0.45□□□□□ -2.34
SNU56YDR240C OTU1P43558 301 aa0.45□□□□□ -2.34
SNU56YDR240C SHH3Q04487 196 aa0.45□□□□□ -2.34
SNU56YDR240C GGA1Q06336 557 aa0.45□□□□□ -2.34
SNU56YDR240C NHP6BP11633 99 aaKnown RBP0.44□□□□□ -2.34
SNU56YDR240C AHT1P29589 182 aa0.44□□□□□ -2.34
SNU56YDR240C SER2P42941 309 aa0.44□□□□□ -2.34
SNU56YDR240C MET31Q03081 177 aa0.44□□□□□ -2.34
SNU56YDR240C FUS2Q05670 677 aa0.44□□□□□ -2.34
SNU56YDR240C STE18P18852 110 aa0.43□□□□□ -2.34
SNU56YDR240C GSP2P32836 220 aaKnown RBP0.43□□□□□ -2.34
SNU56YDR240C YCR087C-AP37263 153 aa0.43□□□□□ -2.34
SNU56YDR240C YHL037CP38733 133 aa0.43□□□□□ -2.34
SNU56YDR240C RTR1P40084 226 aaPredicted RBP0.43□□□□□ -2.34
SNU56YDR240C YNL194CP40169 301 aa0.43□□□□□ -2.34
SNU56YDR240C ABP140Q08641 628 aaKnown RBP0.43□□□□□ -2.34
SNU56YDR240C CCW12Q12127 133 aa0.43□□□□□ -2.34
SNU56YDR240C RIF1P29539 1916 aa0.43□□□□□ -2.34
SNU56YDR240C DUR1,2P32528 1835 aaKnown RBP0.43□□□□□ -2.34
SNU56YDR240C MAK5P38112 773 aaPredicted RBP0.42□□□□□ -2.34
SNU56YDR240C MTW1P39731 289 aa0.42□□□□□ -2.34
SNU56YDR240C FYV12Q08559 129 aa0.42□□□□□ -2.34
SNU56YDR240C SPS18P32572 300 aa0.41□□□□□ -2.34
SNU56YDR240C RAD17P48581 401 aa0.41□□□□□ -2.34
SNU56YDR240C YNL033WP53964 284 aa0.41□□□□□ -2.34
SNU56YDR240C YMR099CQ03161 297 aaKnown RBP0.41□□□□□ -2.34
SNU56YDR240C TAR1Q8TGM6 124 aa0.41□□□□□ -2.34
SNU56YDR240C YDR157WA0A023PZE8 133 aa0.41□□□□□ -2.34
SNU56YDR240C PRP18P33411 251 aaPredicted RBP0.41□□□□□ -2.34
SNU56YDR240C ARP3P47117 449 aaKnown RBP0.41□□□□□ -2.34
SNU56YDR240C CWC23P52868 283 aaPredicted RBP0.41□□□□□ -2.34
SNU56YDR240C GET4Q12125 312 aa0.41□□□□□ -2.34
SNU56YDR240C CBT1P36038 271 aaPredicted RBP0.4□□□□□ -2.35
SNU56YDR240C PAM17P36147 197 aa0.4□□□□□ -2.35
SNU56YDR240C YAR064WP39563 99 aa0.4□□□□□ -2.35
SNU56YDR240C YFL051CP43552 160 aa0.4□□□□□ -2.35
SNU56YDR240C DCV1P43595 202 aa0.4□□□□□ -2.35
SNU56YDR240C VPS71Q03433 280 aa0.4□□□□□ -2.35
SNU56YDR240C MBF1O14467 151 aaKnown RBP0.39□□□□□ -2.35
SNU56YDR240C SNF4P12904 322 aa0.39□□□□□ -2.35
SNU56YDR240C COQ1P18900 473 aa0.39□□□□□ -2.35
SNU56YDR240C YCR023CP25351 611 aa0.39□□□□□ -2.35
SNU56YDR240C MGT1P26188 188 aa0.39□□□□□ -2.35
SNU56YDR240C IKI1P38874 309 aa0.39□□□□□ -2.35
SNU56YDR240C CUP9P41817 306 aa0.39□□□□□ -2.35
SNU56YDR240C RRP17Q04031 235 aaPredicted RBP0.39□□□□□ -2.35
SNU56YDR240C FIT1Q04433 528 aa0.39□□□□□ -2.35
SNU56YDR240C TIR1P10863 254 aa0.38□□□□□ -2.35
SNU56YDR240C ASF2P32448 525 aaPredicted RBP0.38□□□□□ -2.35
SNU56YDR240C TAF14P35189 244 aa0.38□□□□□ -2.35
SNU56YDR240C PDS1P40316 373 aaPredicted RBP0.38□□□□□ -2.35
SNU56YDR240C YMR315WQ04869 349 aaKnown RBP0.38□□□□□ -2.35
SNU56YDR240C YLR036CQ07986 203 aa0.38□□□□□ -2.35
SNU56YDR240C CDC33P07260 213 aaKnown RBP0.37□□□□□ -2.35
SNU56YDR240C IDP1P21954 428 aaKnown RBP0.37□□□□□ -2.35
SNU56YDR240C YMR253CQ04835 414 aa0.37□□□□□ -2.35
SNU56YDR240C YLR031WQ07978 186 aa0.37□□□□□ -2.35
SNU56YDR240C PST2Q12335 198 aaKnown RBP0.37□□□□□ -2.35
SNU56YDR240C ADF1Q2V2Q1 113 aa0.37□□□□□ -2.35
SNU56YDR240C YBL010CP32788 280 aa0.36□□□□□ -2.35
SNU56YDR240C YOR015WQ12169 119 aa0.36□□□□□ -2.35
SNU56YDR240C STF2P16965 84 aa0.35□□□□□ -2.35
SNU56YDR240C SPC25P40014 221 aa0.35□□□□□ -2.35
SNU56YDR240C RFC4P40339 323 aaKnown RBP0.35□□□□□ -2.35
SNU56YDR240C TDA4P47153 279 aa0.35□□□□□ -2.35
SNU56YDR240C SBH2P52871 88 aa0.35□□□□□ -2.35
SNU56YDR240C NAT3Q06504 195 aa0.35□□□□□ -2.35
SNU56YDR240C YOL014WQ08110 124 aa0.35□□□□□ -2.35
SNU56YDR240C ETR1P38071 380 aa0.35□□□□□ -2.35
SNU56YDR240C MSS2P40990 351 aa0.35□□□□□ -2.35
SNU56YDR240C GCN20P43535 752 aaKnown RBP0.35□□□□□ -2.35
SNU56YDR240C YJR015WP47090 510 aa0.35□□□□□ -2.35
SNU56YDR240C YML100W-AQ8TGT0 57 aa0.35□□□□□ -2.35
SNU56YDR240C MPM1P40364 252 aa0.34□□□□□ -2.36
SNU56YDR240C YGL235WP53071 178 aa0.34□□□□□ -2.36
SNU56YDR240C RPS24AP0CX31 135 aaKnown RBP0.33□□□□□ -2.36
SNU56YDR240C RPS24BP0CX32 135 aaKnown RBP0.33□□□□□ -2.36
SNU56YDR240C RFA3P26755 122 aaKnown RBP0.33□□□□□ -2.36
SNU56YDR240C TMA22P47089 198 aaPredicted RBP0.33□□□□□ -2.36
SNU56YDR240C SED1Q01589 338 aa0.33□□□□□ -2.36
SNU56YDR240C DGK1Q12382 290 aa0.33□□□□□ -2.36
SNU56YDR240C YMR030W-AQ3E760 96 aa0.33□□□□□ -2.36
SNU56YDR240C MRS1P07266 363 aa0.32□□□□□ -2.36
SNU56YDR240C FMP23P38231 175 aa0.32□□□□□ -2.36
SNU56YDR240C YJR111CP47148 283 aaKnown RBP0.32□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 76.8 ms